RNA–Protein interactions for RNA: ENST00000483658.1

KALRN-216, Transcript of kalirin RhoGEF kinase, humanhuman

TSL 1 (best)

Gene KALRN, Length 2,620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KALRN-216ENST00000483658 NISCHQ9Y2I1 1504 aa28.41■■■□□ 2.14
KALRN-216ENST00000483658 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
KALRN-216ENST00000483658 CCDC180Q9P1Z9 1646 aa24.09■■□□□ 1.45
KALRN-216ENST00000483658 ZCCHC6Q5VYS8 1495 aaKnown RBP24.05■■□□□ 1.44
KALRN-216ENST00000483658 SUPT5HO00267 1087 aaKnown RBP23.94■■□□□ 1.42
KALRN-216ENST00000483658 DCAF8L2P0C7V8 631 aa23.63■■□□□ 1.37
KALRN-216ENST00000483658 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
KALRN-216ENST00000483658 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
KALRN-216ENST00000483658 MYO15BQ96JP2 1530 aa23.22■■□□□ 1.31
KALRN-216ENST00000483658 HRCP23327 699 aa22.72■■□□□ 1.23
KALRN-216ENST00000483658 ABCC9O60706 1549 aa22.72■■□□□ 1.23
KALRN-216ENST00000483658 PCGF6Q9BYE7 350 aa22.68■■□□□ 1.22
KALRN-216ENST00000483658 SCRIBQ14160 1630 aa22.66■■□□□ 1.22
KALRN-216ENST00000483658 LOC105371045A0A1W2PR82 267 aa22.62■■□□□ 1.21
KALRN-216ENST00000483658 RSF1Q96T23 1441 aaPredicted RBP22.53■■□□□ 1.2
KALRN-216ENST00000483658 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.16
KALRN-216ENST00000483658 TRIM41Q8WV44 630 aa22.27■■□□□ 1.16
KALRN-216ENST00000483658 NACADO15069 1562 aa22.27■■□□□ 1.16
KALRN-216ENST00000483658 PPARGC1BQ86YN6 1023 aaKnown RBP22.27■■□□□ 1.15
KALRN-216ENST00000483658 TRIM26Q12899 539 aaPredicted RBP22.2■■□□□ 1.14
KALRN-216ENST00000483658 CECR2Q9BXF3 1484 aa22.19■■□□□ 1.14
KALRN-216ENST00000483658 FAM9AQ8IZU1 332 aaPredicted RBP22.13■■□□□ 1.13
KALRN-216ENST00000483658 MROH2BQ7Z745 1585 aa22.11■■□□□ 1.13
KALRN-216ENST00000483658 WIZO95785 1651 aa22■■□□□ 1.11
KALRN-216ENST00000483658 EHMT2Q96KQ7 1210 aa21.97■■□□□ 1.11
KALRN-216ENST00000483658 BAZ1AQ9NRL2 1556 aaPredicted RBP21.86■■□□□ 1.09
KALRN-216ENST00000483658 ZEB1P37275 1124 aaPredicted RBP21.75■■□□□ 1.07
KALRN-216ENST00000483658 EIF4G1Q04637 1599 aaKnown RBP21.72■■□□□ 1.07
KALRN-216ENST00000483658 TOP2AP11388 1531 aaKnown RBP21.65■■□□□ 1.06
KALRN-216ENST00000483658 SMARCA4P51532 1647 aa21.63■■□□□ 1.05
KALRN-216ENST00000483658 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
KALRN-216ENST00000483658 ABCC8Q09428 1581 aa21.56■■□□□ 1.04
KALRN-216ENST00000483658 UNC13AQ9UPW8 1703 aa21.55■■□□□ 1.04
KALRN-216ENST00000483658 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
KALRN-216ENST00000483658 PABPN1Q86U42 306 aaKnown RBP eCLIP21.39■■□□□ 1.01
KALRN-216ENST00000483658 SOGA1O94964 1423 aa21.37■■□□□ 1.01
KALRN-216ENST00000483658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.33■■□□□ 1
KALRN-216ENST00000483658 CEP162Q5TB80 1403 aa21.32■■□□□ 1
KALRN-216ENST00000483658 BICRAQ9NZM4 1560 aa21.3■■□□□ 1
KALRN-216ENST00000483658 TTBK1Q5TCY1 1321 aaPredicted RBP21.29■■□□□ 1
KALRN-216ENST00000483658 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
KALRN-216ENST00000483658 CCER1Q8TC90 406 aaPredicted RBP21.28■■□□□ 1
KALRN-216ENST00000483658 TNIKQ9UKE5 1360 aa21.26■□□□□ 0.99
KALRN-216ENST00000483658 RUSC2Q8N2Y8 1516 aa21.26■□□□□ 0.99
KALRN-216ENST00000483658 CSRNP3Q8WYN3 585 aa21.26■□□□□ 0.99
KALRN-216ENST00000483658 EEA1Q15075 1411 aa21.25■□□□□ 0.99
KALRN-216ENST00000483658 UBTFP17480 764 aaKnown RBP21.22■□□□□ 0.99
KALRN-216ENST00000483658 PEG3Q9GZU2 1588 aa21.17■□□□□ 0.98
KALRN-216ENST00000483658 GOLGA3Q08378 1498 aa21.14■□□□□ 0.97
KALRN-216ENST00000483658 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
KALRN-216ENST00000483658 ATAD2BQ9ULI0 1458 aa21.06■□□□□ 0.96
KALRN-216ENST00000483658 BAZ1BQ9UIG0 1483 aaKnown RBP21.02■□□□□ 0.96
KALRN-216ENST00000483658 CEP164Q9UPV0 1460 aa21■□□□□ 0.95
KALRN-216ENST00000483658 SCAF1Q9H7N4 1312 aaKnown RBP20.99■□□□□ 0.95
KALRN-216ENST00000483658 KIF21BO75037 1637 aa20.96■□□□□ 0.95
KALRN-216ENST00000483658 CLIP1P30622 1438 aa20.91■□□□□ 0.94
KALRN-216ENST00000483658 DIEXFQ68CQ4 756 aaKnown RBP20.9■□□□□ 0.94
KALRN-216ENST00000483658 RAPGEF2Q9Y4G8 1499 aa20.85■□□□□ 0.93
KALRN-216ENST00000483658 RANGAP1P46060 587 aaPredicted RBP20.82■□□□□ 0.92
KALRN-216ENST00000483658 VPS8Q8N3P4 1428 aa20.82■□□□□ 0.92
KALRN-216ENST00000483658 HNRNPUL2Q1KMD3 747 aaKnown RBP20.81■□□□□ 0.92
KALRN-216ENST00000483658 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
KALRN-216ENST00000483658 APLP2Q06481 763 aa20.77■□□□□ 0.92
KALRN-216ENST00000483658 ACIN1Q9UKV3 1341 aaKnown RBP20.77■□□□□ 0.91
KALRN-216ENST00000483658 NEUROD1Q13562 356 aa20.74■□□□□ 0.91
KALRN-216ENST00000483658 ZNF316A6NFI3 1004 aaPredicted RBP20.71■□□□□ 0.91
KALRN-216ENST00000483658 BIVM-ERCC5R4GMW8 1640 aa20.69■□□□□ 0.9
KALRN-216ENST00000483658 CENPBP07199 599 aaPredicted RBP20.65■□□□□ 0.9
KALRN-216ENST00000483658 NCAPD3P42695 1498 aa20.61■□□□□ 0.89
KALRN-216ENST00000483658 HMGXB3Q12766 1538 aa20.61■□□□□ 0.89
KALRN-216ENST00000483658 PRXQ9BXM0 1461 aa20.61■□□□□ 0.89
KALRN-216ENST00000483658 PELP1Q8IZL8 1130 aaKnown RBP20.6■□□□□ 0.89
KALRN-216ENST00000483658 ERICH3Q5RHP9 1530 aa20.6■□□□□ 0.89
KALRN-216ENST00000483658 CUX1P39880 1505 aa20.58■□□□□ 0.89
KALRN-216ENST00000483658 ARAP1Q96P48 1450 aa20.55■□□□□ 0.88
KALRN-216ENST00000483658 GTF3C3Q9Y5Q9 886 aa20.54■□□□□ 0.88
KALRN-216ENST00000483658 KIF27Q86VH2 1401 aa20.52■□□□□ 0.87
KALRN-216ENST00000483658 CFTRP13569 1480 aa20.48■□□□□ 0.87
KALRN-216ENST00000483658 KANK4Q5T7N3 995 aaPredicted RBP20.47■□□□□ 0.87
KALRN-216ENST00000483658 YTHDC1Q96MU7 727 aaKnown RBP20.45■□□□□ 0.86
KALRN-216ENST00000483658 MIER1Q8N108 512 aa20.43■□□□□ 0.86
KALRN-216ENST00000483658 DHX57Q6P158 1386 aaKnown RBP20.38■□□□□ 0.85
KALRN-216ENST00000483658 ARHGAP35Q9NRY4 1499 aa20.36■□□□□ 0.85
KALRN-216ENST00000483658 CLSPNQ9HAW4 1339 aa20.34■□□□□ 0.85
KALRN-216ENST00000483658 RRBP1Q9P2E9 1410 aaKnown RBP20.33■□□□□ 0.85
KALRN-216ENST00000483658 CUX2O14529 1486 aa20.32■□□□□ 0.84
KALRN-216ENST00000483658 PRDM2Q13029 1718 aa20.28■□□□□ 0.84
KALRN-216ENST00000483658 IGF1RP08069 1367 aa20.28■□□□□ 0.84
KALRN-216ENST00000483658 CCNB3Q8WWL7 1395 aa20.27■□□□□ 0.84
KALRN-216ENST00000483658 CADPSQ9ULU8 1353 aa20.25■□□□□ 0.83
KALRN-216ENST00000483658 ITGAEP38570 1179 aa20.25■□□□□ 0.83
KALRN-216ENST00000483658 FGD5Q6ZNL6 1462 aa20.21■□□□□ 0.83
KALRN-216ENST00000483658 CARMIL1Q5VZK9 1371 aa20.2■□□□□ 0.82
KALRN-216ENST00000483658 TIAM1Q13009 1591 aa20.15■□□□□ 0.82
KALRN-216ENST00000483658 MAP3K1Q13233 1512 aa20.1■□□□□ 0.81
KALRN-216ENST00000483658 RAB3GAP2Q9H2M9 1393 aa20.1■□□□□ 0.81
KALRN-216ENST00000483658 CC2D2AQ9P2K1 1620 aa20.08■□□□□ 0.81
KALRN-216ENST00000483658 LRRC9Q6ZRR7 1453 aa20.08■□□□□ 0.8
KALRN-216ENST00000483658 P3H3Q8IVL6 736 aa20.07■□□□□ 0.8
KALRN-216ENST00000483658 FANCD2Q9BXW9 1451 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms