RNA–Protein interactions for RNA: ENST00000485069.1

SPEG-219, Transcript of SPEG complex locus, humanhuman

TSL 2

Gene SPEG, Length 2,159 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-219ENST00000485069 NISCHQ9Y2I1 1504 aa46.26■■■■■ 5
SPEG-219ENST00000485069 CCDC180Q9P1Z9 1646 aa39.59■■■■□ 3.93
SPEG-219ENST00000485069 ZCCHC6Q5VYS8 1495 aaKnown RBP39.21■■■■□ 3.87
SPEG-219ENST00000485069 SHROOM4Q9ULL8 1493 aa38.86■■■■□ 3.81
SPEG-219ENST00000485069 DCAF1Q9Y4B6 1507 aa38.24■■■■□ 3.71
SPEG-219ENST00000485069 SUPT5HO00267 1087 aaKnown RBP38.12■■■■□ 3.69
SPEG-219ENST00000485069 DCAF8L2P0C7V8 631 aa37.61■■■■□ 3.61
SPEG-219ENST00000485069 CHIC1Q5VXU3 224 aa37.36■■■■□ 3.57
SPEG-219ENST00000485069 MYO15BQ96JP2 1530 aa37.24■■■■□ 3.55
SPEG-219ENST00000485069 ABCC9O60706 1549 aa37.03■■■■□ 3.52
SPEG-219ENST00000485069 SCRIBQ14160 1630 aa36.68■■■■□ 3.46
SPEG-219ENST00000485069 RSF1Q96T23 1441 aaPredicted RBP36.51■■■■□ 3.44
SPEG-219ENST00000485069 NACADO15069 1562 aa36.47■■■■□ 3.43
SPEG-219ENST00000485069 HRCP23327 699 aa36.26■■■■□ 3.4
SPEG-219ENST00000485069 RB1CC1Q8TDY2 1594 aa36.26■■■■□ 3.4
SPEG-219ENST00000485069 LOC105371045A0A1W2PR82 267 aa35.99■■■■□ 3.35
SPEG-219ENST00000485069 PCGF6Q9BYE7 350 aa35.99■■■■□ 3.35
SPEG-219ENST00000485069 CECR2Q9BXF3 1484 aa35.88■■■■□ 3.33
SPEG-219ENST00000485069 MROH2BQ7Z745 1585 aa35.85■■■■□ 3.33
SPEG-219ENST00000485069 TRIM41Q8WV44 630 aa35.68■■■■□ 3.3
SPEG-219ENST00000485069 WIZO95785 1651 aa35.66■■■■□ 3.3
SPEG-219ENST00000485069 BAZ1AQ9NRL2 1556 aaPredicted RBP35.64■■■■□ 3.3
SPEG-219ENST00000485069 TRIM26Q12899 539 aaPredicted RBP35.56■■■■□ 3.28
SPEG-219ENST00000485069 EIF4G1Q04637 1599 aaKnown RBP35.46■■■■□ 3.27
SPEG-219ENST00000485069 UNC13AQ9UPW8 1703 aa35.3■■■■□ 3.24
SPEG-219ENST00000485069 TOP2AP11388 1531 aaKnown RBP35.27■■■■□ 3.24
SPEG-219ENST00000485069 SMARCA4P51532 1647 aa35.26■■■■□ 3.24
SPEG-219ENST00000485069 PPARGC1BQ86YN6 1023 aaKnown RBP35.18■■■■□ 3.22
SPEG-219ENST00000485069 FAM9AQ8IZU1 332 aaPredicted RBP35.11■■■■□ 3.21
SPEG-219ENST00000485069 SMARCA2P51531 1590 aa35.03■■■■□ 3.2
SPEG-219ENST00000485069 CCDC88BA6NC98 1476 aa34.95■■■■□ 3.19
SPEG-219ENST00000485069 ZEB1P37275 1124 aaPredicted RBP34.91■■■■□ 3.18
SPEG-219ENST00000485069 BICRAQ9NZM4 1560 aa34.8■■■■□ 3.16
SPEG-219ENST00000485069 ABCC8Q09428 1581 aa34.77■■■■□ 3.16
SPEG-219ENST00000485069 PEG3Q9GZU2 1588 aa34.77■■■■□ 3.16
SPEG-219ENST00000485069 EEA1Q15075 1411 aa34.59■■■■□ 3.13
SPEG-219ENST00000485069 EHMT2Q96KQ7 1210 aa34.58■■■■□ 3.13
SPEG-219ENST00000485069 WRNQ14191 1432 aaPredicted RBP eCLIP34.55■■■■□ 3.12
SPEG-219ENST00000485069 SOGA1O94964 1423 aa34.42■■■■□ 3.1
SPEG-219ENST00000485069 TNIKQ9UKE5 1360 aa34.41■■■■□ 3.1
SPEG-219ENST00000485069 CEP162Q5TB80 1403 aa34.37■■■■□ 3.09
SPEG-219ENST00000485069 PABPN1Q86U42 306 aaKnown RBP eCLIP34.31■■■■□ 3.08
SPEG-219ENST00000485069 ATAD2BQ9ULI0 1458 aa34.26■■■■□ 3.08
SPEG-219ENST00000485069 CSRNP3Q8WYN3 585 aa34.23■■■■□ 3.07
SPEG-219ENST00000485069 RUSC2Q8N2Y8 1516 aa34.22■■■■□ 3.07
SPEG-219ENST00000485069 GOLGA3Q08378 1498 aa34.21■■■■□ 3.07
SPEG-219ENST00000485069 SYNJ1O43426 1573 aa34.16■■■■□ 3.06
SPEG-219ENST00000485069 BAZ1BQ9UIG0 1483 aaKnown RBP34.13■■■■□ 3.05
SPEG-219ENST00000485069 KIF21BO75037 1637 aa34.13■■■■□ 3.05
SPEG-219ENST00000485069 CEP164Q9UPV0 1460 aa34.04■■■■□ 3.04
SPEG-219ENST00000485069 UBTFP17480 764 aaKnown RBP33.91■■■■□ 3.02
SPEG-219ENST00000485069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.89■■■■□ 3.02
SPEG-219ENST00000485069 TOP2BQ02880 1626 aa33.86■■■■□ 3.01
SPEG-219ENST00000485069 CCER1Q8TC90 406 aaPredicted RBP33.86■■■■□ 3.01
SPEG-219ENST00000485069 BIVM-ERCC5R4GMW8 1640 aa33.82■■■■□ 3
SPEG-219ENST00000485069 HMGXB3Q12766 1538 aa33.78■■■■□ 3
SPEG-219ENST00000485069 CLIP1P30622 1438 aa33.71■■■□□ 2.99
SPEG-219ENST00000485069 NCAPD3P42695 1498 aa33.68■■■□□ 2.98
SPEG-219ENST00000485069 VPS8Q8N3P4 1428 aa33.67■■■□□ 2.98
SPEG-219ENST00000485069 RAPGEF2Q9Y4G8 1499 aa33.65■■■□□ 2.98
SPEG-219ENST00000485069 ERICH3Q5RHP9 1530 aa33.59■■■□□ 2.97
SPEG-219ENST00000485069 TTBK1Q5TCY1 1321 aaPredicted RBP33.55■■■□□ 2.96
SPEG-219ENST00000485069 PRXQ9BXM0 1461 aa33.49■■■□□ 2.95
SPEG-219ENST00000485069 CUX1P39880 1505 aa33.41■■■□□ 2.94
SPEG-219ENST00000485069 CFTRP13569 1480 aa33.39■■■□□ 2.94
SPEG-219ENST00000485069 PRDM2Q13029 1718 aa33.36■■■□□ 2.93
SPEG-219ENST00000485069 SCAF1Q9H7N4 1312 aaKnown RBP33.28■■■□□ 2.92
SPEG-219ENST00000485069 DIEXFQ68CQ4 756 aaKnown RBP33.27■■■□□ 2.92
SPEG-219ENST00000485069 ARAP1Q96P48 1450 aa33.25■■■□□ 2.91
SPEG-219ENST00000485069 KIF27Q86VH2 1401 aa33.24■■■□□ 2.91
SPEG-219ENST00000485069 APLP2Q06481 763 aa33.22■■■□□ 2.91
SPEG-219ENST00000485069 ZNF316A6NFI3 1004 aaPredicted RBP33.11■■■□□ 2.89
SPEG-219ENST00000485069 HNRNPUL2Q1KMD3 747 aaKnown RBP33.09■■■□□ 2.89
SPEG-219ENST00000485069 ACIN1Q9UKV3 1341 aaKnown RBP33.08■■■□□ 2.89
SPEG-219ENST00000485069 CLSPNQ9HAW4 1339 aa32.96■■■□□ 2.87
SPEG-219ENST00000485069 RRBP1Q9P2E9 1410 aaKnown RBP32.95■■■□□ 2.87
SPEG-219ENST00000485069 ARHGAP35Q9NRY4 1499 aa32.95■■■□□ 2.86
SPEG-219ENST00000485069 NEUROD1Q13562 356 aa32.92■■■□□ 2.86
SPEG-219ENST00000485069 CADPSQ9ULU8 1353 aa32.91■■■□□ 2.86
SPEG-219ENST00000485069 RANGAP1P46060 587 aaPredicted RBP32.91■■■□□ 2.86
SPEG-219ENST00000485069 CENPBP07199 599 aaPredicted RBP32.9■■■□□ 2.86
SPEG-219ENST00000485069 PELP1Q8IZL8 1130 aaKnown RBP32.87■■■□□ 2.85
SPEG-219ENST00000485069 CUX2O14529 1486 aa32.86■■■□□ 2.85
SPEG-219ENST00000485069 IGF1RP08069 1367 aa32.83■■■□□ 2.85
SPEG-219ENST00000485069 KANK4Q5T7N3 995 aaPredicted RBP32.82■■■□□ 2.84
SPEG-219ENST00000485069 MAP3K1Q13233 1512 aa32.81■■■□□ 2.84
SPEG-219ENST00000485069 DHX57Q6P158 1386 aaKnown RBP32.79■■■□□ 2.84
SPEG-219ENST00000485069 FGD5Q6ZNL6 1462 aa32.77■■■□□ 2.84
SPEG-219ENST00000485069 CC2D2AQ9P2K1 1620 aa32.69■■■□□ 2.82
SPEG-219ENST00000485069 TIAM1Q13009 1591 aa32.68■■■□□ 2.82
SPEG-219ENST00000485069 CCNB3Q8WWL7 1395 aa32.67■■■□□ 2.82
SPEG-219ENST00000485069 CARMIL1Q5VZK9 1371 aa32.66■■■□□ 2.82
SPEG-219ENST00000485069 DNMBPQ6XZF7 1577 aa32.58■■■□□ 2.81
SPEG-219ENST00000485069 FANCD2Q9BXW9 1451 aa32.58■■■□□ 2.81
SPEG-219ENST00000485069 GTF3C3Q9Y5Q9 886 aa32.55■■■□□ 2.8
SPEG-219ENST00000485069 CFAP43Q8NDM7 1665 aa32.54■■■□□ 2.8
SPEG-219ENST00000485069 ABCA10Q8WWZ4 1543 aa32.52■■■□□ 2.8
SPEG-219ENST00000485069 MIER1Q8N108 512 aa32.51■■■□□ 2.8
SPEG-219ENST00000485069 FHAD1B1AJZ9 1412 aa32.5■■■□□ 2.79
SPEG-219ENST00000485069 LRRC9Q6ZRR7 1453 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms