RNA–Protein interactions for RNA: ENST00000482964.1

ATP13A4-209, Transcript of ATPase 13A4, humanhuman

TSL 3

Gene ATP13A4, Length 872 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4-209ENST00000482964 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
ATP13A4-209ENST00000482964 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
ATP13A4-209ENST00000482964 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
ATP13A4-209ENST00000482964 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
ATP13A4-209ENST00000482964 SENP3Q9H4L4 574 aaPredicted RBP16.34■□□□□ 0.21
ATP13A4-209ENST00000482964 PLPPR3Q6T4P5 718 aa15.57■□□□□ 0.08
ATP13A4-209ENST00000482964 CCDC180Q9P1Z9 1646 aa15.35■□□□□ 0.05
ATP13A4-209ENST00000482964 FOXD1Q16676 465 aa15.29■□□□□ 0.04
ATP13A4-209ENST00000482964 ZCCHC6Q5VYS8 1495 aaKnown RBP14.9□□□□□ -0.02
ATP13A4-209ENST00000482964 DCAF1Q9Y4B6 1507 aa14.71□□□□□ -0.05
ATP13A4-209ENST00000482964 MYO15BQ96JP2 1530 aa14.43□□□□□ -0.1
ATP13A4-209ENST00000482964 ADRA2BP18089 450 aa14.42□□□□□ -0.1
ATP13A4-209ENST00000482964 PPP6R1Q9UPN7 881 aa14.37□□□□□ -0.11
ATP13A4-209ENST00000482964 PIAS4Q8N2W9 510 aaPredicted RBP14.26□□□□□ -0.13
ATP13A4-209ENST00000482964 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
ATP13A4-209ENST00000482964 MSH5O43196 834 aa14.21□□□□□ -0.13
ATP13A4-209ENST00000482964 KCNA4P22459 653 aa14.11□□□□□ -0.15
ATP13A4-209ENST00000482964 NACADO15069 1562 aa14.1□□□□□ -0.15
ATP13A4-209ENST00000482964 ABCC9O60706 1549 aa14.06□□□□□ -0.16
ATP13A4-209ENST00000482964 SCRIBQ14160 1630 aa13.89□□□□□ -0.19
ATP13A4-209ENST00000482964 DCAF8L2P0C7V8 631 aa13.88□□□□□ -0.19
ATP13A4-209ENST00000482964 EHMT2Q96KQ7 1210 aa13.86□□□□□ -0.19
ATP13A4-209ENST00000482964 RB1CC1Q8TDY2 1594 aa13.85□□□□□ -0.19
ATP13A4-209ENST00000482964 SUPT5HO00267 1087 aaKnown RBP13.83□□□□□ -0.2
ATP13A4-209ENST00000482964 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
ATP13A4-209ENST00000482964 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
ATP13A4-209ENST00000482964 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
ATP13A4-209ENST00000482964 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
ATP13A4-209ENST00000482964 UNC13AQ9UPW8 1703 aa13.61□□□□□ -0.23
ATP13A4-209ENST00000482964 SLC4A1APQ9BWU0 796 aaKnown RBP13.61□□□□□ -0.23
ATP13A4-209ENST00000482964 BAZ1AQ9NRL2 1556 aaPredicted RBP13.58□□□□□ -0.23
ATP13A4-209ENST00000482964 MROH2BQ7Z745 1585 aa13.51□□□□□ -0.25
ATP13A4-209ENST00000482964 CSRNP3Q8WYN3 585 aa13.48□□□□□ -0.25
ATP13A4-209ENST00000482964 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
ATP13A4-209ENST00000482964 SMARCA4P51532 1647 aa13.46□□□□□ -0.25
ATP13A4-209ENST00000482964 EIF4G1Q04637 1599 aaKnown RBP13.43□□□□□ -0.26
ATP13A4-209ENST00000482964 WIZO95785 1651 aa13.43□□□□□ -0.26
ATP13A4-209ENST00000482964 TOP2AP11388 1531 aaKnown RBP13.42□□□□□ -0.26
ATP13A4-209ENST00000482964 BICRAQ9NZM4 1560 aa13.41□□□□□ -0.26
ATP13A4-209ENST00000482964 PEG3Q9GZU2 1588 aa13.4□□□□□ -0.26
ATP13A4-209ENST00000482964 NPM3O75607 178 aaKnown RBP13.36□□□□□ -0.27
ATP13A4-209ENST00000482964 SCAF1Q9H7N4 1312 aaKnown RBP13.3□□□□□ -0.28
ATP13A4-209ENST00000482964 CNKSR2Q8WXI2 1034 aa13.28□□□□□ -0.28
ATP13A4-209ENST00000482964 SMARCA2P51531 1590 aa13.27□□□□□ -0.29
ATP13A4-209ENST00000482964 MAPK8IP2Q13387 824 aaPredicted RBP13.14□□□□□ -0.31
ATP13A4-209ENST00000482964 CCDC88BA6NC98 1476 aa13.14□□□□□ -0.31
ATP13A4-209ENST00000482964 TRIM41Q8WV44 630 aa13.09□□□□□ -0.31
ATP13A4-209ENST00000482964 ATAD2BQ9ULI0 1458 aa13.07□□□□□ -0.32
ATP13A4-209ENST00000482964 HMGXB3Q12766 1538 aa13.07□□□□□ -0.32
ATP13A4-209ENST00000482964 DNAJC5BQ9UF47 199 aa13.06□□□□□ -0.32
ATP13A4-209ENST00000482964 EEA1Q15075 1411 aa13.04□□□□□ -0.32
ATP13A4-209ENST00000482964 BAZ1BQ9UIG0 1483 aaKnown RBP13.02□□□□□ -0.33
ATP13A4-209ENST00000482964 DMRT2Q9Y5R5 561 aa13□□□□□ -0.33
ATP13A4-209ENST00000482964 ZBTB22O15209 634 aa12.97□□□□□ -0.33
ATP13A4-209ENST00000482964 ABCC8Q09428 1581 aa12.95□□□□□ -0.34
ATP13A4-209ENST00000482964 NCAPD3P42695 1498 aa12.95□□□□□ -0.34
ATP13A4-209ENST00000482964 PRDM2Q13029 1718 aa12.91□□□□□ -0.34
ATP13A4-209ENST00000482964 LOC105371045A0A1W2PR82 267 aa12.91□□□□□ -0.34
ATP13A4-209ENST00000482964 PABPN1Q86U42 306 aaKnown RBP eCLIP12.91□□□□□ -0.34
ATP13A4-209ENST00000482964 BIVM-ERCC5R4GMW8 1640 aa12.89□□□□□ -0.35
ATP13A4-209ENST00000482964 WRNQ14191 1432 aaPredicted RBP eCLIP12.88□□□□□ -0.35
ATP13A4-209ENST00000482964 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
ATP13A4-209ENST00000482964 KIF21BO75037 1637 aa12.87□□□□□ -0.35
ATP13A4-209ENST00000482964 RNF216Q9NWF9 866 aaPredicted RBP12.86□□□□□ -0.35
ATP13A4-209ENST00000482964 SYNJ1O43426 1573 aa12.86□□□□□ -0.35
ATP13A4-209ENST00000482964 TOP2BQ02880 1626 aa12.85□□□□□ -0.35
ATP13A4-209ENST00000482964 HRCP23327 699 aa12.84□□□□□ -0.35
ATP13A4-209ENST00000482964 TRIM26Q12899 539 aaPredicted RBP12.81□□□□□ -0.36
ATP13A4-209ENST00000482964 TNIKQ9UKE5 1360 aa12.79□□□□□ -0.36
ATP13A4-209ENST00000482964 GOLGA3Q08378 1498 aa12.78□□□□□ -0.36
ATP13A4-209ENST00000482964 CEP164Q9UPV0 1460 aa12.77□□□□□ -0.37
ATP13A4-209ENST00000482964 CFTRP13569 1480 aa12.75□□□□□ -0.37
ATP13A4-209ENST00000482964 SOGA1O94964 1423 aa12.74□□□□□ -0.37
ATP13A4-209ENST00000482964 PCGF6Q9BYE7 350 aa12.74□□□□□ -0.37
ATP13A4-209ENST00000482964 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
ATP13A4-209ENST00000482964 CEP162Q5TB80 1403 aa12.71□□□□□ -0.37
ATP13A4-209ENST00000482964 FAM9AQ8IZU1 332 aaPredicted RBP12.69□□□□□ -0.38
ATP13A4-209ENST00000482964 RUSC2Q8N2Y8 1516 aa12.65□□□□□ -0.38
ATP13A4-209ENST00000482964 CUX1P39880 1505 aa12.64□□□□□ -0.39
ATP13A4-209ENST00000482964 HOXD11P31277 338 aaPredicted RBP12.63□□□□□ -0.39
ATP13A4-209ENST00000482964 CC2D2AQ9P2K1 1620 aa12.62□□□□□ -0.39
ATP13A4-209ENST00000482964 PRXQ9BXM0 1461 aa12.6□□□□□ -0.39
ATP13A4-209ENST00000482964 ZEB1P37275 1124 aaPredicted RBP12.59□□□□□ -0.39
ATP13A4-209ENST00000482964 CADPSQ9ULU8 1353 aa12.56□□□□□ -0.4
ATP13A4-209ENST00000482964 KIF27Q86VH2 1401 aa12.54□□□□□ -0.4
ATP13A4-209ENST00000482964 VPS8Q8N3P4 1428 aa12.53□□□□□ -0.4
ATP13A4-209ENST00000482964 RAPGEF2Q9Y4G8 1499 aa12.53□□□□□ -0.4
ATP13A4-209ENST00000482964 CLIP1P30622 1438 aa12.52□□□□□ -0.41
ATP13A4-209ENST00000482964 DNMBPQ6XZF7 1577 aa12.5□□□□□ -0.41
ATP13A4-209ENST00000482964 LAMC3Q9Y6N6 1575 aa12.5□□□□□ -0.41
ATP13A4-209ENST00000482964 ATXN8OSP0DMR3 200 aa12.46□□□□□ -0.41
ATP13A4-209ENST00000482964 SLC4A2P04920 1241 aa12.45□□□□□ -0.42
ATP13A4-209ENST00000482964 WDR97A6NE52 1622 aa12.44□□□□□ -0.42
ATP13A4-209ENST00000482964 FANCD2Q9BXW9 1451 aa12.43□□□□□ -0.42
ATP13A4-209ENST00000482964 DCAF8L1A6NGE4 600 aa12.43□□□□□ -0.42
ATP13A4-209ENST00000482964 FGD5Q6ZNL6 1462 aa12.42□□□□□ -0.42
ATP13A4-209ENST00000482964 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
ATP13A4-209ENST00000482964 CUL7Q14999 1698 aa12.42□□□□□ -0.42
ATP13A4-209ENST00000482964 ABCA10Q8WWZ4 1543 aa12.41□□□□□ -0.42
ATP13A4-209ENST00000482964 ARAP1Q96P48 1450 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms