RNA–Protein interactions for RNA: ENST00000482416.5

CCDC17-206, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 2,988 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-206ENST00000482416 NISCHQ9Y2I1 1504 aa31.09■■■□□ 2.57
CCDC17-206ENST00000482416 SHROOM4Q9ULL8 1493 aa28.24■■■□□ 2.11
CCDC17-206ENST00000482416 HRCP23327 699 aa28.18■■■□□ 2.1
CCDC17-206ENST00000482416 SUPT5HO00267 1087 aaKnown RBP28.13■■■□□ 2.09
CCDC17-206ENST00000482416 PPARGC1BQ86YN6 1023 aaKnown RBP27.99■■■□□ 2.07
CCDC17-206ENST00000482416 PCGF6Q9BYE7 350 aa27.89■■■□□ 2.05
CCDC17-206ENST00000482416 MYO15BQ96JP2 1530 aa27.59■■■□□ 2.01
CCDC17-206ENST00000482416 CHIC1Q5VXU3 224 aa27.39■■□□□ 1.98
CCDC17-206ENST00000482416 LOC105371045A0A1W2PR82 267 aa27.04■■□□□ 1.92
CCDC17-206ENST00000482416 PELP1Q8IZL8 1130 aaKnown RBP26.88■■□□□ 1.89
CCDC17-206ENST00000482416 SCAF1Q9H7N4 1312 aaKnown RBP26.82■■□□□ 1.88
CCDC17-206ENST00000482416 TRIM26Q12899 539 aaPredicted RBP26.69■■□□□ 1.86
CCDC17-206ENST00000482416 DCAF8L2P0C7V8 631 aa26.68■■□□□ 1.86
CCDC17-206ENST00000482416 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
CCDC17-206ENST00000482416 ZCCHC6Q5VYS8 1495 aaKnown RBP26.4■■□□□ 1.82
CCDC17-206ENST00000482416 ZEB1P37275 1124 aaPredicted RBP26.29■■□□□ 1.8
CCDC17-206ENST00000482416 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
CCDC17-206ENST00000482416 EHMT2Q96KQ7 1210 aa26.28■■□□□ 1.8
CCDC17-206ENST00000482416 FAM9AQ8IZU1 332 aaPredicted RBP26.13■■□□□ 1.77
CCDC17-206ENST00000482416 NEUROD1Q13562 356 aa26.12■■□□□ 1.77
CCDC17-206ENST00000482416 ACIN1Q9UKV3 1341 aaKnown RBP26.04■■□□□ 1.76
CCDC17-206ENST00000482416 GTF3C3Q9Y5Q9 886 aa25.98■■□□□ 1.75
CCDC17-206ENST00000482416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.87■■□□□ 1.73
CCDC17-206ENST00000482416 TRIM41Q8WV44 630 aa25.8■■□□□ 1.72
CCDC17-206ENST00000482416 CCER1Q8TC90 406 aaPredicted RBP25.72■■□□□ 1.71
CCDC17-206ENST00000482416 MYT1Q01538 1121 aa25.68■■□□□ 1.7
CCDC17-206ENST00000482416 DIEXFQ68CQ4 756 aaKnown RBP25.67■■□□□ 1.7
CCDC17-206ENST00000482416 CENPBP07199 599 aaPredicted RBP25.65■■□□□ 1.7
CCDC17-206ENST00000482416 TTBK1Q5TCY1 1321 aaPredicted RBP25.6■■□□□ 1.69
CCDC17-206ENST00000482416 YTHDC1Q96MU7 727 aaKnown RBP25.56■■□□□ 1.68
CCDC17-206ENST00000482416 RSF1Q96T23 1441 aaPredicted RBP25.19■■□□□ 1.62
CCDC17-206ENST00000482416 RB1CC1Q8TDY2 1594 aa25.13■■□□□ 1.61
CCDC17-206ENST00000482416 MIER1Q8N108 512 aa25.09■■□□□ 1.61
CCDC17-206ENST00000482416 ZNF316A6NFI3 1004 aaPredicted RBP25.08■■□□□ 1.61
CCDC17-206ENST00000482416 ABCC9O60706 1549 aa25.07■■□□□ 1.6
CCDC17-206ENST00000482416 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
CCDC17-206ENST00000482416 HNRNPUL2Q1KMD3 747 aaKnown RBP24.77■■□□□ 1.56
CCDC17-206ENST00000482416 SUPT16HQ9Y5B9 1047 aaKnown RBP24.63■■□□□ 1.53
CCDC17-206ENST00000482416 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
CCDC17-206ENST00000482416 CEP162Q5TB80 1403 aa24.58■■□□□ 1.53
CCDC17-206ENST00000482416 UBTFP17480 764 aaKnown RBP24.57■■□□□ 1.52
CCDC17-206ENST00000482416 BCL11AQ9H165 835 aa24.54■■□□□ 1.52
CCDC17-206ENST00000482416 TSHZ2Q9NRE2 1034 aa24.53■■□□□ 1.52
CCDC17-206ENST00000482416 ANP32EQ9BTT0 268 aa24.49■■□□□ 1.51
CCDC17-206ENST00000482416 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
CCDC17-206ENST00000482416 MROH2BQ7Z745 1585 aa24.46■■□□□ 1.51
CCDC17-206ENST00000482416 BCANQ96GW7 911 aa24.43■■□□□ 1.5
CCDC17-206ENST00000482416 CSRNP3Q8WYN3 585 aa24.41■■□□□ 1.5
CCDC17-206ENST00000482416 CCDC88BA6NC98 1476 aa24.4■■□□□ 1.5
CCDC17-206ENST00000482416 SOGA1O94964 1423 aa24.39■■□□□ 1.5
CCDC17-206ENST00000482416 ABCC8Q09428 1581 aa24.38■■□□□ 1.49
CCDC17-206ENST00000482416 WIZO95785 1651 aa24.38■■□□□ 1.49
CCDC17-206ENST00000482416 RANGAP1P46060 587 aaPredicted RBP24.36■■□□□ 1.49
CCDC17-206ENST00000482416 TNIKQ9UKE5 1360 aa24.28■■□□□ 1.48
CCDC17-206ENST00000482416 RUSC2Q8N2Y8 1516 aa24.28■■□□□ 1.48
CCDC17-206ENST00000482416 KCNH8Q96L42 1107 aa24.25■■□□□ 1.47
CCDC17-206ENST00000482416 CLSPNQ9HAW4 1339 aa24.1■■□□□ 1.45
CCDC17-206ENST00000482416 FKBP8Q14318 412 aa24.09■■□□□ 1.45
CCDC17-206ENST00000482416 APLP2Q06481 763 aa24.09■■□□□ 1.45
CCDC17-206ENST00000482416 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.45
CCDC17-206ENST00000482416 ITGAEP38570 1179 aa24.02■■□□□ 1.44
CCDC17-206ENST00000482416 GOLGA3Q08378 1498 aa23.97■■□□□ 1.43
CCDC17-206ENST00000482416 BAZ1AQ9NRL2 1556 aaPredicted RBP23.96■■□□□ 1.43
CCDC17-206ENST00000482416 RBM19Q9Y4C8 960 aaKnown RBP23.96■■□□□ 1.43
CCDC17-206ENST00000482416 DHX57Q6P158 1386 aaKnown RBP23.93■■□□□ 1.42
CCDC17-206ENST00000482416 CLIP1P30622 1438 aa23.92■■□□□ 1.42
CCDC17-206ENST00000482416 TRIM52Q96A61 297 aa23.82■■□□□ 1.4
CCDC17-206ENST00000482416 DDX10Q13206 875 aaKnown RBP23.8■■□□□ 1.4
CCDC17-206ENST00000482416 EEA1Q15075 1411 aa23.8■■□□□ 1.4
CCDC17-206ENST00000482416 MSH5O43196 834 aa23.79■■□□□ 1.4
CCDC17-206ENST00000482416 VPS8Q8N3P4 1428 aa23.79■■□□□ 1.4
CCDC17-206ENST00000482416 NACADO15069 1562 aa23.79■■□□□ 1.4
CCDC17-206ENST00000482416 NEFLP07196 543 aa23.76■■□□□ 1.39
CCDC17-206ENST00000482416 HIRIP3Q9BW71 556 aaPredicted RBP23.76■■□□□ 1.39
CCDC17-206ENST00000482416 KANK4Q5T7N3 995 aaPredicted RBP23.74■■□□□ 1.39
CCDC17-206ENST00000482416 SMARCA2P51531 1590 aa23.72■■□□□ 1.39
CCDC17-206ENST00000482416 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
CCDC17-206ENST00000482416 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
CCDC17-206ENST00000482416 IRX6P78412 446 aaPredicted RBP23.65■■□□□ 1.38
CCDC17-206ENST00000482416 RAPGEF2Q9Y4G8 1499 aa23.64■■□□□ 1.37
CCDC17-206ENST00000482416 ERICH6Q7L0X2 663 aa23.58■■□□□ 1.37
CCDC17-206ENST00000482416 KIF21BO75037 1637 aa23.57■■□□□ 1.36
CCDC17-206ENST00000482416 SIN3AQ96ST3 1273 aa23.55■■□□□ 1.36
CCDC17-206ENST00000482416 SYNJ1O43426 1573 aa23.46■■□□□ 1.35
CCDC17-206ENST00000482416 SMARCA4P51532 1647 aa23.44■■□□□ 1.34
CCDC17-206ENST00000482416 PRKCSHP14314 528 aaPredicted RBP23.43■■□□□ 1.34
CCDC17-206ENST00000482416 PPP1R15AO75807 674 aaPredicted RBP23.4■■□□□ 1.34
CCDC17-206ENST00000482416 ANP32CO43423 234 aa23.4■■□□□ 1.34
CCDC17-206ENST00000482416 RAB3GAP2Q9H2M9 1393 aa23.39■■□□□ 1.33
CCDC17-206ENST00000482416 CDK11AQ9UQ88 783 aaPredicted RBP23.38■■□□□ 1.33
CCDC17-206ENST00000482416 CCNB3Q8WWL7 1395 aa23.35■■□□□ 1.33
CCDC17-206ENST00000482416 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
CCDC17-206ENST00000482416 DEKP35659 375 aaKnown RBP23.34■■□□□ 1.33
CCDC17-206ENST00000482416 BAZ1BQ9UIG0 1483 aaKnown RBP23.33■■□□□ 1.32
CCDC17-206ENST00000482416 HNRNPUQ00839 825 aaKnown RBP eCLIP23.31■■□□□ 1.32
CCDC17-206ENST00000482416 ARAP1Q96P48 1450 aa23.31■■□□□ 1.32
CCDC17-206ENST00000482416 FANCIQ9NVI1 1328 aa23.31■■□□□ 1.32
CCDC17-206ENST00000482416 PABPN1Q86U42 306 aaKnown RBP eCLIP23.31■■□□□ 1.32
CCDC17-206ENST00000482416 NBR1Q14596 966 aa23.29■■□□□ 1.32
CCDC17-206ENST00000482416 MAPKBP1O60336 1514 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms