RNA–Protein interactions for RNA: ENST00000490388.2

VAV3-206, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene VAV3, Length 2,271 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-206ENST00000490388 NISCHQ9Y2I1 1504 aa21.06■□□□□ 0.96
VAV3-206ENST00000490388 SHROOM4Q9ULL8 1493 aa18■□□□□ 0.47
VAV3-206ENST00000490388 CCDC180Q9P1Z9 1646 aa17.88■□□□□ 0.45
VAV3-206ENST00000490388 ZCCHC6Q5VYS8 1495 aaKnown RBP17.83■□□□□ 0.45
VAV3-206ENST00000490388 SUPT5HO00267 1087 aaKnown RBP17.7■□□□□ 0.42
VAV3-206ENST00000490388 DCAF8L2P0C7V8 631 aa17.44■□□□□ 0.38
VAV3-206ENST00000490388 DCAF1Q9Y4B6 1507 aa17.29■□□□□ 0.36
VAV3-206ENST00000490388 CHIC1Q5VXU3 224 aa17.25■□□□□ 0.35
VAV3-206ENST00000490388 MYO15BQ96JP2 1530 aa17.19■□□□□ 0.34
VAV3-206ENST00000490388 ABCC9O60706 1549 aa16.92■□□□□ 0.3
VAV3-206ENST00000490388 HRCP23327 699 aa16.88■□□□□ 0.29
VAV3-206ENST00000490388 PCGF6Q9BYE7 350 aa16.81■□□□□ 0.28
VAV3-206ENST00000490388 SCRIBQ14160 1630 aa16.76■□□□□ 0.27
VAV3-206ENST00000490388 LOC105371045A0A1W2PR82 267 aa16.73■□□□□ 0.27
VAV3-206ENST00000490388 RSF1Q96T23 1441 aaPredicted RBP16.69■□□□□ 0.26
VAV3-206ENST00000490388 NACADO15069 1562 aa16.57■□□□□ 0.24
VAV3-206ENST00000490388 RB1CC1Q8TDY2 1594 aa16.54■□□□□ 0.24
VAV3-206ENST00000490388 TRIM41Q8WV44 630 aa16.5■□□□□ 0.23
VAV3-206ENST00000490388 TRIM26Q12899 539 aaPredicted RBP16.49■□□□□ 0.23
VAV3-206ENST00000490388 PPARGC1BQ86YN6 1023 aaKnown RBP16.48■□□□□ 0.23
VAV3-206ENST00000490388 CECR2Q9BXF3 1484 aa16.4■□□□□ 0.22
VAV3-206ENST00000490388 MROH2BQ7Z745 1585 aa16.36■□□□□ 0.21
VAV3-206ENST00000490388 FAM9AQ8IZU1 332 aaPredicted RBP16.35■□□□□ 0.21
VAV3-206ENST00000490388 WIZO95785 1651 aa16.28■□□□□ 0.2
VAV3-206ENST00000490388 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.19
VAV3-206ENST00000490388 ZEB1P37275 1124 aaPredicted RBP16.2■□□□□ 0.18
VAV3-206ENST00000490388 EHMT2Q96KQ7 1210 aa16.2■□□□□ 0.18
VAV3-206ENST00000490388 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
VAV3-206ENST00000490388 EIF4G1Q04637 1599 aaKnown RBP16.1■□□□□ 0.17
VAV3-206ENST00000490388 TOP2AP11388 1531 aaKnown RBP16.05■□□□□ 0.16
VAV3-206ENST00000490388 SMARCA4P51532 1647 aa16.03■□□□□ 0.16
VAV3-206ENST00000490388 BICRAQ9NZM4 1560 aa15.97■□□□□ 0.15
VAV3-206ENST00000490388 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
VAV3-206ENST00000490388 SMARCA2P51531 1590 aa15.96■□□□□ 0.14
VAV3-206ENST00000490388 ABCC8Q09428 1581 aa15.95■□□□□ 0.14
VAV3-206ENST00000490388 PABPN1Q86U42 306 aaKnown RBP eCLIP15.91■□□□□ 0.14
VAV3-206ENST00000490388 SOGA1O94964 1423 aa15.82■□□□□ 0.12
VAV3-206ENST00000490388 WRNQ14191 1432 aaPredicted RBP eCLIP15.82■□□□□ 0.12
VAV3-206ENST00000490388 CEP162Q5TB80 1403 aa15.81■□□□□ 0.12
VAV3-206ENST00000490388 EEA1Q15075 1411 aa15.8■□□□□ 0.12
VAV3-206ENST00000490388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
VAV3-206ENST00000490388 CCER1Q8TC90 406 aaPredicted RBP15.79■□□□□ 0.12
VAV3-206ENST00000490388 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
VAV3-206ENST00000490388 CSRNP3Q8WYN3 585 aa15.75■□□□□ 0.11
VAV3-206ENST00000490388 RUSC2Q8N2Y8 1516 aa15.72■□□□□ 0.11
VAV3-206ENST00000490388 PEG3Q9GZU2 1588 aa15.71■□□□□ 0.11
VAV3-206ENST00000490388 TTBK1Q5TCY1 1321 aaPredicted RBP15.71■□□□□ 0.11
VAV3-206ENST00000490388 UBTFP17480 764 aaKnown RBP15.71■□□□□ 0.11
VAV3-206ENST00000490388 GOLGA3Q08378 1498 aa15.69■□□□□ 0.1
VAV3-206ENST00000490388 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
VAV3-206ENST00000490388 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
VAV3-206ENST00000490388 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
VAV3-206ENST00000490388 SCAF1Q9H7N4 1312 aaKnown RBP15.58■□□□□ 0.08
VAV3-206ENST00000490388 BAZ1BQ9UIG0 1483 aaKnown RBP15.57■□□□□ 0.08
VAV3-206ENST00000490388 KIF21BO75037 1637 aa15.56■□□□□ 0.08
VAV3-206ENST00000490388 DIEXFQ68CQ4 756 aaKnown RBP15.51■□□□□ 0.07
VAV3-206ENST00000490388 CLIP1P30622 1438 aa15.5■□□□□ 0.07
VAV3-206ENST00000490388 VPS8Q8N3P4 1428 aa15.45■□□□□ 0.06
VAV3-206ENST00000490388 RAPGEF2Q9Y4G8 1499 aa15.44■□□□□ 0.06
VAV3-206ENST00000490388 ACIN1Q9UKV3 1341 aaKnown RBP15.43■□□□□ 0.06
VAV3-206ENST00000490388 TOP2BQ02880 1626 aa15.41■□□□□ 0.06
VAV3-206ENST00000490388 APLP2Q06481 763 aa15.41■□□□□ 0.06
VAV3-206ENST00000490388 PELP1Q8IZL8 1130 aaKnown RBP15.41■□□□□ 0.06
VAV3-206ENST00000490388 HNRNPUL2Q1KMD3 747 aaKnown RBP15.4■□□□□ 0.06
VAV3-206ENST00000490388 NEUROD1Q13562 356 aa15.39■□□□□ 0.05
VAV3-206ENST00000490388 ZNF316A6NFI3 1004 aaPredicted RBP15.38■□□□□ 0.05
VAV3-206ENST00000490388 CENPBP07199 599 aaPredicted RBP15.38■□□□□ 0.05
VAV3-206ENST00000490388 RANGAP1P46060 587 aaPredicted RBP15.36■□□□□ 0.05
VAV3-206ENST00000490388 BIVM-ERCC5R4GMW8 1640 aa15.36■□□□□ 0.05
VAV3-206ENST00000490388 CC2D2AQ9P2K1 1620 aa15.31■□□□□ 0.04
VAV3-206ENST00000490388 ERICH3Q5RHP9 1530 aa15.3■□□□□ 0.04
VAV3-206ENST00000490388 HMGXB3Q12766 1538 aa15.28■□□□□ 0.04
VAV3-206ENST00000490388 NCAPD3P42695 1498 aa15.28■□□□□ 0.04
VAV3-206ENST00000490388 PRXQ9BXM0 1461 aa15.28■□□□□ 0.04
VAV3-206ENST00000490388 GTF3C3Q9Y5Q9 886 aa15.26■□□□□ 0.03
VAV3-206ENST00000490388 CUX1P39880 1505 aa15.24■□□□□ 0.03
VAV3-206ENST00000490388 ARAP1Q96P48 1450 aa15.23■□□□□ 0.03
VAV3-206ENST00000490388 KIF27Q86VH2 1401 aa15.21■□□□□ 0.03
VAV3-206ENST00000490388 CFTRP13569 1480 aa15.18■□□□□ 0.02
VAV3-206ENST00000490388 MIER1Q8N108 512 aa15.15■□□□□ 0.02
VAV3-206ENST00000490388 CLSPNQ9HAW4 1339 aa15.14■□□□□ 0.01
VAV3-206ENST00000490388 KANK4Q5T7N3 995 aaPredicted RBP15.14■□□□□ 0.01
VAV3-206ENST00000490388 YTHDC1Q96MU7 727 aaKnown RBP15.14■□□□□ 0.01
VAV3-206ENST00000490388 DHX57Q6P158 1386 aaKnown RBP15.11■□□□□ 0.01
VAV3-206ENST00000490388 RRBP1Q9P2E9 1410 aaKnown RBP15.09■□□□□ 0.01
VAV3-206ENST00000490388 ARHGAP35Q9NRY4 1499 aa15.09■□□□□ 0.01
VAV3-206ENST00000490388 PRDM2Q13029 1718 aa15.07■□□□□ 0
VAV3-206ENST00000490388 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
VAV3-206ENST00000490388 CUX2O14529 1486 aa15.04■□□□□ -0
VAV3-206ENST00000490388 CCNB3Q8WWL7 1395 aa15.03■□□□□ -0
VAV3-206ENST00000490388 IGF1RP08069 1367 aa15.01□□□□□ -0.01
VAV3-206ENST00000490388 CADPSQ9ULU8 1353 aa14.99□□□□□ -0.01
VAV3-206ENST00000490388 CARMIL1Q5VZK9 1371 aa14.97□□□□□ -0.01
VAV3-206ENST00000490388 ITGAEP38570 1179 aa14.96□□□□□ -0.01
VAV3-206ENST00000490388 FGD5Q6ZNL6 1462 aa14.96□□□□□ -0.01
VAV3-206ENST00000490388 TIAM1Q13009 1591 aa14.95□□□□□ -0.02
VAV3-206ENST00000490388 MAP3K1Q13233 1512 aa14.95□□□□□ -0.02
VAV3-206ENST00000490388 RAB3GAP2Q9H2M9 1393 aa14.9□□□□□ -0.02
VAV3-206ENST00000490388 LRRC9Q6ZRR7 1453 aa14.89□□□□□ -0.03
VAV3-206ENST00000490388 FHAD1B1AJZ9 1412 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms