RNA–Protein interactions for RNA: ENST00000484061.5

TTC7A-209, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 3,085 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-209ENST00000484061 NISCHQ9Y2I1 1504 aa30.66■■■□□ 2.5
TTC7A-209ENST00000484061 CCDC180Q9P1Z9 1646 aa26.14■■□□□ 1.78
TTC7A-209ENST00000484061 SHROOM4Q9ULL8 1493 aa26.01■■□□□ 1.75
TTC7A-209ENST00000484061 ZCCHC6Q5VYS8 1495 aaKnown RBP25.96■■□□□ 1.75
TTC7A-209ENST00000484061 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
TTC7A-209ENST00000484061 DCAF8L2P0C7V8 631 aa25.23■■□□□ 1.63
TTC7A-209ENST00000484061 DCAF1Q9Y4B6 1507 aa25.22■■□□□ 1.63
TTC7A-209ENST00000484061 CHIC1Q5VXU3 224 aa24.87■■□□□ 1.57
TTC7A-209ENST00000484061 MYO15BQ96JP2 1530 aa24.81■■□□□ 1.56
TTC7A-209ENST00000484061 ABCC9O60706 1549 aa24.54■■□□□ 1.52
TTC7A-209ENST00000484061 SCRIBQ14160 1630 aa24.41■■□□□ 1.5
TTC7A-209ENST00000484061 RSF1Q96T23 1441 aaPredicted RBP24.24■■□□□ 1.47
TTC7A-209ENST00000484061 HRCP23327 699 aa24.12■■□□□ 1.45
TTC7A-209ENST00000484061 NACADO15069 1562 aa24.12■■□□□ 1.45
TTC7A-209ENST00000484061 LOC105371045A0A1W2PR82 267 aa24.09■■□□□ 1.45
TTC7A-209ENST00000484061 PCGF6Q9BYE7 350 aa24.06■■□□□ 1.44
TTC7A-209ENST00000484061 RB1CC1Q8TDY2 1594 aa24.02■■□□□ 1.44
TTC7A-209ENST00000484061 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
TTC7A-209ENST00000484061 MROH2BQ7Z745 1585 aa23.82■■□□□ 1.4
TTC7A-209ENST00000484061 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
TTC7A-209ENST00000484061 WIZO95785 1651 aa23.72■■□□□ 1.39
TTC7A-209ENST00000484061 TRIM26Q12899 539 aaPredicted RBP23.65■■□□□ 1.38
TTC7A-209ENST00000484061 BAZ1AQ9NRL2 1556 aaPredicted RBP23.6■■□□□ 1.37
TTC7A-209ENST00000484061 PPARGC1BQ86YN6 1023 aaKnown RBP23.57■■□□□ 1.36
TTC7A-209ENST00000484061 FAM9AQ8IZU1 332 aaPredicted RBP23.53■■□□□ 1.36
TTC7A-209ENST00000484061 EIF4G1Q04637 1599 aaKnown RBP23.46■■□□□ 1.35
TTC7A-209ENST00000484061 UNC13AQ9UPW8 1703 aa23.43■■□□□ 1.34
TTC7A-209ENST00000484061 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
TTC7A-209ENST00000484061 PABPN1Q86U42 306 aaKnown RBP eCLIP23.37■■□□□ 1.33
TTC7A-209ENST00000484061 TOP2AP11388 1531 aaKnown RBP23.36■■□□□ 1.33
TTC7A-209ENST00000484061 EHMT2Q96KQ7 1210 aa23.29■■□□□ 1.32
TTC7A-209ENST00000484061 SMARCA2P51531 1590 aa23.23■■□□□ 1.31
TTC7A-209ENST00000484061 CCDC88BA6NC98 1476 aa23.22■■□□□ 1.31
TTC7A-209ENST00000484061 ABCC8Q09428 1581 aa23.16■■□□□ 1.3
TTC7A-209ENST00000484061 ZEB1P37275 1124 aaPredicted RBP23.15■■□□□ 1.3
TTC7A-209ENST00000484061 BICRAQ9NZM4 1560 aa23.08■■□□□ 1.29
TTC7A-209ENST00000484061 PEG3Q9GZU2 1588 aa22.96■■□□□ 1.27
TTC7A-209ENST00000484061 SOGA1O94964 1423 aa22.92■■□□□ 1.26
TTC7A-209ENST00000484061 WRNQ14191 1432 aaPredicted RBP eCLIP22.86■■□□□ 1.25
TTC7A-209ENST00000484061 EEA1Q15075 1411 aa22.86■■□□□ 1.25
TTC7A-209ENST00000484061 CEP162Q5TB80 1403 aa22.83■■□□□ 1.25
TTC7A-209ENST00000484061 RUSC2Q8N2Y8 1516 aa22.81■■□□□ 1.24
TTC7A-209ENST00000484061 TNIKQ9UKE5 1360 aa22.81■■□□□ 1.24
TTC7A-209ENST00000484061 CSRNP3Q8WYN3 585 aa22.77■■□□□ 1.24
TTC7A-209ENST00000484061 ATAD2BQ9ULI0 1458 aa22.73■■□□□ 1.23
TTC7A-209ENST00000484061 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
TTC7A-209ENST00000484061 GOLGA3Q08378 1498 aa22.69■■□□□ 1.22
TTC7A-209ENST00000484061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.66■■□□□ 1.22
TTC7A-209ENST00000484061 BAZ1BQ9UIG0 1483 aaKnown RBP22.66■■□□□ 1.22
TTC7A-209ENST00000484061 UBTFP17480 764 aaKnown RBP22.63■■□□□ 1.21
TTC7A-209ENST00000484061 CCER1Q8TC90 406 aaPredicted RBP22.6■■□□□ 1.21
TTC7A-209ENST00000484061 KIF21BO75037 1637 aa22.58■■□□□ 1.21
TTC7A-209ENST00000484061 TTBK1Q5TCY1 1321 aaPredicted RBP22.56■■□□□ 1.2
TTC7A-209ENST00000484061 CEP164Q9UPV0 1460 aa22.56■■□□□ 1.2
TTC7A-209ENST00000484061 TOP2BQ02880 1626 aa22.43■■□□□ 1.18
TTC7A-209ENST00000484061 CLIP1P30622 1438 aa22.4■■□□□ 1.18
TTC7A-209ENST00000484061 BIVM-ERCC5R4GMW8 1640 aa22.38■■□□□ 1.17
TTC7A-209ENST00000484061 RAPGEF2Q9Y4G8 1499 aa22.38■■□□□ 1.17
TTC7A-209ENST00000484061 VPS8Q8N3P4 1428 aa22.33■■□□□ 1.17
TTC7A-209ENST00000484061 HMGXB3Q12766 1538 aa22.33■■□□□ 1.16
TTC7A-209ENST00000484061 NCAPD3P42695 1498 aa22.3■■□□□ 1.16
TTC7A-209ENST00000484061 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
TTC7A-209ENST00000484061 SCAF1Q9H7N4 1312 aaKnown RBP22.21■■□□□ 1.15
TTC7A-209ENST00000484061 PRXQ9BXM0 1461 aa22.19■■□□□ 1.14
TTC7A-209ENST00000484061 CUX1P39880 1505 aa22.18■■□□□ 1.14
TTC7A-209ENST00000484061 DIEXFQ68CQ4 756 aaKnown RBP22.18■■□□□ 1.14
TTC7A-209ENST00000484061 APLP2Q06481 763 aa22.14■■□□□ 1.13
TTC7A-209ENST00000484061 HNRNPUL2Q1KMD3 747 aaKnown RBP22.13■■□□□ 1.13
TTC7A-209ENST00000484061 CFTRP13569 1480 aa22.12■■□□□ 1.13
TTC7A-209ENST00000484061 RANGAP1P46060 587 aaPredicted RBP22.12■■□□□ 1.13
TTC7A-209ENST00000484061 ARAP1Q96P48 1450 aa22.08■■□□□ 1.12
TTC7A-209ENST00000484061 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
TTC7A-209ENST00000484061 PRDM2Q13029 1718 aa22.05■■□□□ 1.12
TTC7A-209ENST00000484061 ZNF316A6NFI3 1004 aaPredicted RBP22.04■■□□□ 1.12
TTC7A-209ENST00000484061 ACIN1Q9UKV3 1341 aaKnown RBP22.02■■□□□ 1.11
TTC7A-209ENST00000484061 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
TTC7A-209ENST00000484061 CC2D2AQ9P2K1 1620 aa21.96■■□□□ 1.11
TTC7A-209ENST00000484061 KANK4Q5T7N3 995 aaPredicted RBP21.89■■□□□ 1.1
TTC7A-209ENST00000484061 DNAJC5BQ9UF47 199 aa21.89■■□□□ 1.09
TTC7A-209ENST00000484061 ARHGAP35Q9NRY4 1499 aa21.88■■□□□ 1.09
TTC7A-209ENST00000484061 CENPBP07199 599 aaPredicted RBP21.88■■□□□ 1.09
TTC7A-209ENST00000484061 CADPSQ9ULU8 1353 aa21.84■■□□□ 1.09
TTC7A-209ENST00000484061 CUX2O14529 1486 aa21.83■■□□□ 1.09
TTC7A-209ENST00000484061 RRBP1Q9P2E9 1410 aaKnown RBP21.83■■□□□ 1.09
TTC7A-209ENST00000484061 IGF1RP08069 1367 aa21.81■■□□□ 1.08
TTC7A-209ENST00000484061 DHX57Q6P158 1386 aaKnown RBP21.79■■□□□ 1.08
TTC7A-209ENST00000484061 CLSPNQ9HAW4 1339 aa21.79■■□□□ 1.08
TTC7A-209ENST00000484061 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
TTC7A-209ENST00000484061 PELP1Q8IZL8 1130 aaKnown RBP21.75■■□□□ 1.07
TTC7A-209ENST00000484061 GTF3C3Q9Y5Q9 886 aa21.74■■□□□ 1.07
TTC7A-209ENST00000484061 CARMIL1Q5VZK9 1371 aa21.71■■□□□ 1.07
TTC7A-209ENST00000484061 MIER1Q8N108 512 aa21.7■■□□□ 1.06
TTC7A-209ENST00000484061 CCNB3Q8WWL7 1395 aa21.7■■□□□ 1.06
TTC7A-209ENST00000484061 TIAM1Q13009 1591 aa21.67■■□□□ 1.06
TTC7A-209ENST00000484061 MAP3K1Q13233 1512 aa21.67■■□□□ 1.06
TTC7A-209ENST00000484061 FANCD2Q9BXW9 1451 aa21.64■■□□□ 1.05
TTC7A-209ENST00000484061 YTHDC1Q96MU7 727 aaKnown RBP21.6■■□□□ 1.05
TTC7A-209ENST00000484061 DNMBPQ6XZF7 1577 aa21.59■■□□□ 1.05
TTC7A-209ENST00000484061 LRRC9Q6ZRR7 1453 aa21.56■■□□□ 1.04
TTC7A-209ENST00000484061 CFAP43Q8NDM7 1665 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms