RNA–Protein interactions for RNA: ENST00000487344.1

RGS3-221, Transcript of regulator of G protein signaling 3, humanhuman

TSL 1 (best)

Gene RGS3, Length 4,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGS3-221ENST00000487344 NISCHQ9Y2I1 1504 aa22.41■■□□□ 1.18
RGS3-221ENST00000487344 DCAF8L2P0C7V8 631 aa21.17■□□□□ 0.98
RGS3-221ENST00000487344 SUPT5HO00267 1087 aaKnown RBP20.26■□□□□ 0.83
RGS3-221ENST00000487344 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
RGS3-221ENST00000487344 ABCC9O60706 1549 aa19.9■□□□□ 0.78
RGS3-221ENST00000487344 PCGF6Q9BYE7 350 aa19.26■□□□□ 0.67
RGS3-221ENST00000487344 PABPN1Q86U42 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
RGS3-221ENST00000487344 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
RGS3-221ENST00000487344 CCDC180Q9P1Z9 1646 aa18.97■□□□□ 0.63
RGS3-221ENST00000487344 FAM9AQ8IZU1 332 aaPredicted RBP18.94■□□□□ 0.62
RGS3-221ENST00000487344 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
RGS3-221ENST00000487344 HRCP23327 699 aa18.79■□□□□ 0.6
RGS3-221ENST00000487344 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
RGS3-221ENST00000487344 ZEB1P37275 1124 aaPredicted RBP18.67■□□□□ 0.58
RGS3-221ENST00000487344 LOC105371045A0A1W2PR82 267 aa18.58■□□□□ 0.57
RGS3-221ENST00000487344 TRIM26Q12899 539 aaPredicted RBP18.55■□□□□ 0.56
RGS3-221ENST00000487344 TTBK1Q5TCY1 1321 aaPredicted RBP18.55■□□□□ 0.56
RGS3-221ENST00000487344 ZCCHC6Q5VYS8 1495 aaKnown RBP18.54■□□□□ 0.56
RGS3-221ENST00000487344 SCRIBQ14160 1630 aa18.5■□□□□ 0.55
RGS3-221ENST00000487344 CCER1Q8TC90 406 aaPredicted RBP18.45■□□□□ 0.54
RGS3-221ENST00000487344 APLP2Q06481 763 aa18.43■□□□□ 0.54
RGS3-221ENST00000487344 PPARGC1BQ86YN6 1023 aaKnown RBP18.43■□□□□ 0.54
RGS3-221ENST00000487344 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
RGS3-221ENST00000487344 CENPBP07199 599 aaPredicted RBP18.31■□□□□ 0.52
RGS3-221ENST00000487344 NACADO15069 1562 aa18.26■□□□□ 0.51
RGS3-221ENST00000487344 PELP1Q8IZL8 1130 aaKnown RBP18.24■□□□□ 0.51
RGS3-221ENST00000487344 UBTFP17480 764 aaKnown RBP18.22■□□□□ 0.51
RGS3-221ENST00000487344 RANGAP1P46060 587 aaPredicted RBP18.15■□□□□ 0.5
RGS3-221ENST00000487344 YTHDC1Q96MU7 727 aaKnown RBP17.98■□□□□ 0.47
RGS3-221ENST00000487344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.94■□□□□ 0.46
RGS3-221ENST00000487344 DCAF1Q9Y4B6 1507 aa17.86■□□□□ 0.45
RGS3-221ENST00000487344 CECR2Q9BXF3 1484 aa17.82■□□□□ 0.44
RGS3-221ENST00000487344 MYO15BQ96JP2 1530 aa17.81■□□□□ 0.44
RGS3-221ENST00000487344 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
RGS3-221ENST00000487344 HNRNPUL2Q1KMD3 747 aaKnown RBP17.79■□□□□ 0.44
RGS3-221ENST00000487344 DIEXFQ68CQ4 756 aaKnown RBP17.78■□□□□ 0.44
RGS3-221ENST00000487344 ATP1B4Q9UN42 357 aaPredicted RBP17.72■□□□□ 0.43
RGS3-221ENST00000487344 MYT1Q01538 1121 aa17.66■□□□□ 0.42
RGS3-221ENST00000487344 ITGAEP38570 1179 aa17.58■□□□□ 0.4
RGS3-221ENST00000487344 RSF1Q96T23 1441 aaPredicted RBP17.54■□□□□ 0.4
RGS3-221ENST00000487344 GTF3C3Q9Y5Q9 886 aa17.54■□□□□ 0.4
RGS3-221ENST00000487344 FBLN2P98095 1184 aa17.54■□□□□ 0.4
RGS3-221ENST00000487344 NEFLP07196 543 aa17.53■□□□□ 0.4
RGS3-221ENST00000487344 BAZ1BQ9UIG0 1483 aaKnown RBP17.51■□□□□ 0.39
RGS3-221ENST00000487344 MROH2BQ7Z745 1585 aa17.48■□□□□ 0.39
RGS3-221ENST00000487344 ACIN1Q9UKV3 1341 aaKnown RBP17.47■□□□□ 0.39
RGS3-221ENST00000487344 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
RGS3-221ENST00000487344 ZNF316A6NFI3 1004 aaPredicted RBP17.43■□□□□ 0.38
RGS3-221ENST00000487344 BAZ1AQ9NRL2 1556 aaPredicted RBP17.41■□□□□ 0.38
RGS3-221ENST00000487344 ERICH6Q7L0X2 663 aa17.41■□□□□ 0.38
RGS3-221ENST00000487344 BICRAQ9NZM4 1560 aa17.37■□□□□ 0.37
RGS3-221ENST00000487344 ERCC6Q03468 1493 aa17.34■□□□□ 0.37
RGS3-221ENST00000487344 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
RGS3-221ENST00000487344 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
RGS3-221ENST00000487344 ATAD2BQ9ULI0 1458 aa17.28■□□□□ 0.36
RGS3-221ENST00000487344 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
RGS3-221ENST00000487344 WIZO95785 1651 aa17.22■□□□□ 0.35
RGS3-221ENST00000487344 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
RGS3-221ENST00000487344 UNC13AQ9UPW8 1703 aa17.2■□□□□ 0.34
RGS3-221ENST00000487344 FAM50AQ14320 339 aaKnown RBP17.18■□□□□ 0.34
RGS3-221ENST00000487344 SMARCA2P51531 1590 aa17.17■□□□□ 0.34
RGS3-221ENST00000487344 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
RGS3-221ENST00000487344 CCDC88BA6NC98 1476 aa17.07■□□□□ 0.32
RGS3-221ENST00000487344 BCANQ96GW7 911 aa17.05■□□□□ 0.32
RGS3-221ENST00000487344 NESP48681 1621 aa17.03■□□□□ 0.32
RGS3-221ENST00000487344 ARID3CA6NKF2 412 aa17.03■□□□□ 0.32
RGS3-221ENST00000487344 CADPSQ9ULU8 1353 aa17.02■□□□□ 0.32
RGS3-221ENST00000487344 CEP162Q5TB80 1403 aa17.02■□□□□ 0.32
RGS3-221ENST00000487344 P3H3Q8IVL6 736 aa17.01■□□□□ 0.31
RGS3-221ENST00000487344 POLR3GLQ9BT43 218 aa17.01■□□□□ 0.31
RGS3-221ENST00000487344 NCAPD3P42695 1498 aa17■□□□□ 0.31
RGS3-221ENST00000487344 MIER1Q8N108 512 aa16.99■□□□□ 0.31
RGS3-221ENST00000487344 CHMP7Q8WUX9 453 aaPredicted RBP16.98■□□□□ 0.31
RGS3-221ENST00000487344 PDS5BQ9NTI5 1447 aa16.97■□□□□ 0.31
RGS3-221ENST00000487344 CNGB1Q14028 1251 aaPredicted RBP16.97■□□□□ 0.31
RGS3-221ENST00000487344 ANP32CO43423 234 aa16.96■□□□□ 0.31
RGS3-221ENST00000487344 CLIP1P30622 1438 aa16.93■□□□□ 0.3
RGS3-221ENST00000487344 EEA1Q15075 1411 aa16.93■□□□□ 0.3
RGS3-221ENST00000487344 TNIKQ9UKE5 1360 aa16.91■□□□□ 0.3
RGS3-221ENST00000487344 TRIM52Q96A61 297 aa16.9■□□□□ 0.3
RGS3-221ENST00000487344 TOP2AP11388 1531 aaKnown RBP16.88■□□□□ 0.29
RGS3-221ENST00000487344 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
RGS3-221ENST00000487344 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
RGS3-221ENST00000487344 CLSPNQ9HAW4 1339 aa16.87■□□□□ 0.29
RGS3-221ENST00000487344 WRNQ14191 1432 aaPredicted RBP eCLIP16.86■□□□□ 0.29
RGS3-221ENST00000487344 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
RGS3-221ENST00000487344 DDX10Q13206 875 aaKnown RBP16.81■□□□□ 0.28
RGS3-221ENST00000487344 ABCC8Q09428 1581 aa16.79■□□□□ 0.28
RGS3-221ENST00000487344 CEP164Q9UPV0 1460 aa16.78■□□□□ 0.28
RGS3-221ENST00000487344 SOGA1O94964 1423 aa16.77■□□□□ 0.27
RGS3-221ENST00000487344 FKBP8Q14318 412 aa16.77■□□□□ 0.27
RGS3-221ENST00000487344 MYT1LQ9UL68 1186 aa16.75■□□□□ 0.27
RGS3-221ENST00000487344 CDK11AQ9UQ88 783 aaPredicted RBP16.74■□□□□ 0.27
RGS3-221ENST00000487344 TONSLQ96HA7 1378 aa16.68■□□□□ 0.26
RGS3-221ENST00000487344 CUX2O14529 1486 aa16.68■□□□□ 0.26
RGS3-221ENST00000487344 ZNF326Q5BKZ1 582 aaKnown RBP16.66■□□□□ 0.26
RGS3-221ENST00000487344 HMGXB3Q12766 1538 aa16.65■□□□□ 0.26
RGS3-221ENST00000487344 DAXXQ9UER7 740 aaPredicted RBP16.64■□□□□ 0.25
RGS3-221ENST00000487344 HNRNPUQ00839 825 aaKnown RBP eCLIP16.61■□□□□ 0.25
RGS3-221ENST00000487344 HIRIP3Q9BW71 556 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms