RNA–Protein interactions for RNA: ENST00000490247.1

THBS1-205, Transcript of thrombospondin 1, humanhuman

TSL 2

Gene THBS1, Length 431 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1-205ENST00000490247 AEBP2Q6ZN18 517 aaPredicted RBP22.46■■□□□ 1.19
THBS1-205ENST00000490247 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
THBS1-205ENST00000490247 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
THBS1-205ENST00000490247 SENP3Q9H4L4 574 aaPredicted RBP18.91■□□□□ 0.62
THBS1-205ENST00000490247 NISCHQ9Y2I1 1504 aa18.61■□□□□ 0.57
THBS1-205ENST00000490247 PLPPR3Q6T4P5 718 aa18.26■□□□□ 0.51
THBS1-205ENST00000490247 FOXD1Q16676 465 aa17.55■□□□□ 0.4
THBS1-205ENST00000490247 ADRA2BP18089 450 aa17.24■□□□□ 0.35
THBS1-205ENST00000490247 PPP6R1Q9UPN7 881 aa17.24■□□□□ 0.35
THBS1-205ENST00000490247 PIAS4Q8N2W9 510 aaPredicted RBP16.64■□□□□ 0.25
THBS1-205ENST00000490247 CCDC180Q9P1Z9 1646 aa16.54■□□□□ 0.24
THBS1-205ENST00000490247 KCNA4P22459 653 aa16.29■□□□□ 0.2
THBS1-205ENST00000490247 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
THBS1-205ENST00000490247 ABCC9O60706 1549 aa16.07■□□□□ 0.16
THBS1-205ENST00000490247 MSH5O43196 834 aa15.96■□□□□ 0.15
THBS1-205ENST00000490247 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
THBS1-205ENST00000490247 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
THBS1-205ENST00000490247 NPM3O75607 178 aaKnown RBP15.64■□□□□ 0.09
THBS1-205ENST00000490247 EHMT2Q96KQ7 1210 aa15.63■□□□□ 0.09
THBS1-205ENST00000490247 CNKSR2Q8WXI2 1034 aa15.6■□□□□ 0.09
THBS1-205ENST00000490247 SLC4A1APQ9BWU0 796 aaKnown RBP15.56■□□□□ 0.08
THBS1-205ENST00000490247 ZCCHC6Q5VYS8 1495 aaKnown RBP15.53■□□□□ 0.08
THBS1-205ENST00000490247 MAPK8IP2Q13387 824 aaPredicted RBP15.53■□□□□ 0.08
THBS1-205ENST00000490247 DCAF8L2P0C7V8 631 aa15.52■□□□□ 0.08
THBS1-205ENST00000490247 RB1CC1Q8TDY2 1594 aa15.5■□□□□ 0.07
THBS1-205ENST00000490247 NACADO15069 1562 aa15.49■□□□□ 0.07
THBS1-205ENST00000490247 MYO15BQ96JP2 1530 aa15.4■□□□□ 0.06
THBS1-205ENST00000490247 DCAF1Q9Y4B6 1507 aa15.39■□□□□ 0.05
THBS1-205ENST00000490247 CSRNP3Q8WYN3 585 aa15.25■□□□□ 0.03
THBS1-205ENST00000490247 UNC13AQ9UPW8 1703 aa15.23■□□□□ 0.03
THBS1-205ENST00000490247 RNF216Q9NWF9 866 aaPredicted RBP15.19■□□□□ 0.02
THBS1-205ENST00000490247 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
THBS1-205ENST00000490247 SCRIBQ14160 1630 aa15.12■□□□□ 0.01
THBS1-205ENST00000490247 DNAJC5BQ9UF47 199 aa15.07■□□□□ 0
THBS1-205ENST00000490247 HOXD11P31277 338 aaPredicted RBP15.03■□□□□ -0
THBS1-205ENST00000490247 BICRAQ9NZM4 1560 aa15.02■□□□□ -0
THBS1-205ENST00000490247 ZBTB22O15209 634 aa15.02■□□□□ -0
THBS1-205ENST00000490247 PABPN1Q86U42 306 aaKnown RBP eCLIP15.02■□□□□ -0
THBS1-205ENST00000490247 SHROOM4Q9ULL8 1493 aa14.84□□□□□ -0.03
THBS1-205ENST00000490247 FOXD4L1Q9NU39 408 aa14.84□□□□□ -0.03
THBS1-205ENST00000490247 SLC4A2P04920 1241 aa14.69□□□□□ -0.06
THBS1-205ENST00000490247 EIF4G1Q04637 1599 aaKnown RBP14.63□□□□□ -0.07
THBS1-205ENST00000490247 CC2D2AQ9P2K1 1620 aa14.55□□□□□ -0.08
THBS1-205ENST00000490247 DCAF8L1A6NGE4 600 aa14.51□□□□□ -0.09
THBS1-205ENST00000490247 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
THBS1-205ENST00000490247 SMARCA4P51532 1647 aa14.45□□□□□ -0.1
THBS1-205ENST00000490247 BAZ1AQ9NRL2 1556 aaPredicted RBP14.43□□□□□ -0.1
THBS1-205ENST00000490247 MYCNP04198 464 aaPredicted RBP14.41□□□□□ -0.1
THBS1-205ENST00000490247 MROH2BQ7Z745 1585 aa14.36□□□□□ -0.11
THBS1-205ENST00000490247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.32□□□□□ -0.12
THBS1-205ENST00000490247 ATAD2BQ9ULI0 1458 aa14.31□□□□□ -0.12
THBS1-205ENST00000490247 SMARCA2P51531 1590 aa14.31□□□□□ -0.12
THBS1-205ENST00000490247 PEG3Q9GZU2 1588 aa14.28□□□□□ -0.12
THBS1-205ENST00000490247 NCAPD3P42695 1498 aa14.26□□□□□ -0.13
THBS1-205ENST00000490247 ATXN8OSP0DMR3 200 aa14.25□□□□□ -0.13
THBS1-205ENST00000490247 WIZO95785 1651 aa14.25□□□□□ -0.13
THBS1-205ENST00000490247 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
THBS1-205ENST00000490247 BAZ1BQ9UIG0 1483 aaKnown RBP14.22□□□□□ -0.13
THBS1-205ENST00000490247 RSF1Q96T23 1441 aaPredicted RBP14.22□□□□□ -0.13
THBS1-205ENST00000490247 U3KPZ7 1027 aaPredicted RBP14.17□□□□□ -0.14
THBS1-205ENST00000490247 TOP2AP11388 1531 aaKnown RBP14.07□□□□□ -0.16
THBS1-205ENST00000490247 ATF5Q9Y2D1 282 aaPredicted RBP14.06□□□□□ -0.16
THBS1-205ENST00000490247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.04□□□□□ -0.16
THBS1-205ENST00000490247 HNRNPUL2Q1KMD3 747 aaKnown RBP14.04□□□□□ -0.16
THBS1-205ENST00000490247 SAMD1Q6SPF0 538 aaPredicted RBP14.04□□□□□ -0.16
THBS1-205ENST00000490247 SUPT5HO00267 1087 aaKnown RBP13.96□□□□□ -0.17
THBS1-205ENST00000490247 NESP48681 1621 aa13.94□□□□□ -0.18
THBS1-205ENST00000490247 LAMC3Q9Y6N6 1575 aa13.91□□□□□ -0.18
THBS1-205ENST00000490247 CCDC88BA6NC98 1476 aa13.89□□□□□ -0.19
THBS1-205ENST00000490247 CADPSQ9ULU8 1353 aa13.86□□□□□ -0.19
THBS1-205ENST00000490247 POTEDQ86YR6 584 aa13.86□□□□□ -0.19
THBS1-205ENST00000490247 ERCC6Q03468 1493 aa13.84□□□□□ -0.19
THBS1-205ENST00000490247 KIF21AQ7Z4S6 1674 aa13.83□□□□□ -0.2
THBS1-205ENST00000490247 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
THBS1-205ENST00000490247 CFTRP13569 1480 aa13.8□□□□□ -0.2
THBS1-205ENST00000490247 APLP2Q06481 763 aa13.79□□□□□ -0.2
THBS1-205ENST00000490247 PDS5BQ9NTI5 1447 aa13.79□□□□□ -0.2
THBS1-205ENST00000490247 FKBP8Q14318 412 aa13.75□□□□□ -0.21
THBS1-205ENST00000490247 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
THBS1-205ENST00000490247 ZNF219Q9P2Y4 722 aaPredicted RBP13.74□□□□□ -0.21
THBS1-205ENST00000490247 FANCD2Q9BXW9 1451 aa13.73□□□□□ -0.21
THBS1-205ENST00000490247 THOC2Q8NI27 1593 aaKnown RBP13.72□□□□□ -0.21
THBS1-205ENST00000490247 CEP164Q9UPV0 1460 aa13.71□□□□□ -0.21
THBS1-205ENST00000490247 MRC2Q9UBG0 1479 aa13.67□□□□□ -0.22
THBS1-205ENST00000490247 SPINK5Q9NQ38 1064 aaPredicted RBP13.66□□□□□ -0.22
THBS1-205ENST00000490247 CUX2O14529 1486 aa13.63□□□□□ -0.23
THBS1-205ENST00000490247 WDR62O43379 1518 aa13.62□□□□□ -0.23
THBS1-205ENST00000490247 TRHP20396 242 aaPredicted RBP13.6□□□□□ -0.23
THBS1-205ENST00000490247 URB2Q14146 1524 aaKnown RBP13.59□□□□□ -0.23
THBS1-205ENST00000490247 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.24
THBS1-205ENST00000490247 CAPN15O75808 1086 aa13.55□□□□□ -0.24
THBS1-205ENST00000490247 TOPBP1Q92547 1522 aa13.53□□□□□ -0.24
THBS1-205ENST00000490247 DNMBPQ6XZF7 1577 aa13.53□□□□□ -0.24
THBS1-205ENST00000490247 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
THBS1-205ENST00000490247 CUX1P39880 1505 aa13.48□□□□□ -0.25
THBS1-205ENST00000490247 POLA2Q14181 598 aa13.47□□□□□ -0.25
THBS1-205ENST00000490247 MKRN4PQ13434 485 aaPredicted RBP13.46□□□□□ -0.25
THBS1-205ENST00000490247 POLA1P09884 1462 aaPredicted RBP13.42□□□□□ -0.26
THBS1-205ENST00000490247 FGD5Q6ZNL6 1462 aa13.41□□□□□ -0.26
THBS1-205ENST00000490247 SYNJ1O43426 1573 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms