RNA–Protein interactions for RNA: ENST00000485840.1

PAX8-210, Transcript of paired box 8, humanhuman

TSL 2

Gene PAX8, Length 2,757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-210ENST00000485840 NISCHQ9Y2I1 1504 aa28.6■■■□□ 2.17
PAX8-210ENST00000485840 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
PAX8-210ENST00000485840 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
PAX8-210ENST00000485840 SUPT5HO00267 1087 aaKnown RBP24.87■■□□□ 1.57
PAX8-210ENST00000485840 ZCCHC6Q5VYS8 1495 aaKnown RBP24.08■■□□□ 1.44
PAX8-210ENST00000485840 CCDC180Q9P1Z9 1646 aa23.86■■□□□ 1.41
PAX8-210ENST00000485840 CHIC1Q5VXU3 224 aa23.71■■□□□ 1.39
PAX8-210ENST00000485840 MYO15BQ96JP2 1530 aa23.53■■□□□ 1.36
PAX8-210ENST00000485840 LOC105371045A0A1W2PR82 267 aa23.4■■□□□ 1.34
PAX8-210ENST00000485840 PCGF6Q9BYE7 350 aa23.32■■□□□ 1.32
PAX8-210ENST00000485840 EHMT2Q96KQ7 1210 aa23.32■■□□□ 1.32
PAX8-210ENST00000485840 FAM9AQ8IZU1 332 aaPredicted RBP23.14■■□□□ 1.3
PAX8-210ENST00000485840 ABCC9O60706 1549 aa23.11■■□□□ 1.29
PAX8-210ENST00000485840 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
PAX8-210ENST00000485840 DCAF1Q9Y4B6 1507 aa23.02■■□□□ 1.28
PAX8-210ENST00000485840 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
PAX8-210ENST00000485840 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
PAX8-210ENST00000485840 HRCP23327 699 aa22.88■■□□□ 1.25
PAX8-210ENST00000485840 RSF1Q96T23 1441 aaPredicted RBP22.81■■□□□ 1.24
PAX8-210ENST00000485840 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
PAX8-210ENST00000485840 RB1CC1Q8TDY2 1594 aa22.56■■□□□ 1.2
PAX8-210ENST00000485840 TRIM26Q12899 539 aaPredicted RBP22.48■■□□□ 1.19
PAX8-210ENST00000485840 TTBK1Q5TCY1 1321 aaPredicted RBP22.46■■□□□ 1.19
PAX8-210ENST00000485840 PABPN1Q86U42 306 aaKnown RBP eCLIP22.43■■□□□ 1.18
PAX8-210ENST00000485840 MROH2BQ7Z745 1585 aa22.42■■□□□ 1.18
PAX8-210ENST00000485840 NACADO15069 1562 aa22.31■■□□□ 1.16
PAX8-210ENST00000485840 WIZO95785 1651 aa22.28■■□□□ 1.16
PAX8-210ENST00000485840 RANGAP1P46060 587 aaPredicted RBP22.03■■□□□ 1.12
PAX8-210ENST00000485840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.99■■□□□ 1.11
PAX8-210ENST00000485840 ABCC8Q09428 1581 aa21.97■■□□□ 1.11
PAX8-210ENST00000485840 UBTFP17480 764 aaKnown RBP21.97■■□□□ 1.11
PAX8-210ENST00000485840 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
PAX8-210ENST00000485840 CCDC88BA6NC98 1476 aa21.88■■□□□ 1.09
PAX8-210ENST00000485840 CCER1Q8TC90 406 aaPredicted RBP21.85■■□□□ 1.09
PAX8-210ENST00000485840 SOGA1O94964 1423 aa21.83■■□□□ 1.08
PAX8-210ENST00000485840 ZEB1P37275 1124 aaPredicted RBP21.77■■□□□ 1.08
PAX8-210ENST00000485840 RUSC2Q8N2Y8 1516 aa21.73■■□□□ 1.07
PAX8-210ENST00000485840 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
PAX8-210ENST00000485840 CSRNP3Q8WYN3 585 aa21.71■■□□□ 1.07
PAX8-210ENST00000485840 TOP2AP11388 1531 aaKnown RBP21.68■■□□□ 1.06
PAX8-210ENST00000485840 SMARCA2P51531 1590 aa21.64■■□□□ 1.05
PAX8-210ENST00000485840 UNC13AQ9UPW8 1703 aa21.63■■□□□ 1.05
PAX8-210ENST00000485840 CEP162Q5TB80 1403 aa21.59■■□□□ 1.05
PAX8-210ENST00000485840 HNRNPUL2Q1KMD3 747 aaKnown RBP21.56■■□□□ 1.04
PAX8-210ENST00000485840 EIF4G1Q04637 1599 aaKnown RBP21.52■■□□□ 1.04
PAX8-210ENST00000485840 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
PAX8-210ENST00000485840 WRNQ14191 1432 aaPredicted RBP eCLIP21.48■■□□□ 1.03
PAX8-210ENST00000485840 TNIKQ9UKE5 1360 aa21.39■■□□□ 1.02
PAX8-210ENST00000485840 APLP2Q06481 763 aa21.37■■□□□ 1.01
PAX8-210ENST00000485840 BAZ1BQ9UIG0 1483 aaKnown RBP21.36■■□□□ 1.01
PAX8-210ENST00000485840 ATAD2BQ9ULI0 1458 aa21.34■■□□□ 1.01
PAX8-210ENST00000485840 GOLGA3Q08378 1498 aa21.28■■□□□ 1
PAX8-210ENST00000485840 DIEXFQ68CQ4 756 aaKnown RBP21.27■■□□□ 1
PAX8-210ENST00000485840 SYNJ1O43426 1573 aa21.26■□□□□ 0.99
PAX8-210ENST00000485840 SCAF1Q9H7N4 1312 aaKnown RBP21.23■□□□□ 0.99
PAX8-210ENST00000485840 CLIP1P30622 1438 aa21.22■□□□□ 0.99
PAX8-210ENST00000485840 YTHDC1Q96MU7 727 aaKnown RBP21.2■□□□□ 0.98
PAX8-210ENST00000485840 RAPGEF2Q9Y4G8 1499 aa21.19■□□□□ 0.98
PAX8-210ENST00000485840 EEA1Q15075 1411 aa21.19■□□□□ 0.98
PAX8-210ENST00000485840 ITGAEP38570 1179 aa21.18■□□□□ 0.98
PAX8-210ENST00000485840 CEP164Q9UPV0 1460 aa21.12■□□□□ 0.97
PAX8-210ENST00000485840 NEUROD1Q13562 356 aa21.08■□□□□ 0.97
PAX8-210ENST00000485840 ATP1B4Q9UN42 357 aaPredicted RBP21.08■□□□□ 0.96
PAX8-210ENST00000485840 KANK4Q5T7N3 995 aaPredicted RBP21.03■□□□□ 0.96
PAX8-210ENST00000485840 P3H3Q8IVL6 736 aa21.01■□□□□ 0.95
PAX8-210ENST00000485840 PEG3Q9GZU2 1588 aa21.01■□□□□ 0.95
PAX8-210ENST00000485840 ZNF316A6NFI3 1004 aaPredicted RBP20.99■□□□□ 0.95
PAX8-210ENST00000485840 VPS8Q8N3P4 1428 aa20.96■□□□□ 0.95
PAX8-210ENST00000485840 ACIN1Q9UKV3 1341 aaKnown RBP20.93■□□□□ 0.94
PAX8-210ENST00000485840 GTF3C3Q9Y5Q9 886 aa20.91■□□□□ 0.94
PAX8-210ENST00000485840 MIER1Q8N108 512 aa20.87■□□□□ 0.93
PAX8-210ENST00000485840 KIF21BO75037 1637 aa20.86■□□□□ 0.93
PAX8-210ENST00000485840 CENPBP07199 599 aaPredicted RBP20.84■□□□□ 0.93
PAX8-210ENST00000485840 CUX1P39880 1505 aa20.81■□□□□ 0.92
PAX8-210ENST00000485840 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
PAX8-210ENST00000485840 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
PAX8-210ENST00000485840 NCAPD3P42695 1498 aa20.78■□□□□ 0.92
PAX8-210ENST00000485840 ARAP1Q96P48 1450 aa20.75■□□□□ 0.91
PAX8-210ENST00000485840 CUX2O14529 1486 aa20.74■□□□□ 0.91
PAX8-210ENST00000485840 FAM50AQ14320 339 aaKnown RBP20.74■□□□□ 0.91
PAX8-210ENST00000485840 PRXQ9BXM0 1461 aa20.71■□□□□ 0.91
PAX8-210ENST00000485840 CFTRP13569 1480 aa20.67■□□□□ 0.9
PAX8-210ENST00000485840 IGF1RP08069 1367 aa20.64■□□□□ 0.89
PAX8-210ENST00000485840 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
PAX8-210ENST00000485840 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
PAX8-210ENST00000485840 CARMIL1Q5VZK9 1371 aa20.61■□□□□ 0.89
PAX8-210ENST00000485840 HMGXB3Q12766 1538 aa20.59■□□□□ 0.89
PAX8-210ENST00000485840 BIVM-ERCC5R4GMW8 1640 aa20.58■□□□□ 0.89
PAX8-210ENST00000485840 DHX57Q6P158 1386 aaKnown RBP20.58■□□□□ 0.88
PAX8-210ENST00000485840 ARHGAP35Q9NRY4 1499 aa20.58■□□□□ 0.88
PAX8-210ENST00000485840 ARID3CA6NKF2 412 aa20.57■□□□□ 0.88
PAX8-210ENST00000485840 HIRIP3Q9BW71 556 aaPredicted RBP20.55■□□□□ 0.88
PAX8-210ENST00000485840 FGD5Q6ZNL6 1462 aa20.54■□□□□ 0.88
PAX8-210ENST00000485840 RAD54L2Q9Y4B4 1467 aa20.54■□□□□ 0.88
PAX8-210ENST00000485840 CCNB3Q8WWL7 1395 aa20.54■□□□□ 0.88
PAX8-210ENST00000485840 NESP48681 1621 aa20.53■□□□□ 0.88
PAX8-210ENST00000485840 SIN3AQ96ST3 1273 aa20.52■□□□□ 0.88
PAX8-210ENST00000485840 ERICH3Q5RHP9 1530 aa20.51■□□□□ 0.87
PAX8-210ENST00000485840 FHOD3Q2V2M9 1422 aa20.44■□□□□ 0.86
PAX8-210ENST00000485840 FANCD2Q9BXW9 1451 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms