RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 NISCHQ9Y2I1 1504 aa15.79■□□□□ 0.12
GBP3-208ENST00000493594 SHROOM4Q9ULL8 1493 aa14.15□□□□□ -0.14
GBP3-208ENST00000493594 HRCP23327 699 aa14.11□□□□□ -0.15
GBP3-208ENST00000493594 SUPT5HO00267 1087 aaKnown RBP14.11□□□□□ -0.15
GBP3-208ENST00000493594 PCGF6Q9BYE7 350 aa13.94□□□□□ -0.18
GBP3-208ENST00000493594 PPARGC1BQ86YN6 1023 aaKnown RBP13.93□□□□□ -0.18
GBP3-208ENST00000493594 MYO15BQ96JP2 1530 aa13.82□□□□□ -0.2
GBP3-208ENST00000493594 CHIC1Q5VXU3 224 aa13.78□□□□□ -0.2
GBP3-208ENST00000493594 LOC105371045A0A1W2PR82 267 aa13.54□□□□□ -0.24
GBP3-208ENST00000493594 PELP1Q8IZL8 1130 aaKnown RBP13.46□□□□□ -0.26
GBP3-208ENST00000493594 DCAF1Q9Y4B6 1507 aa13.43□□□□□ -0.26
GBP3-208ENST00000493594 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
GBP3-208ENST00000493594 TRIM26Q12899 539 aaPredicted RBP13.42□□□□□ -0.26
GBP3-208ENST00000493594 ZCCHC6Q5VYS8 1495 aaKnown RBP13.41□□□□□ -0.26
GBP3-208ENST00000493594 SCAF1Q9H7N4 1312 aaKnown RBP13.36□□□□□ -0.27
GBP3-208ENST00000493594 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
GBP3-208ENST00000493594 CCDC180Q9P1Z9 1646 aa13.24□□□□□ -0.29
GBP3-208ENST00000493594 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
GBP3-208ENST00000493594 FAM9AQ8IZU1 332 aaPredicted RBP13.08□□□□□ -0.32
GBP3-208ENST00000493594 NEUROD1Q13562 356 aa13.03□□□□□ -0.32
GBP3-208ENST00000493594 ACIN1Q9UKV3 1341 aaKnown RBP13.03□□□□□ -0.32
GBP3-208ENST00000493594 TRIM41Q8WV44 630 aa13□□□□□ -0.33
GBP3-208ENST00000493594 GTF3C3Q9Y5Q9 886 aa12.97□□□□□ -0.33
GBP3-208ENST00000493594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.94□□□□□ -0.34
GBP3-208ENST00000493594 CCER1Q8TC90 406 aaPredicted RBP12.89□□□□□ -0.35
GBP3-208ENST00000493594 MYT1Q01538 1121 aa12.88□□□□□ -0.35
GBP3-208ENST00000493594 DIEXFQ68CQ4 756 aaKnown RBP12.86□□□□□ -0.35
GBP3-208ENST00000493594 CENPBP07199 599 aaPredicted RBP12.86□□□□□ -0.35
GBP3-208ENST00000493594 RSF1Q96T23 1441 aaPredicted RBP12.75□□□□□ -0.37
GBP3-208ENST00000493594 TTBK1Q5TCY1 1321 aaPredicted RBP12.75□□□□□ -0.37
GBP3-208ENST00000493594 YTHDC1Q96MU7 727 aaKnown RBP12.73□□□□□ -0.37
GBP3-208ENST00000493594 ABCC9O60706 1549 aa12.71□□□□□ -0.37
GBP3-208ENST00000493594 RB1CC1Q8TDY2 1594 aa12.68□□□□□ -0.38
GBP3-208ENST00000493594 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
GBP3-208ENST00000493594 SCRIBQ14160 1630 aa12.57□□□□□ -0.4
GBP3-208ENST00000493594 MIER1Q8N108 512 aa12.56□□□□□ -0.4
GBP3-208ENST00000493594 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
GBP3-208ENST00000493594 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.42
GBP3-208ENST00000493594 CEP162Q5TB80 1403 aa12.39□□□□□ -0.43
GBP3-208ENST00000493594 MROH2BQ7Z745 1585 aa12.38□□□□□ -0.43
GBP3-208ENST00000493594 WRNQ14191 1432 aaPredicted RBP eCLIP12.38□□□□□ -0.43
GBP3-208ENST00000493594 UBTFP17480 764 aaKnown RBP12.37□□□□□ -0.43
GBP3-208ENST00000493594 WIZO95785 1651 aa12.34□□□□□ -0.43
GBP3-208ENST00000493594 SUPT16HQ9Y5B9 1047 aaKnown RBP12.32□□□□□ -0.44
GBP3-208ENST00000493594 CCDC88BA6NC98 1476 aa12.31□□□□□ -0.44
GBP3-208ENST00000493594 SOGA1O94964 1423 aa12.29□□□□□ -0.44
GBP3-208ENST00000493594 ABCC8Q09428 1581 aa12.29□□□□□ -0.44
GBP3-208ENST00000493594 TNIKQ9UKE5 1360 aa12.28□□□□□ -0.44
GBP3-208ENST00000493594 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
GBP3-208ENST00000493594 TSHZ2Q9NRE2 1034 aa12.25□□□□□ -0.45
GBP3-208ENST00000493594 ANP32EQ9BTT0 268 aa12.24□□□□□ -0.45
GBP3-208ENST00000493594 RUSC2Q8N2Y8 1516 aa12.22□□□□□ -0.45
GBP3-208ENST00000493594 EIF4G1Q04637 1599 aaKnown RBP12.21□□□□□ -0.46
GBP3-208ENST00000493594 BCL11AQ9H165 835 aa12.19□□□□□ -0.46
GBP3-208ENST00000493594 RANGAP1P46060 587 aaPredicted RBP12.18□□□□□ -0.46
GBP3-208ENST00000493594 BAZ1AQ9NRL2 1556 aaPredicted RBP12.17□□□□□ -0.46
GBP3-208ENST00000493594 CLSPNQ9HAW4 1339 aa12.16□□□□□ -0.46
GBP3-208ENST00000493594 BCANQ96GW7 911 aa12.15□□□□□ -0.46
GBP3-208ENST00000493594 APLP2Q06481 763 aa12.15□□□□□ -0.47
GBP3-208ENST00000493594 GOLGA3Q08378 1498 aa12.12□□□□□ -0.47
GBP3-208ENST00000493594 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
GBP3-208ENST00000493594 EEA1Q15075 1411 aa12.09□□□□□ -0.47
GBP3-208ENST00000493594 CLIP1P30622 1438 aa12.07□□□□□ -0.48
GBP3-208ENST00000493594 NACADO15069 1562 aa12.05□□□□□ -0.48
GBP3-208ENST00000493594 FKBP8Q14318 412 aa12.05□□□□□ -0.48
GBP3-208ENST00000493594 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
GBP3-208ENST00000493594 TOP2AP11388 1531 aaKnown RBP12.03□□□□□ -0.48
GBP3-208ENST00000493594 SMARCA2P51531 1590 aa12.03□□□□□ -0.48
GBP3-208ENST00000493594 VPS8Q8N3P4 1428 aa12.02□□□□□ -0.49
GBP3-208ENST00000493594 CEP164Q9UPV0 1460 aa11.99□□□□□ -0.49
GBP3-208ENST00000493594 RBM19Q9Y4C8 960 aaKnown RBP11.99□□□□□ -0.49
GBP3-208ENST00000493594 ITGAEP38570 1179 aa11.96□□□□□ -0.49
GBP3-208ENST00000493594 KANK4Q5T7N3 995 aaPredicted RBP11.94□□□□□ -0.5
GBP3-208ENST00000493594 DDX10Q13206 875 aaKnown RBP11.93□□□□□ -0.5
GBP3-208ENST00000493594 RAPGEF2Q9Y4G8 1499 aa11.93□□□□□ -0.5
GBP3-208ENST00000493594 SMARCA4P51532 1647 aa11.92□□□□□ -0.5
GBP3-208ENST00000493594 NEFLP07196 543 aa11.91□□□□□ -0.5
GBP3-208ENST00000493594 KIF21BO75037 1637 aa11.9□□□□□ -0.5
GBP3-208ENST00000493594 TRIM52Q96A61 297 aa11.9□□□□□ -0.5
GBP3-208ENST00000493594 MSH5O43196 834 aa11.87□□□□□ -0.51
GBP3-208ENST00000493594 HIRIP3Q9BW71 556 aaPredicted RBP11.87□□□□□ -0.51
GBP3-208ENST00000493594 SYNJ1O43426 1573 aa11.86□□□□□ -0.51
GBP3-208ENST00000493594 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
GBP3-208ENST00000493594 SIN3AQ96ST3 1273 aa11.81□□□□□ -0.52
GBP3-208ENST00000493594 CCNB3Q8WWL7 1395 aa11.78□□□□□ -0.52
GBP3-208ENST00000493594 IRX6P78412 446 aaPredicted RBP11.78□□□□□ -0.52
GBP3-208ENST00000493594 ERICH6Q7L0X2 663 aa11.78□□□□□ -0.52
GBP3-208ENST00000493594 RAB3GAP2Q9H2M9 1393 aa11.78□□□□□ -0.52
GBP3-208ENST00000493594 RRBP1Q9P2E9 1410 aaKnown RBP11.78□□□□□ -0.52
GBP3-208ENST00000493594 PPP1R15AO75807 674 aaPredicted RBP11.77□□□□□ -0.52
GBP3-208ENST00000493594 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
GBP3-208ENST00000493594 ARAP1Q96P48 1450 aa11.77□□□□□ -0.53
GBP3-208ENST00000493594 ANP32CO43423 234 aa11.76□□□□□ -0.53
GBP3-208ENST00000493594 WDR97A6NE52 1622 aa11.74□□□□□ -0.53
GBP3-208ENST00000493594 AEBP2Q6ZN18 517 aaPredicted RBP11.74□□□□□ -0.53
GBP3-208ENST00000493594 MAPKBP1O60336 1514 aa11.73□□□□□ -0.53
GBP3-208ENST00000493594 CDK11AQ9UQ88 783 aaPredicted RBP11.73□□□□□ -0.53
GBP3-208ENST00000493594 CUX2O14529 1486 aa11.72□□□□□ -0.53
GBP3-208ENST00000493594 CCER2I3L3R5 266 aa11.72□□□□□ -0.53
GBP3-208ENST00000493594 FANCIQ9NVI1 1328 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms