RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 NISCHQ9Y2I1 1504 aa19.24■□□□□ 0.67
USP16-206ENST00000485067 CHIC1Q5VXU3 224 aa18.34■□□□□ 0.53
USP16-206ENST00000485067 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
USP16-206ENST00000485067 CCDC180Q9P1Z9 1646 aa16.51■□□□□ 0.23
USP16-206ENST00000485067 MYT1Q01538 1121 aa16.37■□□□□ 0.21
USP16-206ENST00000485067 PELP1Q8IZL8 1130 aaKnown RBP16.35■□□□□ 0.21
USP16-206ENST00000485067 SHROOM4Q9ULL8 1493 aa16.26■□□□□ 0.19
USP16-206ENST00000485067 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.19
USP16-206ENST00000485067 SLC24A1O60721 1099 aa16.21■□□□□ 0.19
USP16-206ENST00000485067 PHF23Q9BUL5 403 aaPredicted RBP16.21■□□□□ 0.19
USP16-206ENST00000485067 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
USP16-206ENST00000485067 EHMT2Q96KQ7 1210 aa16.02■□□□□ 0.15
USP16-206ENST00000485067 TTBK1Q5TCY1 1321 aaPredicted RBP16.01■□□□□ 0.15
USP16-206ENST00000485067 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
USP16-206ENST00000485067 SUPT5HO00267 1087 aaKnown RBP15.75■□□□□ 0.11
USP16-206ENST00000485067 ABCC9O60706 1549 aa15.62■□□□□ 0.09
USP16-206ENST00000485067 PRKCSHP14314 528 aaPredicted RBP15.58■□□□□ 0.08
USP16-206ENST00000485067 MYO15BQ96JP2 1530 aa15.5■□□□□ 0.07
USP16-206ENST00000485067 SCRIBQ14160 1630 aa15.47■□□□□ 0.07
USP16-206ENST00000485067 APLP2Q06481 763 aa15.42■□□□□ 0.06
USP16-206ENST00000485067 PLPPR3Q6T4P5 718 aa15.42■□□□□ 0.06
USP16-206ENST00000485067 ERICH6Q7L0X2 663 aa15.4■□□□□ 0.06
USP16-206ENST00000485067 NACADO15069 1562 aa15.29■□□□□ 0.04
USP16-206ENST00000485067 DAXXQ9UER7 740 aaPredicted RBP15.26■□□□□ 0.03
USP16-206ENST00000485067 SENP3Q9H4L4 574 aaPredicted RBP15.16■□□□□ 0.02
USP16-206ENST00000485067 RSF1Q96T23 1441 aaPredicted RBP15.12■□□□□ 0.01
USP16-206ENST00000485067 RB1CC1Q8TDY2 1594 aa15.12■□□□□ 0.01
USP16-206ENST00000485067 CECR2Q9BXF3 1484 aa15.11■□□□□ 0.01
USP16-206ENST00000485067 RTN4Q9NQC3 1192 aaKnown RBP15.1■□□□□ 0.01
USP16-206ENST00000485067 KCNA4P22459 653 aa15.06■□□□□ 0
USP16-206ENST00000485067 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
USP16-206ENST00000485067 UNC13AQ9UPW8 1703 aa15□□□□□ -0.01
USP16-206ENST00000485067 MROH2BQ7Z745 1585 aa14.99□□□□□ -0.01
USP16-206ENST00000485067 WIZO95785 1651 aa14.91□□□□□ -0.02
USP16-206ENST00000485067 PABPN1Q86U42 306 aaKnown RBP eCLIP14.89□□□□□ -0.03
USP16-206ENST00000485067 BICRAQ9NZM4 1560 aa14.81□□□□□ -0.04
USP16-206ENST00000485067 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.04
USP16-206ENST00000485067 LOC105371045A0A1W2PR82 267 aa14.74□□□□□ -0.05
USP16-206ENST00000485067 SMARCA4P51532 1647 aa14.74□□□□□ -0.05
USP16-206ENST00000485067 BCL11AQ9H165 835 aa14.68□□□□□ -0.06
USP16-206ENST00000485067 TRIM41Q8WV44 630 aa14.66□□□□□ -0.06
USP16-206ENST00000485067 TOP2AP11388 1531 aaKnown RBP14.61□□□□□ -0.07
USP16-206ENST00000485067 FAM9AQ8IZU1 332 aaPredicted RBP14.59□□□□□ -0.07
USP16-206ENST00000485067 CCDC88BA6NC98 1476 aa14.57□□□□□ -0.08
USP16-206ENST00000485067 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
USP16-206ENST00000485067 SMARCA2P51531 1590 aa14.55□□□□□ -0.08
USP16-206ENST00000485067 AMER1Q5JTC6 1135 aaPredicted RBP14.52□□□□□ -0.08
USP16-206ENST00000485067 HRCP23327 699 aa14.5□□□□□ -0.09
USP16-206ENST00000485067 EIF5BO60841 1220 aaKnown RBP14.5□□□□□ -0.09
USP16-206ENST00000485067 PCGF6Q9BYE7 350 aa14.5□□□□□ -0.09
USP16-206ENST00000485067 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
USP16-206ENST00000485067 PEG3Q9GZU2 1588 aa14.44□□□□□ -0.1
USP16-206ENST00000485067 ATAD2BQ9ULI0 1458 aa14.43□□□□□ -0.1
USP16-206ENST00000485067 ADRA2BP18089 450 aa14.41□□□□□ -0.1
USP16-206ENST00000485067 TRIM26Q12899 539 aaPredicted RBP14.4□□□□□ -0.1
USP16-206ENST00000485067 NCBP3Q53F19 620 aaKnown RBP14.38□□□□□ -0.11
USP16-206ENST00000485067 BAZ1BQ9UIG0 1483 aaKnown RBP14.35□□□□□ -0.11
USP16-206ENST00000485067 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
USP16-206ENST00000485067 SOGA1O94964 1423 aa14.26□□□□□ -0.13
USP16-206ENST00000485067 EEA1Q15075 1411 aa14.24□□□□□ -0.13
USP16-206ENST00000485067 RUSC2Q8N2Y8 1516 aa14.24□□□□□ -0.13
USP16-206ENST00000485067 SYNJ1O43426 1573 aa14.2□□□□□ -0.14
USP16-206ENST00000485067 WRNQ14191 1432 aaPredicted RBP eCLIP14.19□□□□□ -0.14
USP16-206ENST00000485067 NCAPD3P42695 1498 aa14.17□□□□□ -0.14
USP16-206ENST00000485067 HMGXB3Q12766 1538 aa14.14□□□□□ -0.15
USP16-206ENST00000485067 PPARGC1BQ86YN6 1023 aaKnown RBP14.13□□□□□ -0.15
USP16-206ENST00000485067 ZEB1P37275 1124 aaPredicted RBP14.12□□□□□ -0.15
USP16-206ENST00000485067 TNIKQ9UKE5 1360 aa14.1□□□□□ -0.15
USP16-206ENST00000485067 SCAF1Q9H7N4 1312 aaKnown RBP14.08□□□□□ -0.16
USP16-206ENST00000485067 ZBTB22O15209 634 aa14.07□□□□□ -0.16
USP16-206ENST00000485067 ARXQ96QS3 562 aa14.06□□□□□ -0.16
USP16-206ENST00000485067 GOLGA3Q08378 1498 aa14.05□□□□□ -0.16
USP16-206ENST00000485067 CEP162Q5TB80 1403 aa14.05□□□□□ -0.16
USP16-206ENST00000485067 PLEKHG5O94827 1062 aa14.05□□□□□ -0.16
USP16-206ENST00000485067 CC2D2AQ9P2K1 1620 aa14.05□□□□□ -0.16
USP16-206ENST00000485067 PPP6R1Q9UPN7 881 aa14.03□□□□□ -0.16
USP16-206ENST00000485067 KIF21BO75037 1637 aa14.03□□□□□ -0.16
USP16-206ENST00000485067 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
USP16-206ENST00000485067 TOP2BQ02880 1626 aa14□□□□□ -0.17
USP16-206ENST00000485067 UBTFP17480 764 aaKnown RBP13.99□□□□□ -0.17
USP16-206ENST00000485067 BIVM-ERCC5R4GMW8 1640 aa13.99□□□□□ -0.17
USP16-206ENST00000485067 CFTRP13569 1480 aa13.99□□□□□ -0.17
USP16-206ENST00000485067 CUX1P39880 1505 aa13.97□□□□□ -0.17
USP16-206ENST00000485067 FOXD1Q16676 465 aa13.97□□□□□ -0.17
USP16-206ENST00000485067 RANGAP1P46060 587 aaPredicted RBP13.95□□□□□ -0.18
USP16-206ENST00000485067 CENPBP07199 599 aaPredicted RBP13.91□□□□□ -0.18
USP16-206ENST00000485067 DNAJC5BQ9UF47 199 aa13.91□□□□□ -0.18
USP16-206ENST00000485067 RAPGEF2Q9Y4G8 1499 aa13.91□□□□□ -0.18
USP16-206ENST00000485067 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
USP16-206ENST00000485067 CADPSQ9ULU8 1353 aa13.88□□□□□ -0.19
USP16-206ENST00000485067 NESP48681 1621 aa13.85□□□□□ -0.19
USP16-206ENST00000485067 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
USP16-206ENST00000485067 CLIP1P30622 1438 aa13.83□□□□□ -0.2
USP16-206ENST00000485067 UBE2Q2Q8WVN8 375 aa13.83□□□□□ -0.2
USP16-206ENST00000485067 PODXL2Q9NZ53 605 aa13.83□□□□□ -0.2
USP16-206ENST00000485067 KLHL34Q8N239 644 aa13.8□□□□□ -0.2
USP16-206ENST00000485067 VPS8Q8N3P4 1428 aa13.79□□□□□ -0.2
USP16-206ENST00000485067 TIMELESSQ9UNS1 1208 aa13.79□□□□□ -0.2
USP16-206ENST00000485067 PRXQ9BXM0 1461 aa13.78□□□□□ -0.2
USP16-206ENST00000485067 FANCD2Q9BXW9 1451 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms