RNA–Protein interactions for RNA: ENST00000494065.2

DEPDC5-220, Transcript of DEP domain containing 5, humanhuman

TSL 3

Gene DEPDC5, Length 414 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-220ENST00000494065 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
DEPDC5-220ENST00000494065 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
DEPDC5-220ENST00000494065 PHF23Q9BUL5 403 aaPredicted RBP20.82■□□□□ 0.92
DEPDC5-220ENST00000494065 SENP3Q9H4L4 574 aaPredicted RBP20.62■□□□□ 0.89
DEPDC5-220ENST00000494065 NISCHQ9Y2I1 1504 aa19.98■□□□□ 0.79
DEPDC5-220ENST00000494065 PLPPR3Q6T4P5 718 aa19.29■□□□□ 0.68
DEPDC5-220ENST00000494065 FOXD1Q16676 465 aa19.07■□□□□ 0.64
DEPDC5-220ENST00000494065 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
DEPDC5-220ENST00000494065 ADRA2BP18089 450 aa18.29■□□□□ 0.52
DEPDC5-220ENST00000494065 CCDC180Q9P1Z9 1646 aa17.99■□□□□ 0.47
DEPDC5-220ENST00000494065 PIAS4Q8N2W9 510 aaPredicted RBP17.98■□□□□ 0.47
DEPDC5-220ENST00000494065 ABCC9O60706 1549 aa17.73■□□□□ 0.43
DEPDC5-220ENST00000494065 MSH5O43196 834 aa17.66■□□□□ 0.42
DEPDC5-220ENST00000494065 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.32
DEPDC5-220ENST00000494065 PPP4R3CPQ6ZMV5 832 aa16.95■□□□□ 0.3
DEPDC5-220ENST00000494065 NACADO15069 1562 aa16.94■□□□□ 0.3
DEPDC5-220ENST00000494065 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
DEPDC5-220ENST00000494065 MYO15BQ96JP2 1530 aa16.76■□□□□ 0.27
DEPDC5-220ENST00000494065 DCAF8L2P0C7V8 631 aa16.65■□□□□ 0.26
DEPDC5-220ENST00000494065 ZCCHC6Q5VYS8 1495 aaKnown RBP16.63■□□□□ 0.25
DEPDC5-220ENST00000494065 UNC13AQ9UPW8 1703 aa16.59■□□□□ 0.25
DEPDC5-220ENST00000494065 DCAF1Q9Y4B6 1507 aa16.58■□□□□ 0.24
DEPDC5-220ENST00000494065 MAPK8IP2Q13387 824 aaPredicted RBP16.56■□□□□ 0.24
DEPDC5-220ENST00000494065 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
DEPDC5-220ENST00000494065 KCNA4P22459 653 aa16.55■□□□□ 0.24
DEPDC5-220ENST00000494065 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.24
DEPDC5-220ENST00000494065 DMRT2Q9Y5R5 561 aa16.46■□□□□ 0.23
DEPDC5-220ENST00000494065 BICRAQ9NZM4 1560 aa16.46■□□□□ 0.23
DEPDC5-220ENST00000494065 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
DEPDC5-220ENST00000494065 SHROOM4Q9ULL8 1493 aa16.41■□□□□ 0.22
DEPDC5-220ENST00000494065 DNAJC5BQ9UF47 199 aa16.38■□□□□ 0.21
DEPDC5-220ENST00000494065 SCRIBQ14160 1630 aa16.32■□□□□ 0.2
DEPDC5-220ENST00000494065 NPM3O75607 178 aaKnown RBP16.28■□□□□ 0.2
DEPDC5-220ENST00000494065 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
DEPDC5-220ENST00000494065 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
DEPDC5-220ENST00000494065 EIF4G1Q04637 1599 aaKnown RBP16.08■□□□□ 0.16
DEPDC5-220ENST00000494065 CC2D2AQ9P2K1 1620 aa16.06■□□□□ 0.16
DEPDC5-220ENST00000494065 CECR2Q9BXF3 1484 aa15.99■□□□□ 0.15
DEPDC5-220ENST00000494065 POTEDQ86YR6 584 aa15.96■□□□□ 0.15
DEPDC5-220ENST00000494065 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
DEPDC5-220ENST00000494065 SMARCA4P51532 1647 aa15.6■□□□□ 0.09
DEPDC5-220ENST00000494065 DCAF8L1A6NGE4 600 aa15.59■□□□□ 0.09
DEPDC5-220ENST00000494065 NCAPD3P42695 1498 aa15.58■□□□□ 0.08
DEPDC5-220ENST00000494065 SMARCA2P51531 1590 aa15.58■□□□□ 0.08
DEPDC5-220ENST00000494065 BAZ1AQ9NRL2 1556 aaPredicted RBP15.55■□□□□ 0.08
DEPDC5-220ENST00000494065 HMGXB3Q12766 1538 aa15.55■□□□□ 0.08
DEPDC5-220ENST00000494065 ATAD2BQ9ULI0 1458 aa15.54■□□□□ 0.08
DEPDC5-220ENST00000494065 PEG3Q9GZU2 1588 aa15.46■□□□□ 0.07
DEPDC5-220ENST00000494065 BAZ1BQ9UIG0 1483 aaKnown RBP15.44■□□□□ 0.06
DEPDC5-220ENST00000494065 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
DEPDC5-220ENST00000494065 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
DEPDC5-220ENST00000494065 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
DEPDC5-220ENST00000494065 CUX2O14529 1486 aa15.33■□□□□ 0.04
DEPDC5-220ENST00000494065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.04
DEPDC5-220ENST00000494065 FOXD4L1Q9NU39 408 aa15.29■□□□□ 0.04
DEPDC5-220ENST00000494065 EHMT2Q96KQ7 1210 aa15.27■□□□□ 0.04
DEPDC5-220ENST00000494065 LAMC3Q9Y6N6 1575 aa15.27■□□□□ 0.03
DEPDC5-220ENST00000494065 NESP48681 1621 aa15.24■□□□□ 0.03
DEPDC5-220ENST00000494065 ZBTB22O15209 634 aa15.23■□□□□ 0.03
DEPDC5-220ENST00000494065 WIZO95785 1651 aa15.19■□□□□ 0.02
DEPDC5-220ENST00000494065 THOC2Q8NI27 1593 aaKnown RBP15.17■□□□□ 0.02
DEPDC5-220ENST00000494065 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
DEPDC5-220ENST00000494065 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
DEPDC5-220ENST00000494065 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
DEPDC5-220ENST00000494065 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
DEPDC5-220ENST00000494065 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
DEPDC5-220ENST00000494065 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
DEPDC5-220ENST00000494065 CADPSQ9ULU8 1353 aa15.09■□□□□ 0.01
DEPDC5-220ENST00000494065 TOP2AP11388 1531 aaKnown RBP15.08■□□□□ 0.01
DEPDC5-220ENST00000494065 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0
DEPDC5-220ENST00000494065 DNAJC5Q9H3Z4 198 aa15.04■□□□□ -0
DEPDC5-220ENST00000494065 MRC2Q9UBG0 1479 aa15.02■□□□□ -0
DEPDC5-220ENST00000494065 WDR62O43379 1518 aa14.99□□□□□ -0.01
DEPDC5-220ENST00000494065 CEP164Q9UPV0 1460 aa14.99□□□□□ -0.01
DEPDC5-220ENST00000494065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
DEPDC5-220ENST00000494065 HNRNPUL2Q1KMD3 747 aaKnown RBP14.98□□□□□ -0.01
DEPDC5-220ENST00000494065 CFTRP13569 1480 aa14.96□□□□□ -0.01
DEPDC5-220ENST00000494065 C1QBPQ07021 282 aaKnown RBP14.96□□□□□ -0.01
DEPDC5-220ENST00000494065 FANCD2Q9BXW9 1451 aa14.95□□□□□ -0.02
DEPDC5-220ENST00000494065 PRDM2Q13029 1718 aa14.93□□□□□ -0.02
DEPDC5-220ENST00000494065 SAMD1Q6SPF0 538 aaPredicted RBP14.91□□□□□ -0.02
DEPDC5-220ENST00000494065 ATXN8OSP0DMR3 200 aa14.83□□□□□ -0.04
DEPDC5-220ENST00000494065 APLP2Q06481 763 aa14.83□□□□□ -0.04
DEPDC5-220ENST00000494065 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
DEPDC5-220ENST00000494065 URB2Q14146 1524 aaKnown RBP14.8□□□□□ -0.04
DEPDC5-220ENST00000494065 ABCC8Q09428 1581 aa14.7□□□□□ -0.06
DEPDC5-220ENST00000494065 TOPBP1Q92547 1522 aa14.68□□□□□ -0.06
DEPDC5-220ENST00000494065 IFT140Q96RY7 1462 aa14.68□□□□□ -0.06
DEPDC5-220ENST00000494065 DNMBPQ6XZF7 1577 aa14.68□□□□□ -0.06
DEPDC5-220ENST00000494065 CACNB1Q02641 598 aaPredicted RBP14.62□□□□□ -0.07
DEPDC5-220ENST00000494065 SPINK5Q9NQ38 1064 aaPredicted RBP14.6□□□□□ -0.07
DEPDC5-220ENST00000494065 EIF4G3O43432 1585 aaKnown RBP14.59□□□□□ -0.07
DEPDC5-220ENST00000494065 ZNF219Q9P2Y4 722 aaPredicted RBP14.58□□□□□ -0.08
DEPDC5-220ENST00000494065 ATF5Q9Y2D1 282 aaPredicted RBP14.58□□□□□ -0.08
DEPDC5-220ENST00000494065 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
DEPDC5-220ENST00000494065 CAPN15O75808 1086 aa14.54□□□□□ -0.08
DEPDC5-220ENST00000494065 TARBP1Q13395 1621 aaKnown RBP14.54□□□□□ -0.08
DEPDC5-220ENST00000494065 POLA1P09884 1462 aaPredicted RBP14.53□□□□□ -0.08
DEPDC5-220ENST00000494065 OSCARQ8IYS5 282 aa14.52□□□□□ -0.09
DEPDC5-220ENST00000494065 WDR97A6NE52 1622 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms