RNA–Protein interactions for RNA: ENST00000485822.1

RGS3-220, Transcript of regulator of G protein signaling 3, humanhuman

TSL 2

Gene RGS3, Length 3,999 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGS3-220ENST00000485822 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
RGS3-220ENST00000485822 DCAF8L2P0C7V8 631 aa21.61■■□□□ 1.05
RGS3-220ENST00000485822 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
RGS3-220ENST00000485822 SUPT5HO00267 1087 aaKnown RBP20.05■□□□□ 0.8
RGS3-220ENST00000485822 ABCC9O60706 1549 aa19.91■□□□□ 0.78
RGS3-220ENST00000485822 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
RGS3-220ENST00000485822 EHMT2Q96KQ7 1210 aa19.25■□□□□ 0.67
RGS3-220ENST00000485822 CCDC180Q9P1Z9 1646 aa18.94■□□□□ 0.62
RGS3-220ENST00000485822 ZCCHC6Q5VYS8 1495 aaKnown RBP18.85■□□□□ 0.61
RGS3-220ENST00000485822 FAM9AQ8IZU1 332 aaPredicted RBP18.83■□□□□ 0.61
RGS3-220ENST00000485822 SCRIBQ14160 1630 aa18.76■□□□□ 0.59
RGS3-220ENST00000485822 PELP1Q8IZL8 1130 aaKnown RBP18.6■□□□□ 0.57
RGS3-220ENST00000485822 RANGAP1P46060 587 aaPredicted RBP18.5■□□□□ 0.55
RGS3-220ENST00000485822 TRIM41Q8WV44 630 aa18.4■□□□□ 0.54
RGS3-220ENST00000485822 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
RGS3-220ENST00000485822 TTBK1Q5TCY1 1321 aaPredicted RBP18.29■□□□□ 0.52
RGS3-220ENST00000485822 CECR2Q9BXF3 1484 aa18.21■□□□□ 0.51
RGS3-220ENST00000485822 NACADO15069 1562 aa18.21■□□□□ 0.51
RGS3-220ENST00000485822 MYT1Q01538 1121 aa18.21■□□□□ 0.51
RGS3-220ENST00000485822 CHIC1Q5VXU3 224 aa18.18■□□□□ 0.5
RGS3-220ENST00000485822 LOC105371045A0A1W2PR82 267 aa18.17■□□□□ 0.5
RGS3-220ENST00000485822 PPARGC1BQ86YN6 1023 aaKnown RBP18.05■□□□□ 0.48
RGS3-220ENST00000485822 RSF1Q96T23 1441 aaPredicted RBP17.99■□□□□ 0.47
RGS3-220ENST00000485822 UBTFP17480 764 aaKnown RBP17.98■□□□□ 0.47
RGS3-220ENST00000485822 DCAF1Q9Y4B6 1507 aa17.96■□□□□ 0.47
RGS3-220ENST00000485822 ATP1B4Q9UN42 357 aaPredicted RBP17.89■□□□□ 0.45
RGS3-220ENST00000485822 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
RGS3-220ENST00000485822 DNAJC5BQ9UF47 199 aa17.82■□□□□ 0.44
RGS3-220ENST00000485822 FBLN2P98095 1184 aa17.71■□□□□ 0.43
RGS3-220ENST00000485822 HRCP23327 699 aa17.7■□□□□ 0.42
RGS3-220ENST00000485822 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
RGS3-220ENST00000485822 BAZ1BQ9UIG0 1483 aaKnown RBP17.62■□□□□ 0.41
RGS3-220ENST00000485822 PCGF6Q9BYE7 350 aa17.61■□□□□ 0.41
RGS3-220ENST00000485822 WIZO95785 1651 aa17.6■□□□□ 0.41
RGS3-220ENST00000485822 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
RGS3-220ENST00000485822 APLP2Q06481 763 aa17.55■□□□□ 0.4
RGS3-220ENST00000485822 P3H3Q8IVL6 736 aa17.53■□□□□ 0.4
RGS3-220ENST00000485822 ARID3CA6NKF2 412 aa17.51■□□□□ 0.39
RGS3-220ENST00000485822 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
RGS3-220ENST00000485822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.42■□□□□ 0.38
RGS3-220ENST00000485822 HNRNPUL2Q1KMD3 747 aaKnown RBP17.42■□□□□ 0.38
RGS3-220ENST00000485822 BICRAQ9NZM4 1560 aa17.42■□□□□ 0.38
RGS3-220ENST00000485822 ATAD2BQ9ULI0 1458 aa17.41■□□□□ 0.38
RGS3-220ENST00000485822 CSRNP3Q8WYN3 585 aa17.38■□□□□ 0.37
RGS3-220ENST00000485822 ITGAEP38570 1179 aa17.35■□□□□ 0.37
RGS3-220ENST00000485822 SMARCA4P51532 1647 aa17.34■□□□□ 0.37
RGS3-220ENST00000485822 ABCC8Q09428 1581 aa17.31■□□□□ 0.36
RGS3-220ENST00000485822 EIF4G1Q04637 1599 aaKnown RBP17.31■□□□□ 0.36
RGS3-220ENST00000485822 UNC13AQ9UPW8 1703 aa17.27■□□□□ 0.36
RGS3-220ENST00000485822 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
RGS3-220ENST00000485822 WRNQ14191 1432 aaPredicted RBP eCLIP17.21■□□□□ 0.35
RGS3-220ENST00000485822 SCAF1Q9H7N4 1312 aaKnown RBP17.2■□□□□ 0.34
RGS3-220ENST00000485822 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
RGS3-220ENST00000485822 NESP48681 1621 aa17.18■□□□□ 0.34
RGS3-220ENST00000485822 SOGA1O94964 1423 aa17.17■□□□□ 0.34
RGS3-220ENST00000485822 CC2D2AQ9P2K1 1620 aa17.15■□□□□ 0.34
RGS3-220ENST00000485822 TDRD9Q8NDG6 1382 aaKnown RBP17.13■□□□□ 0.33
RGS3-220ENST00000485822 TOP2AP11388 1531 aaKnown RBP17.11■□□□□ 0.33
RGS3-220ENST00000485822 CADPSQ9ULU8 1353 aa17.11■□□□□ 0.33
RGS3-220ENST00000485822 CHMP7Q8WUX9 453 aaPredicted RBP17.09■□□□□ 0.33
RGS3-220ENST00000485822 NCAPD3P42695 1498 aa17.03■□□□□ 0.32
RGS3-220ENST00000485822 RUSC2Q8N2Y8 1516 aa17.02■□□□□ 0.32
RGS3-220ENST00000485822 MYT1LQ9UL68 1186 aa16.98■□□□□ 0.31
RGS3-220ENST00000485822 CUX2O14529 1486 aa16.95■□□□□ 0.3
RGS3-220ENST00000485822 CCER1Q8TC90 406 aaPredicted RBP16.93■□□□□ 0.3
RGS3-220ENST00000485822 FAM50AQ14320 339 aaKnown RBP16.92■□□□□ 0.3
RGS3-220ENST00000485822 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
RGS3-220ENST00000485822 PDS5BQ9NTI5 1447 aa16.92■□□□□ 0.3
RGS3-220ENST00000485822 RAD54L2Q9Y4B4 1467 aa16.87■□□□□ 0.29
RGS3-220ENST00000485822 TRIM26Q12899 539 aaPredicted RBP16.87■□□□□ 0.29
RGS3-220ENST00000485822 ZNF777Q9ULD5 760 aaPredicted RBP16.83■□□□□ 0.28
RGS3-220ENST00000485822 KIF27Q86VH2 1401 aa16.83■□□□□ 0.28
RGS3-220ENST00000485822 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
RGS3-220ENST00000485822 BCL11AQ9H165 835 aa16.79■□□□□ 0.28
RGS3-220ENST00000485822 CARMIL1Q5VZK9 1371 aa16.78■□□□□ 0.28
RGS3-220ENST00000485822 KCNH8Q96L42 1107 aa16.76■□□□□ 0.27
RGS3-220ENST00000485822 AQRO60306 1485 aaKnown RBP eCLIP16.75■□□□□ 0.27
RGS3-220ENST00000485822 PRKCSHP14314 528 aaPredicted RBP16.74■□□□□ 0.27
RGS3-220ENST00000485822 CENPBP07199 599 aaPredicted RBP16.72■□□□□ 0.27
RGS3-220ENST00000485822 CFTRP13569 1480 aa16.72■□□□□ 0.27
RGS3-220ENST00000485822 CLIP1P30622 1438 aa16.71■□□□□ 0.27
RGS3-220ENST00000485822 CEP162Q5TB80 1403 aa16.7■□□□□ 0.26
RGS3-220ENST00000485822 FGD5Q6ZNL6 1462 aa16.7■□□□□ 0.26
RGS3-220ENST00000485822 CHIC2Q9UKJ5 165 aa16.67■□□□□ 0.26
RGS3-220ENST00000485822 RAPGEF2Q9Y4G8 1499 aa16.65■□□□□ 0.26
RGS3-220ENST00000485822 GTF3C3Q9Y5Q9 886 aa16.64■□□□□ 0.25
RGS3-220ENST00000485822 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
RGS3-220ENST00000485822 SYNJ1O43426 1573 aa16.63■□□□□ 0.25
RGS3-220ENST00000485822 ACIN1Q9UKV3 1341 aaKnown RBP16.62■□□□□ 0.25
RGS3-220ENST00000485822 GOLGA3Q08378 1498 aa16.61■□□□□ 0.25
RGS3-220ENST00000485822 PLPPR3Q6T4P5 718 aa16.61■□□□□ 0.25
RGS3-220ENST00000485822 ERICH6Q7L0X2 663 aa16.6■□□□□ 0.25
RGS3-220ENST00000485822 IGF1RP08069 1367 aa16.58■□□□□ 0.25
RGS3-220ENST00000485822 KANK4Q5T7N3 995 aaPredicted RBP16.57■□□□□ 0.24
RGS3-220ENST00000485822 TRIM52Q96A61 297 aa16.57■□□□□ 0.24
RGS3-220ENST00000485822 CUX1P39880 1505 aa16.57■□□□□ 0.24
RGS3-220ENST00000485822 NEUROD1Q13562 356 aa16.54■□□□□ 0.24
RGS3-220ENST00000485822 CNGB1Q14028 1251 aaPredicted RBP16.53■□□□□ 0.24
RGS3-220ENST00000485822 TNIKQ9UKE5 1360 aa16.53■□□□□ 0.24
RGS3-220ENST00000485822 JPH4Q96JJ6 628 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms