RNA–Protein interactions for RNA: ENST00000493827.2

CHRNA10-202, Transcript of cholinergic receptor nicotinic alpha 10 subunit, humanhuman

TSL 2

Gene CHRNA10, Length 1,005 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA10-202ENST00000493827 AEBP2Q6ZN18 517 aaPredicted RBP29.2■■■□□ 2.26
CHRNA10-202ENST00000493827 CHIC1Q5VXU3 224 aa28.18■■■□□ 2.1
CHRNA10-202ENST00000493827 SENP3Q9H4L4 574 aaPredicted RBP24.97■■□□□ 1.59
CHRNA10-202ENST00000493827 PHF23Q9BUL5 403 aaPredicted RBP24.66■■□□□ 1.54
CHRNA10-202ENST00000493827 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
CHRNA10-202ENST00000493827 FOXD1Q16676 465 aa23.14■■□□□ 1.29
CHRNA10-202ENST00000493827 PLPPR3Q6T4P5 718 aa22.74■■□□□ 1.23
CHRNA10-202ENST00000493827 PPP6R1Q9UPN7 881 aa21.87■■□□□ 1.09
CHRNA10-202ENST00000493827 ADRA2BP18089 450 aa21.85■■□□□ 1.09
CHRNA10-202ENST00000493827 PIAS4Q8N2W9 510 aaPredicted RBP21.76■■□□□ 1.07
CHRNA10-202ENST00000493827 MSH5O43196 834 aa21.61■■□□□ 1.05
CHRNA10-202ENST00000493827 POTEDQ86YR6 584 aa21.59■■□□□ 1.05
CHRNA10-202ENST00000493827 CCDC180Q9P1Z9 1646 aa21.11■□□□□ 0.97
CHRNA10-202ENST00000493827 ABCC9O60706 1549 aa20.81■□□□□ 0.92
CHRNA10-202ENST00000493827 SCAF1Q9H7N4 1312 aaKnown RBP20.14■□□□□ 0.81
CHRNA10-202ENST00000493827 PPP4R3CPQ6ZMV5 832 aa19.93■□□□□ 0.78
CHRNA10-202ENST00000493827 RB1CC1Q8TDY2 1594 aa19.92■□□□□ 0.78
CHRNA10-202ENST00000493827 MAPK8IP2Q13387 824 aaPredicted RBP19.91■□□□□ 0.78
CHRNA10-202ENST00000493827 NACADO15069 1562 aa19.86■□□□□ 0.77
CHRNA10-202ENST00000493827 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
CHRNA10-202ENST00000493827 DMRT2Q9Y5R5 561 aa19.84■□□□□ 0.77
CHRNA10-202ENST00000493827 ZCCHC6Q5VYS8 1495 aaKnown RBP19.7■□□□□ 0.74
CHRNA10-202ENST00000493827 MYO15BQ96JP2 1530 aa19.66■□□□□ 0.74
CHRNA10-202ENST00000493827 DCAF1Q9Y4B6 1507 aa19.56■□□□□ 0.72
CHRNA10-202ENST00000493827 UNC13AQ9UPW8 1703 aa19.52■□□□□ 0.72
CHRNA10-202ENST00000493827 CNKSR2Q8WXI2 1034 aa19.52■□□□□ 0.72
CHRNA10-202ENST00000493827 PABPN1Q86U42 306 aaKnown RBP eCLIP19.42■□□□□ 0.7
CHRNA10-202ENST00000493827 NCBP3Q53F19 620 aaKnown RBP19.37■□□□□ 0.69
CHRNA10-202ENST00000493827 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
CHRNA10-202ENST00000493827 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
CHRNA10-202ENST00000493827 HOXD11P31277 338 aaPredicted RBP19.27■□□□□ 0.68
CHRNA10-202ENST00000493827 RNF216Q9NWF9 866 aaPredicted RBP19.25■□□□□ 0.67
CHRNA10-202ENST00000493827 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
CHRNA10-202ENST00000493827 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
CHRNA10-202ENST00000493827 NPM3O75607 178 aaKnown RBP18.99■□□□□ 0.63
CHRNA10-202ENST00000493827 DCAF8L1A6NGE4 600 aa18.96■□□□□ 0.63
CHRNA10-202ENST00000493827 KCNA4P22459 653 aa18.94■□□□□ 0.62
CHRNA10-202ENST00000493827 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
CHRNA10-202ENST00000493827 CC2D2AQ9P2K1 1620 aa18.81■□□□□ 0.6
CHRNA10-202ENST00000493827 CECR2Q9BXF3 1484 aa18.69■□□□□ 0.58
CHRNA10-202ENST00000493827 RNF39Q9H2S5 420 aa18.43■□□□□ 0.54
CHRNA10-202ENST00000493827 SMARCA4P51532 1647 aa18.41■□□□□ 0.54
CHRNA10-202ENST00000493827 BAZ1AQ9NRL2 1556 aaPredicted RBP18.35■□□□□ 0.53
CHRNA10-202ENST00000493827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHRNA10-202ENST00000493827 ATAD2BQ9ULI0 1458 aa18.33■□□□□ 0.53
CHRNA10-202ENST00000493827 NCAPD3P42695 1498 aa18.32■□□□□ 0.52
CHRNA10-202ENST00000493827 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
CHRNA10-202ENST00000493827 MROH2BQ7Z745 1585 aa18.27■□□□□ 0.52
CHRNA10-202ENST00000493827 CACNB1Q02641 598 aaPredicted RBP18.25■□□□□ 0.51
CHRNA10-202ENST00000493827 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
CHRNA10-202ENST00000493827 C1QBPQ07021 282 aaKnown RBP18.22■□□□□ 0.51
CHRNA10-202ENST00000493827 PEG3Q9GZU2 1588 aa18.21■□□□□ 0.51
CHRNA10-202ENST00000493827 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
CHRNA10-202ENST00000493827 WIZO95785 1651 aa18.08■□□□□ 0.48
CHRNA10-202ENST00000493827 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
CHRNA10-202ENST00000493827 SLC4A1APQ9BWU0 796 aaKnown RBP18.01■□□□□ 0.47
CHRNA10-202ENST00000493827 RSF1Q96T23 1441 aaPredicted RBP17.99■□□□□ 0.47
CHRNA10-202ENST00000493827 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
CHRNA10-202ENST00000493827 NESP48681 1621 aa17.98■□□□□ 0.47
CHRNA10-202ENST00000493827 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
CHRNA10-202ENST00000493827 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
CHRNA10-202ENST00000493827 TOP2AP11388 1531 aaKnown RBP17.85■□□□□ 0.45
CHRNA10-202ENST00000493827 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
CHRNA10-202ENST00000493827 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.44
CHRNA10-202ENST00000493827 CUX2O14529 1486 aa17.75■□□□□ 0.43
CHRNA10-202ENST00000493827 PDS5BQ9NTI5 1447 aa17.74■□□□□ 0.43
CHRNA10-202ENST00000493827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
CHRNA10-202ENST00000493827 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
CHRNA10-202ENST00000493827 THOC2Q8NI27 1593 aaKnown RBP17.73■□□□□ 0.43
CHRNA10-202ENST00000493827 APLP2Q06481 763 aa17.67■□□□□ 0.42
CHRNA10-202ENST00000493827 CFTRP13569 1480 aa17.66■□□□□ 0.42
CHRNA10-202ENST00000493827 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.41
CHRNA10-202ENST00000493827 MYCNP04198 464 aaPredicted RBP17.63■□□□□ 0.41
CHRNA10-202ENST00000493827 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
CHRNA10-202ENST00000493827 SAMD1Q6SPF0 538 aaPredicted RBP17.61■□□□□ 0.41
CHRNA10-202ENST00000493827 FANCD2Q9BXW9 1451 aa17.6■□□□□ 0.41
CHRNA10-202ENST00000493827 MRC2Q9UBG0 1479 aa17.59■□□□□ 0.41
CHRNA10-202ENST00000493827 CEP164Q9UPV0 1460 aa17.59■□□□□ 0.41
CHRNA10-202ENST00000493827 CAPN15O75808 1086 aa17.57■□□□□ 0.4
CHRNA10-202ENST00000493827 SPINK5Q9NQ38 1064 aaPredicted RBP17.56■□□□□ 0.4
CHRNA10-202ENST00000493827 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
CHRNA10-202ENST00000493827 WDR62O43379 1518 aa17.54■□□□□ 0.4
CHRNA10-202ENST00000493827 SUPT5HO00267 1087 aaKnown RBP17.47■□□□□ 0.39
CHRNA10-202ENST00000493827 URB2Q14146 1524 aaKnown RBP17.45■□□□□ 0.38
CHRNA10-202ENST00000493827 ZNF219Q9P2Y4 722 aaPredicted RBP17.44■□□□□ 0.38
CHRNA10-202ENST00000493827 ZBTB22O15209 634 aa17.39■□□□□ 0.37
CHRNA10-202ENST00000493827 DSG3P32926 999 aa17.37■□□□□ 0.37
CHRNA10-202ENST00000493827 DNAJC5Q9H3Z4 198 aa17.36■□□□□ 0.37
CHRNA10-202ENST00000493827 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
CHRNA10-202ENST00000493827 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
CHRNA10-202ENST00000493827 DNMBPQ6XZF7 1577 aa17.28■□□□□ 0.36
CHRNA10-202ENST00000493827 ABCC8Q09428 1581 aa17.26■□□□□ 0.35
CHRNA10-202ENST00000493827 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
CHRNA10-202ENST00000493827 ZNF608Q9ULD9 1512 aaPredicted RBP17.18■□□□□ 0.34
CHRNA10-202ENST00000493827 POLA1P09884 1462 aaPredicted RBP17.16■□□□□ 0.34
CHRNA10-202ENST00000493827 ABCB7O75027 752 aa17.15■□□□□ 0.34
CHRNA10-202ENST00000493827 CUX1P39880 1505 aa17.15■□□□□ 0.34
CHRNA10-202ENST00000493827 TARBP1Q13395 1621 aaKnown RBP17.14■□□□□ 0.33
CHRNA10-202ENST00000493827 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
CHRNA10-202ENST00000493827 ATXN8OSP0DMR3 200 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms