RNA–Protein interactions for RNA: ENST00000486402.1

CASK-213, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

TSL 3

Gene CASK, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-213ENST00000486402 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
CASK-213ENST00000486402 CHIC1Q5VXU3 224 aa26.31■■□□□ 1.8
CASK-213ENST00000486402 SENP3Q9H4L4 574 aaPredicted RBP24.16■■□□□ 1.46
CASK-213ENST00000486402 PHF23Q9BUL5 403 aaPredicted RBP23.76■■□□□ 1.39
CASK-213ENST00000486402 NISCHQ9Y2I1 1504 aa22.71■■□□□ 1.23
CASK-213ENST00000486402 FOXD1Q16676 465 aa22.7■■□□□ 1.22
CASK-213ENST00000486402 POTEDQ86YR6 584 aa22.51■■□□□ 1.19
CASK-213ENST00000486402 MSH5O43196 834 aa21.47■■□□□ 1.03
CASK-213ENST00000486402 PIAS4Q8N2W9 510 aaPredicted RBP20.99■□□□□ 0.95
CASK-213ENST00000486402 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.89
CASK-213ENST00000486402 ADRA2BP18089 450 aa20.47■□□□□ 0.87
CASK-213ENST00000486402 PLPPR3Q6T4P5 718 aa20.32■□□□□ 0.84
CASK-213ENST00000486402 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
CASK-213ENST00000486402 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
CASK-213ENST00000486402 MAPK8IP2Q13387 824 aaPredicted RBP19.07■□□□□ 0.64
CASK-213ENST00000486402 DMRT2Q9Y5R5 561 aa19.05■□□□□ 0.64
CASK-213ENST00000486402 CACNB1Q02641 598 aaPredicted RBP18.99■□□□□ 0.63
CASK-213ENST00000486402 DCAF1Q9Y4B6 1507 aa18.95■□□□□ 0.62
CASK-213ENST00000486402 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
CASK-213ENST00000486402 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
CASK-213ENST00000486402 MYO15BQ96JP2 1530 aa18.52■□□□□ 0.56
CASK-213ENST00000486402 SUPT5HO00267 1087 aaKnown RBP18.39■□□□□ 0.53
CASK-213ENST00000486402 DCAF8L1A6NGE4 600 aa18.35■□□□□ 0.53
CASK-213ENST00000486402 DCAF8L2P0C7V8 631 aa18.3■□□□□ 0.52
CASK-213ENST00000486402 RNF39Q9H2S5 420 aa18.29■□□□□ 0.52
CASK-213ENST00000486402 ABCC9O60706 1549 aa18.13■□□□□ 0.49
CASK-213ENST00000486402 NACADO15069 1562 aa18.1■□□□□ 0.49
CASK-213ENST00000486402 HOXD11P31277 338 aaPredicted RBP18■□□□□ 0.47
CASK-213ENST00000486402 C1QBPQ07021 282 aaKnown RBP17.92■□□□□ 0.46
CASK-213ENST00000486402 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
CASK-213ENST00000486402 RSF1Q96T23 1441 aaPredicted RBP17.82■□□□□ 0.44
CASK-213ENST00000486402 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
CASK-213ENST00000486402 PPP4R3CPQ6ZMV5 832 aa17.74■□□□□ 0.43
CASK-213ENST00000486402 RNF216Q9NWF9 866 aaPredicted RBP17.62■□□□□ 0.41
CASK-213ENST00000486402 CNKSR2Q8WXI2 1034 aa17.56■□□□□ 0.4
CASK-213ENST00000486402 BAZ1AQ9NRL2 1556 aaPredicted RBP17.55■□□□□ 0.4
CASK-213ENST00000486402 MROH2BQ7Z745 1585 aa17.47■□□□□ 0.39
CASK-213ENST00000486402 DNAJC5BQ9UF47 199 aa17.45■□□□□ 0.38
CASK-213ENST00000486402 POTEHQ6S545 545 aa17.44■□□□□ 0.38
CASK-213ENST00000486402 CECR2Q9BXF3 1484 aa17.44■□□□□ 0.38
CASK-213ENST00000486402 HRCP23327 699 aa17.41■□□□□ 0.38
CASK-213ENST00000486402 TRIM41Q8WV44 630 aa17.39■□□□□ 0.37
CASK-213ENST00000486402 WIZO95785 1651 aa17.35■□□□□ 0.37
CASK-213ENST00000486402 TOP2AP11388 1531 aaKnown RBP17.33■□□□□ 0.37
CASK-213ENST00000486402 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
CASK-213ENST00000486402 UNC13AQ9UPW8 1703 aa17.27■□□□□ 0.36
CASK-213ENST00000486402 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.35
CASK-213ENST00000486402 TRIM26Q12899 539 aaPredicted RBP17.25■□□□□ 0.35
CASK-213ENST00000486402 LOC105371045A0A1W2PR82 267 aa17.24■□□□□ 0.35
CASK-213ENST00000486402 PCGF6Q9BYE7 350 aa17.24■□□□□ 0.35
CASK-213ENST00000486402 PEG3Q9GZU2 1588 aa17.17■□□□□ 0.34
CASK-213ENST00000486402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.34
CASK-213ENST00000486402 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
CASK-213ENST00000486402 EEA1Q15075 1411 aa17.09■□□□□ 0.33
CASK-213ENST00000486402 ZEB1P37275 1124 aaPredicted RBP17.08■□□□□ 0.32
CASK-213ENST00000486402 BICRAQ9NZM4 1560 aa17.07■□□□□ 0.32
CASK-213ENST00000486402 CCDC88BA6NC98 1476 aa17.07■□□□□ 0.32
CASK-213ENST00000486402 FAM9AQ8IZU1 332 aaPredicted RBP16.89■□□□□ 0.29
CASK-213ENST00000486402 WRNQ14191 1432 aaPredicted RBP eCLIP16.88■□□□□ 0.29
CASK-213ENST00000486402 DSG3P32926 999 aa16.85■□□□□ 0.29
CASK-213ENST00000486402 ATAD2BQ9ULI0 1458 aa16.85■□□□□ 0.29
CASK-213ENST00000486402 ABCC8Q09428 1581 aa16.83■□□□□ 0.28
CASK-213ENST00000486402 TNIKQ9UKE5 1360 aa16.83■□□□□ 0.28
CASK-213ENST00000486402 BAZ1BQ9UIG0 1483 aaKnown RBP16.81■□□□□ 0.28
CASK-213ENST00000486402 SPINK5Q9NQ38 1064 aaPredicted RBP16.79■□□□□ 0.28
CASK-213ENST00000486402 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
CASK-213ENST00000486402 GOLGA3Q08378 1498 aa16.75■□□□□ 0.27
CASK-213ENST00000486402 CAPN15O75808 1086 aa16.75■□□□□ 0.27
CASK-213ENST00000486402 PABPN1Q86U42 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
CASK-213ENST00000486402 CSRNP3Q8WYN3 585 aa16.73■□□□□ 0.27
CASK-213ENST00000486402 HMGXB3Q12766 1538 aa16.73■□□□□ 0.27
CASK-213ENST00000486402 KIF21BO75037 1637 aa16.73■□□□□ 0.27
CASK-213ENST00000486402 CEP162Q5TB80 1403 aa16.71■□□□□ 0.27
CASK-213ENST00000486402 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
CASK-213ENST00000486402 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.27
CASK-213ENST00000486402 SOGA1O94964 1423 aa16.68■□□□□ 0.26
CASK-213ENST00000486402 NCAPD3P42695 1498 aa16.66■□□□□ 0.26
CASK-213ENST00000486402 SYNJ1O43426 1573 aa16.63■□□□□ 0.25
CASK-213ENST00000486402 TOP2BQ02880 1626 aa16.62■□□□□ 0.25
CASK-213ENST00000486402 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
CASK-213ENST00000486402 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
CASK-213ENST00000486402 NPM3O75607 178 aaKnown RBP16.58■□□□□ 0.24
CASK-213ENST00000486402 ERICH3Q5RHP9 1530 aa16.53■□□□□ 0.24
CASK-213ENST00000486402 UBTFP17480 764 aaKnown RBP16.52■□□□□ 0.24
CASK-213ENST00000486402 RUSC2Q8N2Y8 1516 aa16.5■□□□□ 0.23
CASK-213ENST00000486402 EHMT2Q96KQ7 1210 aa16.48■□□□□ 0.23
CASK-213ENST00000486402 PRDM2Q13029 1718 aa16.47■□□□□ 0.23
CASK-213ENST00000486402 CLIP1P30622 1438 aa16.45■□□□□ 0.22
CASK-213ENST00000486402 CFTRP13569 1480 aa16.45■□□□□ 0.22
CASK-213ENST00000486402 VPS8Q8N3P4 1428 aa16.45■□□□□ 0.22
CASK-213ENST00000486402 CCER1Q8TC90 406 aaPredicted RBP16.39■□□□□ 0.21
CASK-213ENST00000486402 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
CASK-213ENST00000486402 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
CASK-213ENST00000486402 ABCB7O75027 752 aa16.35■□□□□ 0.21
CASK-213ENST00000486402 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
CASK-213ENST00000486402 APLP2Q06481 763 aa16.33■□□□□ 0.2
CASK-213ENST00000486402 CUX1P39880 1505 aa16.32■□□□□ 0.2
CASK-213ENST00000486402 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
CASK-213ENST00000486402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.24■□□□□ 0.19
CASK-213ENST00000486402 CADPSQ9ULU8 1353 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms