RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 AEBP2Q6ZN18 517 aaPredicted RBP13.83□□□□□ -0.2
SF1-217ENST00000486960 CHIC1Q5VXU3 224 aa13.5□□□□□ -0.25
SF1-217ENST00000486960 DNAJC5BQ9UF47 199 aa12.78□□□□□ -0.36
SF1-217ENST00000486960 ABCC9O60706 1549 aa12.45□□□□□ -0.42
SF1-217ENST00000486960 DNAJC5Q9H3Z4 198 aa12.4□□□□□ -0.42
SF1-217ENST00000486960 NISCHQ9Y2I1 1504 aa12.05□□□□□ -0.48
SF1-217ENST00000486960 SENP3Q9H4L4 574 aaPredicted RBP11.86□□□□□ -0.51
SF1-217ENST00000486960 PHF23Q9BUL5 403 aaPredicted RBP11.81□□□□□ -0.52
SF1-217ENST00000486960 SLC24A1O60721 1099 aa11.54□□□□□ -0.56
SF1-217ENST00000486960 TRIM41Q8WV44 630 aa11.37□□□□□ -0.59
SF1-217ENST00000486960 PABPN1Q86U42 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
SF1-217ENST00000486960 CCDC180Q9P1Z9 1646 aa11.35□□□□□ -0.59
SF1-217ENST00000486960 UNC13AQ9UPW8 1703 aa11.32□□□□□ -0.6
SF1-217ENST00000486960 CECR2Q9BXF3 1484 aa11.28□□□□□ -0.6
SF1-217ENST00000486960 RB1CC1Q8TDY2 1594 aa11.27□□□□□ -0.61
SF1-217ENST00000486960 CC2D2AQ9P2K1 1620 aa11.23□□□□□ -0.61
SF1-217ENST00000486960 BICRAQ9NZM4 1560 aa11.18□□□□□ -0.62
SF1-217ENST00000486960 CUX2O14529 1486 aa11.1□□□□□ -0.63
SF1-217ENST00000486960 PLPPR3Q6T4P5 718 aa11□□□□□ -0.65
SF1-217ENST00000486960 FOXD1Q16676 465 aa10.95□□□□□ -0.66
SF1-217ENST00000486960 NACADO15069 1562 aa10.9□□□□□ -0.66
SF1-217ENST00000486960 EIF4G1Q04637 1599 aaKnown RBP10.9□□□□□ -0.67
SF1-217ENST00000486960 EHMT2Q96KQ7 1210 aa10.89□□□□□ -0.67
SF1-217ENST00000486960 ILDR1Q86SU0 546 aaPredicted RBP10.86□□□□□ -0.67
SF1-217ENST00000486960 ERCC6Q03468 1493 aa10.7□□□□□ -0.7
SF1-217ENST00000486960 SHROOM4Q9ULL8 1493 aa10.64□□□□□ -0.71
SF1-217ENST00000486960 THOC2Q8NI27 1593 aaKnown RBP10.59□□□□□ -0.71
SF1-217ENST00000486960 RIMBP3CA6NJZ7 1639 aa10.55□□□□□ -0.72
SF1-217ENST00000486960 RIMBP3BA6NNM3 1639 aa10.55□□□□□ -0.72
SF1-217ENST00000486960 RIMBP3Q9UFD9 1639 aa10.55□□□□□ -0.72
SF1-217ENST00000486960 ADRA2BP18089 450 aa10.51□□□□□ -0.73
SF1-217ENST00000486960 DCAF8L2P0C7V8 631 aa10.49□□□□□ -0.73
SF1-217ENST00000486960 BAZ1AQ9NRL2 1556 aaPredicted RBP10.48□□□□□ -0.73
SF1-217ENST00000486960 PPP6R1Q9UPN7 881 aa10.47□□□□□ -0.73
SF1-217ENST00000486960 NESP48681 1621 aa10.44□□□□□ -0.74
SF1-217ENST00000486960 AMER1Q5JTC6 1135 aaPredicted RBP10.43□□□□□ -0.74
SF1-217ENST00000486960 RTN4Q9NQC3 1192 aaKnown RBP10.41□□□□□ -0.74
SF1-217ENST00000486960 DAXXQ9UER7 740 aaPredicted RBP10.41□□□□□ -0.74
SF1-217ENST00000486960 TRHP20396 242 aaPredicted RBP10.4□□□□□ -0.74
SF1-217ENST00000486960 PIAS4Q8N2W9 510 aaPredicted RBP10.4□□□□□ -0.74
SF1-217ENST00000486960 NCBP3Q53F19 620 aaKnown RBP10.37□□□□□ -0.75
SF1-217ENST00000486960 MYO15BQ96JP2 1530 aa10.35□□□□□ -0.75
SF1-217ENST00000486960 ARHGEF11O15085 1522 aa10.33□□□□□ -0.76
SF1-217ENST00000486960 SMARCA2P51531 1590 aa10.33□□□□□ -0.76
SF1-217ENST00000486960 KIF21AQ7Z4S6 1674 aa10.33□□□□□ -0.76
SF1-217ENST00000486960 SCRIBQ14160 1630 aa10.31□□□□□ -0.76
SF1-217ENST00000486960 OSCARQ8IYS5 282 aa10.3□□□□□ -0.76
SF1-217ENST00000486960 MSH5O43196 834 aa10.21□□□□□ -0.77
SF1-217ENST00000486960 CYB5RLQ6IPT4 315 aa10.2□□□□□ -0.78
SF1-217ENST00000486960 ARAP1Q96P48 1450 aa10.19□□□□□ -0.78
SF1-217ENST00000486960 CSRNP3Q8WYN3 585 aa10.17□□□□□ -0.78
SF1-217ENST00000486960 LMTK3Q96Q04 1460 aa10.16□□□□□ -0.78
SF1-217ENST00000486960 KCNA4P22459 653 aa10.13□□□□□ -0.79
SF1-217ENST00000486960 ILDR2Q71H61 639 aa10.13□□□□□ -0.79
SF1-217ENST00000486960 SOCS7O14512 581 aa10.11□□□□□ -0.79
SF1-217ENST00000486960 WDR62O43379 1518 aa10.09□□□□□ -0.79
SF1-217ENST00000486960 NCAPD3P42695 1498 aa10.09□□□□□ -0.79
SF1-217ENST00000486960 LAMC3Q9Y6N6 1575 aa10.06□□□□□ -0.8
SF1-217ENST00000486960 KDM4FA0A1W2PPD8 638 aa10.04□□□□□ -0.8
SF1-217ENST00000486960 ERCC6L2Q5T890 1561 aa10.01□□□□□ -0.81
SF1-217ENST00000486960 MRC2Q9UBG0 1479 aa10.01□□□□□ -0.81
SF1-217ENST00000486960 FBXO41Q8TF61 875 aa10□□□□□ -0.81
SF1-217ENST00000486960 HECW2Q9P2P5 1572 aa9.97□□□□□ -0.81
SF1-217ENST00000486960 ARXQ96QS3 562 aa9.96□□□□□ -0.82
SF1-217ENST00000486960 HMGXB3Q12766 1538 aa9.94□□□□□ -0.82
SF1-217ENST00000486960 ATAD2BQ9ULI0 1458 aa9.94□□□□□ -0.82
SF1-217ENST00000486960 PDS5BQ9NTI5 1447 aa9.93□□□□□ -0.82
SF1-217ENST00000486960 TTBK1Q5TCY1 1321 aaPredicted RBP9.92□□□□□ -0.82
SF1-217ENST00000486960 CHD1O14646 1710 aa9.9□□□□□ -0.82
SF1-217ENST00000486960 KIF13AQ9H1H9 1805 aa9.86□□□□□ -0.83
SF1-217ENST00000486960 SMARCA4P51532 1647 aa9.85□□□□□ -0.83
SF1-217ENST00000486960 PRKCSHP14314 528 aaPredicted RBP9.85□□□□□ -0.83
SF1-217ENST00000486960 DCAF1Q9Y4B6 1507 aa9.83□□□□□ -0.84
SF1-217ENST00000486960 DISP3Q9P2K9 1392 aa9.82□□□□□ -0.84
SF1-217ENST00000486960 SLC4A1APQ9BWU0 796 aaKnown RBP9.81□□□□□ -0.84
SF1-217ENST00000486960 RSF1Q96T23 1441 aaPredicted RBP9.81□□□□□ -0.84
SF1-217ENST00000486960 PELP1Q8IZL8 1130 aaKnown RBP9.8□□□□□ -0.84
SF1-217ENST00000486960 ZNF608Q9ULD9 1512 aaPredicted RBP9.8□□□□□ -0.84
SF1-217ENST00000486960 MYT1Q01538 1121 aa9.78□□□□□ -0.84
SF1-217ENST00000486960 ZCCHC6Q5VYS8 1495 aaKnown RBP9.77□□□□□ -0.85
SF1-217ENST00000486960 SYNJ2O15056 1496 aa9.75□□□□□ -0.85
SF1-217ENST00000486960 BAZ1BQ9UIG0 1483 aaKnown RBP9.73□□□□□ -0.85
SF1-217ENST00000486960 SPATA31D1Q6ZQQ2 1576 aa9.73□□□□□ -0.85
SF1-217ENST00000486960 BCANQ96GW7 911 aa9.73□□□□□ -0.85
SF1-217ENST00000486960 SCAF1Q9H7N4 1312 aaKnown RBP9.73□□□□□ -0.85
SF1-217ENST00000486960 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
SF1-217ENST00000486960 URB2Q14146 1524 aaKnown RBP9.72□□□□□ -0.85
SF1-217ENST00000486960 TAOK2Q9UL54 1235 aa9.71□□□□□ -0.86
SF1-217ENST00000486960 RANGAP1P46060 587 aaPredicted RBP9.7□□□□□ -0.86
SF1-217ENST00000486960 POTEDQ86YR6 584 aa9.7□□□□□ -0.86
SF1-217ENST00000486960 EIF4G3O43432 1585 aaKnown RBP9.69□□□□□ -0.86
SF1-217ENST00000486960 ADGRL1O94910 1474 aa9.69□□□□□ -0.86
SF1-217ENST00000486960 CLASP1Q7Z460 1538 aa9.69□□□□□ -0.86
SF1-217ENST00000486960 CADPSQ9ULU8 1353 aa9.68□□□□□ -0.86
SF1-217ENST00000486960 PPP4R3CPQ6ZMV5 832 aa9.67□□□□□ -0.86
SF1-217ENST00000486960 ERICH6Q7L0X2 663 aa9.67□□□□□ -0.86
SF1-217ENST00000486960 TIMELESSQ9UNS1 1208 aa9.66□□□□□ -0.86
SF1-217ENST00000486960 APLP2Q06481 763 aa9.65□□□□□ -0.86
SF1-217ENST00000486960 HOMEZQ8IX15 550 aa9.64□□□□□ -0.87
SF1-217ENST00000486960 FANCD2Q9BXW9 1451 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms