RNA–Protein interactions for RNA: ENST00000493716.1

NDUFB5-213, Transcript of NADH:ubiquinone oxidoreductase subunit B5, humanhuman

TSL 2

Gene NDUFB5, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB5-213ENST00000493716 AEBP2Q6ZN18 517 aaPredicted RBP21.73■■□□□ 1.07
NDUFB5-213ENST00000493716 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
NDUFB5-213ENST00000493716 POTEDQ86YR6 584 aa19.41■□□□□ 0.7
NDUFB5-213ENST00000493716 SENP3Q9H4L4 574 aaPredicted RBP18.87■□□□□ 0.61
NDUFB5-213ENST00000493716 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
NDUFB5-213ENST00000493716 FOXD1Q16676 465 aa17.72■□□□□ 0.43
NDUFB5-213ENST00000493716 MSH5O43196 834 aa17.25■□□□□ 0.35
NDUFB5-213ENST00000493716 NISCHQ9Y2I1 1504 aa16.52■□□□□ 0.24
NDUFB5-213ENST00000493716 PIAS4Q8N2W9 510 aaPredicted RBP16.22■□□□□ 0.19
NDUFB5-213ENST00000493716 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
NDUFB5-213ENST00000493716 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
NDUFB5-213ENST00000493716 ADRA2BP18089 450 aa15.64■□□□□ 0.09
NDUFB5-213ENST00000493716 PLPPR3Q6T4P5 718 aa15.62■□□□□ 0.09
NDUFB5-213ENST00000493716 POTEHQ6S545 545 aa14.92□□□□□ -0.02
NDUFB5-213ENST00000493716 CCDC180Q9P1Z9 1646 aa14.77□□□□□ -0.04
NDUFB5-213ENST00000493716 DMRT2Q9Y5R5 561 aa14.71□□□□□ -0.05
NDUFB5-213ENST00000493716 ABCC9O60706 1549 aa14.61□□□□□ -0.07
NDUFB5-213ENST00000493716 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
NDUFB5-213ENST00000493716 RNF39Q9H2S5 420 aa14.53□□□□□ -0.08
NDUFB5-213ENST00000493716 SCAF1Q9H7N4 1312 aaKnown RBP14.43□□□□□ -0.1
NDUFB5-213ENST00000493716 C1QBPQ07021 282 aaKnown RBP14.26□□□□□ -0.13
NDUFB5-213ENST00000493716 DCAF8L1A6NGE4 600 aa14.2□□□□□ -0.14
NDUFB5-213ENST00000493716 RB1CC1Q8TDY2 1594 aa13.96□□□□□ -0.18
NDUFB5-213ENST00000493716 DCAF8L2P0C7V8 631 aa13.91□□□□□ -0.18
NDUFB5-213ENST00000493716 NACADO15069 1562 aa13.89□□□□□ -0.19
NDUFB5-213ENST00000493716 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
NDUFB5-213ENST00000493716 UNC13AQ9UPW8 1703 aa13.8□□□□□ -0.2
NDUFB5-213ENST00000493716 MYO15BQ96JP2 1530 aa13.73□□□□□ -0.21
NDUFB5-213ENST00000493716 ZCCHC6Q5VYS8 1495 aaKnown RBP13.71□□□□□ -0.21
NDUFB5-213ENST00000493716 PABPN1Q86U42 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
NDUFB5-213ENST00000493716 DNAJC5BQ9UF47 199 aa13.62□□□□□ -0.23
NDUFB5-213ENST00000493716 DCAF1Q9Y4B6 1507 aa13.62□□□□□ -0.23
NDUFB5-213ENST00000493716 BICRAQ9NZM4 1560 aa13.59□□□□□ -0.23
NDUFB5-213ENST00000493716 RNF216Q9NWF9 866 aaPredicted RBP13.59□□□□□ -0.23
NDUFB5-213ENST00000493716 PPP4R3CPQ6ZMV5 832 aa13.55□□□□□ -0.24
NDUFB5-213ENST00000493716 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
NDUFB5-213ENST00000493716 SCRIBQ14160 1630 aa13.48□□□□□ -0.25
NDUFB5-213ENST00000493716 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
NDUFB5-213ENST00000493716 SP7Q8TDD2 431 aaPredicted RBP13.27□□□□□ -0.29
NDUFB5-213ENST00000493716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.23□□□□□ -0.29
NDUFB5-213ENST00000493716 CC2D2AQ9P2K1 1620 aa13.23□□□□□ -0.29
NDUFB5-213ENST00000493716 EIF4G1Q04637 1599 aaKnown RBP13.21□□□□□ -0.29
NDUFB5-213ENST00000493716 CECR2Q9BXF3 1484 aa13.11□□□□□ -0.31
NDUFB5-213ENST00000493716 DSG3P32926 999 aa13.08□□□□□ -0.32
NDUFB5-213ENST00000493716 PLSCR2Q9NRY7 297 aa12.97□□□□□ -0.33
NDUFB5-213ENST00000493716 CAPN15O75808 1086 aa12.91□□□□□ -0.34
NDUFB5-213ENST00000493716 CHRDL2Q6WN34 429 aa12.89□□□□□ -0.35
NDUFB5-213ENST00000493716 SMARCA4P51532 1647 aa12.88□□□□□ -0.35
NDUFB5-213ENST00000493716 NCBP3Q53F19 620 aaKnown RBP12.87□□□□□ -0.35
NDUFB5-213ENST00000493716 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
NDUFB5-213ENST00000493716 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
NDUFB5-213ENST00000493716 NCAPD3P42695 1498 aa12.82□□□□□ -0.36
NDUFB5-213ENST00000493716 ATAD2BQ9ULI0 1458 aa12.81□□□□□ -0.36
NDUFB5-213ENST00000493716 BAZ1AQ9NRL2 1556 aaPredicted RBP12.8□□□□□ -0.36
NDUFB5-213ENST00000493716 SMARCA2P51531 1590 aa12.77□□□□□ -0.36
NDUFB5-213ENST00000493716 MROH2BQ7Z745 1585 aa12.76□□□□□ -0.37
NDUFB5-213ENST00000493716 HMGXB3Q12766 1538 aa12.73□□□□□ -0.37
NDUFB5-213ENST00000493716 PEG3Q9GZU2 1588 aa12.73□□□□□ -0.37
NDUFB5-213ENST00000493716 BAZ1BQ9UIG0 1483 aaKnown RBP12.69□□□□□ -0.38
NDUFB5-213ENST00000493716 WIZO95785 1651 aa12.66□□□□□ -0.38
NDUFB5-213ENST00000493716 NESP48681 1621 aa12.62□□□□□ -0.39
NDUFB5-213ENST00000493716 NPM3O75607 178 aaKnown RBP12.61□□□□□ -0.39
NDUFB5-213ENST00000493716 RBM42Q9BTD8 480 aaKnown RBP12.6□□□□□ -0.39
NDUFB5-213ENST00000493716 ERCC6Q03468 1493 aa12.55□□□□□ -0.4
NDUFB5-213ENST00000493716 RSF1Q96T23 1441 aaPredicted RBP12.53□□□□□ -0.4
NDUFB5-213ENST00000493716 APLP2Q06481 763 aa12.52□□□□□ -0.41
NDUFB5-213ENST00000493716 ZNF219Q9P2Y4 722 aaPredicted RBP12.52□□□□□ -0.41
NDUFB5-213ENST00000493716 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.41
NDUFB5-213ENST00000493716 KIF21AQ7Z4S6 1674 aa12.51□□□□□ -0.41
NDUFB5-213ENST00000493716 ABCB7O75027 752 aa12.51□□□□□ -0.41
NDUFB5-213ENST00000493716 TRHP20396 242 aaPredicted RBP12.5□□□□□ -0.41
NDUFB5-213ENST00000493716 HAX1O00165 279 aa12.47□□□□□ -0.41
NDUFB5-213ENST00000493716 CUX2O14529 1486 aa12.46□□□□□ -0.41
NDUFB5-213ENST00000493716 THOC2Q8NI27 1593 aaKnown RBP12.44□□□□□ -0.42
NDUFB5-213ENST00000493716 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
NDUFB5-213ENST00000493716 TOP2AP11388 1531 aaKnown RBP12.43□□□□□ -0.42
NDUFB5-213ENST00000493716 LHX8Q68G74 356 aa12.43□□□□□ -0.42
NDUFB5-213ENST00000493716 PDS5BQ9NTI5 1447 aa12.4□□□□□ -0.42
NDUFB5-213ENST00000493716 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
NDUFB5-213ENST00000493716 CFTRP13569 1480 aa12.34□□□□□ -0.43
NDUFB5-213ENST00000493716 CCDC88BA6NC98 1476 aa12.32□□□□□ -0.44
NDUFB5-213ENST00000493716 FANCD2Q9BXW9 1451 aa12.3□□□□□ -0.44
NDUFB5-213ENST00000493716 MRC2Q9UBG0 1479 aa12.3□□□□□ -0.44
NDUFB5-213ENST00000493716 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.3□□□□□ -0.44
NDUFB5-213ENST00000493716 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
NDUFB5-213ENST00000493716 DNAJC5Q9H3Z4 198 aa12.3□□□□□ -0.44
NDUFB5-213ENST00000493716 CEP164Q9UPV0 1460 aa12.28□□□□□ -0.44
NDUFB5-213ENST00000493716 WDR62O43379 1518 aa12.28□□□□□ -0.44
NDUFB5-213ENST00000493716 PIP4P2Q8N4L2 257 aa12.24□□□□□ -0.45
NDUFB5-213ENST00000493716 SLC4A2P04920 1241 aa12.21□□□□□ -0.45
NDUFB5-213ENST00000493716 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.46
NDUFB5-213ENST00000493716 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
NDUFB5-213ENST00000493716 SUPT5HO00267 1087 aaKnown RBP12.13□□□□□ -0.47
NDUFB5-213ENST00000493716 EVX2Q03828 476 aa12.11□□□□□ -0.47
NDUFB5-213ENST00000493716 TOPBP1Q92547 1522 aa12.1□□□□□ -0.47
NDUFB5-213ENST00000493716 DNMBPQ6XZF7 1577 aa12.07□□□□□ -0.48
NDUFB5-213ENST00000493716 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
NDUFB5-213ENST00000493716 ZNF608Q9ULD9 1512 aaPredicted RBP12.04□□□□□ -0.48
NDUFB5-213ENST00000493716 IFT140Q96RY7 1462 aa12.02□□□□□ -0.48
NDUFB5-213ENST00000493716 AKT1S1Q96B36 256 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms