RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 NISCHQ9Y2I1 1504 aa25.49■■□□□ 1.67
TMEM39B-208ENST00000487305 CCDC180Q9P1Z9 1646 aa21.81■■□□□ 1.08
TMEM39B-208ENST00000487305 ZCCHC6Q5VYS8 1495 aaKnown RBP21.6■■□□□ 1.05
TMEM39B-208ENST00000487305 SHROOM4Q9ULL8 1493 aa21.33■■□□□ 1.01
TMEM39B-208ENST00000487305 DCAF1Q9Y4B6 1507 aa21.16■□□□□ 0.98
TMEM39B-208ENST00000487305 SUPT5HO00267 1087 aaKnown RBP21.06■□□□□ 0.96
TMEM39B-208ENST00000487305 CHIC1Q5VXU3 224 aa20.71■□□□□ 0.91
TMEM39B-208ENST00000487305 DCAF8L2P0C7V8 631 aa20.67■□□□□ 0.9
TMEM39B-208ENST00000487305 MYO15BQ96JP2 1530 aa20.58■□□□□ 0.89
TMEM39B-208ENST00000487305 ABCC9O60706 1549 aa20.4■□□□□ 0.86
TMEM39B-208ENST00000487305 HRCP23327 699 aa20.31■□□□□ 0.84
TMEM39B-208ENST00000487305 RSF1Q96T23 1441 aaPredicted RBP20.13■□□□□ 0.81
TMEM39B-208ENST00000487305 NACADO15069 1562 aa20.11■□□□□ 0.81
TMEM39B-208ENST00000487305 SCRIBQ14160 1630 aa20.08■□□□□ 0.81
TMEM39B-208ENST00000487305 RB1CC1Q8TDY2 1594 aa20.05■□□□□ 0.8
TMEM39B-208ENST00000487305 PCGF6Q9BYE7 350 aa20.04■□□□□ 0.8
TMEM39B-208ENST00000487305 TRIM26Q12899 539 aaPredicted RBP19.9■□□□□ 0.78
TMEM39B-208ENST00000487305 LOC105371045A0A1W2PR82 267 aa19.88■□□□□ 0.77
TMEM39B-208ENST00000487305 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
TMEM39B-208ENST00000487305 ZEB1P37275 1124 aaPredicted RBP19.73■□□□□ 0.75
TMEM39B-208ENST00000487305 MROH2BQ7Z745 1585 aa19.67■□□□□ 0.74
TMEM39B-208ENST00000487305 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
TMEM39B-208ENST00000487305 BAZ1AQ9NRL2 1556 aaPredicted RBP19.64■□□□□ 0.73
TMEM39B-208ENST00000487305 WIZO95785 1651 aa19.54■□□□□ 0.72
TMEM39B-208ENST00000487305 PPARGC1BQ86YN6 1023 aaKnown RBP19.49■□□□□ 0.71
TMEM39B-208ENST00000487305 EIF4G1Q04637 1599 aaKnown RBP19.47■□□□□ 0.71
TMEM39B-208ENST00000487305 TOP2AP11388 1531 aaKnown RBP19.44■□□□□ 0.7
TMEM39B-208ENST00000487305 SMARCA4P51532 1647 aa19.37■□□□□ 0.69
TMEM39B-208ENST00000487305 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
TMEM39B-208ENST00000487305 EEA1Q15075 1411 aa19.29■□□□□ 0.68
TMEM39B-208ENST00000487305 SMARCA2P51531 1590 aa19.26■□□□□ 0.67
TMEM39B-208ENST00000487305 CCDC88BA6NC98 1476 aa19.23■□□□□ 0.67
TMEM39B-208ENST00000487305 UNC13AQ9UPW8 1703 aa19.23■□□□□ 0.67
TMEM39B-208ENST00000487305 WRNQ14191 1432 aaPredicted RBP eCLIP19.23■□□□□ 0.67
TMEM39B-208ENST00000487305 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
TMEM39B-208ENST00000487305 TNIKQ9UKE5 1360 aa19.12■□□□□ 0.65
TMEM39B-208ENST00000487305 ABCC8Q09428 1581 aa19.07■□□□□ 0.64
TMEM39B-208ENST00000487305 CEP162Q5TB80 1403 aa19.03■□□□□ 0.64
TMEM39B-208ENST00000487305 BICRAQ9NZM4 1560 aa19■□□□□ 0.63
TMEM39B-208ENST00000487305 CSRNP3Q8WYN3 585 aa19■□□□□ 0.63
TMEM39B-208ENST00000487305 GOLGA3Q08378 1498 aa18.98■□□□□ 0.63
TMEM39B-208ENST00000487305 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
TMEM39B-208ENST00000487305 SOGA1O94964 1423 aa18.94■□□□□ 0.62
TMEM39B-208ENST00000487305 CCER1Q8TC90 406 aaPredicted RBP18.92■□□□□ 0.62
TMEM39B-208ENST00000487305 KIF21BO75037 1637 aa18.89■□□□□ 0.62
TMEM39B-208ENST00000487305 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
TMEM39B-208ENST00000487305 PELP1Q8IZL8 1130 aaKnown RBP18.86■□□□□ 0.61
TMEM39B-208ENST00000487305 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.6
TMEM39B-208ENST00000487305 ATAD2BQ9ULI0 1458 aa18.83■□□□□ 0.6
TMEM39B-208ENST00000487305 UBTFP17480 764 aaKnown RBP18.81■□□□□ 0.6
TMEM39B-208ENST00000487305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.8■□□□□ 0.6
TMEM39B-208ENST00000487305 RUSC2Q8N2Y8 1516 aa18.77■□□□□ 0.59
TMEM39B-208ENST00000487305 SYNJ1O43426 1573 aa18.75■□□□□ 0.59
TMEM39B-208ENST00000487305 PABPN1Q86U42 306 aaKnown RBP eCLIP18.72■□□□□ 0.59
TMEM39B-208ENST00000487305 CLIP1P30622 1438 aa18.68■□□□□ 0.58
TMEM39B-208ENST00000487305 VPS8Q8N3P4 1428 aa18.68■□□□□ 0.58
TMEM39B-208ENST00000487305 TOP2BQ02880 1626 aa18.67■□□□□ 0.58
TMEM39B-208ENST00000487305 DIEXFQ68CQ4 756 aaKnown RBP18.64■□□□□ 0.57
TMEM39B-208ENST00000487305 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
TMEM39B-208ENST00000487305 ERICH3Q5RHP9 1530 aa18.62■□□□□ 0.57
TMEM39B-208ENST00000487305 CENPBP07199 599 aaPredicted RBP18.61■□□□□ 0.57
TMEM39B-208ENST00000487305 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
TMEM39B-208ENST00000487305 HMGXB3Q12766 1538 aa18.6■□□□□ 0.57
TMEM39B-208ENST00000487305 APLP2Q06481 763 aa18.58■□□□□ 0.57
TMEM39B-208ENST00000487305 ACIN1Q9UKV3 1341 aaKnown RBP18.57■□□□□ 0.56
TMEM39B-208ENST00000487305 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
TMEM39B-208ENST00000487305 ZNF316A6NFI3 1004 aaPredicted RBP18.54■□□□□ 0.56
TMEM39B-208ENST00000487305 RAPGEF2Q9Y4G8 1499 aa18.53■□□□□ 0.56
TMEM39B-208ENST00000487305 CLSPNQ9HAW4 1339 aa18.52■□□□□ 0.56
TMEM39B-208ENST00000487305 PRXQ9BXM0 1461 aa18.5■□□□□ 0.55
TMEM39B-208ENST00000487305 TTBK1Q5TCY1 1321 aaPredicted RBP18.44■□□□□ 0.54
TMEM39B-208ENST00000487305 KIF27Q86VH2 1401 aa18.41■□□□□ 0.54
TMEM39B-208ENST00000487305 CFTRP13569 1480 aa18.38■□□□□ 0.53
TMEM39B-208ENST00000487305 NEUROD1Q13562 356 aa18.38■□□□□ 0.53
TMEM39B-208ENST00000487305 CUX1P39880 1505 aa18.34■□□□□ 0.53
TMEM39B-208ENST00000487305 PRDM2Q13029 1718 aa18.34■□□□□ 0.53
TMEM39B-208ENST00000487305 HNRNPUL2Q1KMD3 747 aaKnown RBP18.34■□□□□ 0.53
TMEM39B-208ENST00000487305 ARAP1Q96P48 1450 aa18.32■□□□□ 0.52
TMEM39B-208ENST00000487305 RRBP1Q9P2E9 1410 aaKnown RBP18.29■□□□□ 0.52
TMEM39B-208ENST00000487305 CUX2O14529 1486 aa18.27■□□□□ 0.51
TMEM39B-208ENST00000487305 MAP3K1Q13233 1512 aa18.26■□□□□ 0.51
TMEM39B-208ENST00000487305 GTF3C3Q9Y5Q9 886 aa18.24■□□□□ 0.51
TMEM39B-208ENST00000487305 DHX57Q6P158 1386 aaKnown RBP18.19■□□□□ 0.5
TMEM39B-208ENST00000487305 ARHGAP35Q9NRY4 1499 aa18.17■□□□□ 0.5
TMEM39B-208ENST00000487305 CCNB3Q8WWL7 1395 aa18.15■□□□□ 0.5
TMEM39B-208ENST00000487305 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
TMEM39B-208ENST00000487305 MIER1Q8N108 512 aa18.11■□□□□ 0.49
TMEM39B-208ENST00000487305 IGF1RP08069 1367 aa18.11■□□□□ 0.49
TMEM39B-208ENST00000487305 KANK4Q5T7N3 995 aaPredicted RBP18.09■□□□□ 0.49
TMEM39B-208ENST00000487305 RANGAP1P46060 587 aaPredicted RBP18.08■□□□□ 0.49
TMEM39B-208ENST00000487305 FHAD1B1AJZ9 1412 aa18.08■□□□□ 0.49
TMEM39B-208ENST00000487305 MYT1Q01538 1121 aa18.07■□□□□ 0.48
TMEM39B-208ENST00000487305 TIAM1Q13009 1591 aa18.06■□□□□ 0.48
TMEM39B-208ENST00000487305 CARMIL1Q5VZK9 1371 aa18.04■□□□□ 0.48
TMEM39B-208ENST00000487305 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
TMEM39B-208ENST00000487305 LRRC9Q6ZRR7 1453 aa17.98■□□□□ 0.47
TMEM39B-208ENST00000487305 TIMELESSQ9UNS1 1208 aa17.98■□□□□ 0.47
TMEM39B-208ENST00000487305 EFCAB5A4FU69 1503 aa17.98■□□□□ 0.47
TMEM39B-208ENST00000487305 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.97■□□□□ 0.47
TMEM39B-208ENST00000487305 CFAP43Q8NDM7 1665 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms