RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-222ENST00000482096 AEBP2Q6ZN18 517 aaPredicted RBP25.02■■□□□ 1.6
UBE2F-222ENST00000482096 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
UBE2F-222ENST00000482096 NISCHQ9Y2I1 1504 aa21.65■■□□□ 1.06
UBE2F-222ENST00000482096 PHF23Q9BUL5 403 aaPredicted RBP21.61■■□□□ 1.05
UBE2F-222ENST00000482096 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
UBE2F-222ENST00000482096 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
UBE2F-222ENST00000482096 FOXD1Q16676 465 aa19.66■□□□□ 0.74
UBE2F-222ENST00000482096 ABCC9O60706 1549 aa19.56■□□□□ 0.72
UBE2F-222ENST00000482096 CCDC180Q9P1Z9 1646 aa19.41■□□□□ 0.7
UBE2F-222ENST00000482096 ADRA2BP18089 450 aa19.03■□□□□ 0.64
UBE2F-222ENST00000482096 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
UBE2F-222ENST00000482096 PIAS4Q8N2W9 510 aaPredicted RBP18.59■□□□□ 0.57
UBE2F-222ENST00000482096 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
UBE2F-222ENST00000482096 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
UBE2F-222ENST00000482096 NACADO15069 1562 aa18.42■□□□□ 0.54
UBE2F-222ENST00000482096 DCAF8L2P0C7V8 631 aa18.33■□□□□ 0.52
UBE2F-222ENST00000482096 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
UBE2F-222ENST00000482096 MYO15BQ96JP2 1530 aa18.16■□□□□ 0.5
UBE2F-222ENST00000482096 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
UBE2F-222ENST00000482096 MSH5O43196 834 aa18.03■□□□□ 0.48
UBE2F-222ENST00000482096 BICRAQ9NZM4 1560 aa18.03■□□□□ 0.48
UBE2F-222ENST00000482096 ZCCHC6Q5VYS8 1495 aaKnown RBP17.91■□□□□ 0.46
UBE2F-222ENST00000482096 DCAF1Q9Y4B6 1507 aa17.89■□□□□ 0.45
UBE2F-222ENST00000482096 SHROOM4Q9ULL8 1493 aa17.8■□□□□ 0.44
UBE2F-222ENST00000482096 SCRIBQ14160 1630 aa17.68■□□□□ 0.42
UBE2F-222ENST00000482096 CC2D2AQ9P2K1 1620 aa17.64■□□□□ 0.41
UBE2F-222ENST00000482096 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
UBE2F-222ENST00000482096 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
UBE2F-222ENST00000482096 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
UBE2F-222ENST00000482096 KCNA4P22459 653 aa17.39■□□□□ 0.37
UBE2F-222ENST00000482096 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
UBE2F-222ENST00000482096 MAPK8IP2Q13387 824 aaPredicted RBP17.24■□□□□ 0.35
UBE2F-222ENST00000482096 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
UBE2F-222ENST00000482096 CNKSR2Q8WXI2 1034 aa17.07■□□□□ 0.32
UBE2F-222ENST00000482096 DNAJC5Q9H3Z4 198 aa17.06■□□□□ 0.32
UBE2F-222ENST00000482096 NCAPD3P42695 1498 aa17.05■□□□□ 0.32
UBE2F-222ENST00000482096 ATAD2BQ9ULI0 1458 aa16.97■□□□□ 0.31
UBE2F-222ENST00000482096 NPM3O75607 178 aaKnown RBP16.96■□□□□ 0.31
UBE2F-222ENST00000482096 DMRT2Q9Y5R5 561 aa16.92■□□□□ 0.3
UBE2F-222ENST00000482096 CUX2O14529 1486 aa16.92■□□□□ 0.3
UBE2F-222ENST00000482096 SMARCA2P51531 1590 aa16.89■□□□□ 0.29
UBE2F-222ENST00000482096 ERCC6Q03468 1493 aa16.88■□□□□ 0.29
UBE2F-222ENST00000482096 SMARCA4P51532 1647 aa16.88■□□□□ 0.29
UBE2F-222ENST00000482096 HMGXB3Q12766 1538 aa16.87■□□□□ 0.29
UBE2F-222ENST00000482096 BAZ1AQ9NRL2 1556 aaPredicted RBP16.8■□□□□ 0.28
UBE2F-222ENST00000482096 BAZ1BQ9UIG0 1483 aaKnown RBP16.77■□□□□ 0.28
UBE2F-222ENST00000482096 NESP48681 1621 aa16.77■□□□□ 0.27
UBE2F-222ENST00000482096 PEG3Q9GZU2 1588 aa16.73■□□□□ 0.27
UBE2F-222ENST00000482096 RNF216Q9NWF9 866 aaPredicted RBP16.69■□□□□ 0.26
UBE2F-222ENST00000482096 MROH2BQ7Z745 1585 aa16.67■□□□□ 0.26
UBE2F-222ENST00000482096 LAMC3Q9Y6N6 1575 aa16.63■□□□□ 0.25
UBE2F-222ENST00000482096 HOXD11P31277 338 aaPredicted RBP16.59■□□□□ 0.25
UBE2F-222ENST00000482096 THOC2Q8NI27 1593 aaKnown RBP16.59■□□□□ 0.25
UBE2F-222ENST00000482096 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
UBE2F-222ENST00000482096 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
UBE2F-222ENST00000482096 CADPSQ9ULU8 1353 aa16.52■□□□□ 0.24
UBE2F-222ENST00000482096 KIF21AQ7Z4S6 1674 aa16.49■□□□□ 0.23
UBE2F-222ENST00000482096 WIZO95785 1651 aa16.43■□□□□ 0.22
UBE2F-222ENST00000482096 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
UBE2F-222ENST00000482096 WDR62O43379 1518 aa16.37■□□□□ 0.21
UBE2F-222ENST00000482096 CEP164Q9UPV0 1460 aa16.33■□□□□ 0.2
UBE2F-222ENST00000482096 RSF1Q96T23 1441 aaPredicted RBP16.32■□□□□ 0.2
UBE2F-222ENST00000482096 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
UBE2F-222ENST00000482096 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
UBE2F-222ENST00000482096 CFTRP13569 1480 aa16.3■□□□□ 0.2
UBE2F-222ENST00000482096 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
UBE2F-222ENST00000482096 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
UBE2F-222ENST00000482096 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
UBE2F-222ENST00000482096 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
UBE2F-222ENST00000482096 URB2Q14146 1524 aaKnown RBP16.18■□□□□ 0.18
UBE2F-222ENST00000482096 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
UBE2F-222ENST00000482096 CCDC88BA6NC98 1476 aa16.08■□□□□ 0.16
UBE2F-222ENST00000482096 ZBTB22O15209 634 aa16.02■□□□□ 0.16
UBE2F-222ENST00000482096 IFT140Q96RY7 1462 aa16.02■□□□□ 0.15
UBE2F-222ENST00000482096 PRDM2Q13029 1718 aa16.01■□□□□ 0.15
UBE2F-222ENST00000482096 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
UBE2F-222ENST00000482096 ZNF608Q9ULD9 1512 aaPredicted RBP15.99■□□□□ 0.15
UBE2F-222ENST00000482096 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
UBE2F-222ENST00000482096 TOPBP1Q92547 1522 aa15.98■□□□□ 0.15
UBE2F-222ENST00000482096 ABCC8Q09428 1581 aa15.96■□□□□ 0.14
UBE2F-222ENST00000482096 FOXD4L1Q9NU39 408 aa15.94■□□□□ 0.14
UBE2F-222ENST00000482096 DNMBPQ6XZF7 1577 aa15.89■□□□□ 0.13
UBE2F-222ENST00000482096 RIMBP3CA6NJZ7 1639 aa15.88■□□□□ 0.13
UBE2F-222ENST00000482096 RIMBP3BA6NNM3 1639 aa15.88■□□□□ 0.13
UBE2F-222ENST00000482096 RIMBP3Q9UFD9 1639 aa15.88■□□□□ 0.13
UBE2F-222ENST00000482096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.86■□□□□ 0.13
UBE2F-222ENST00000482096 ARHGEF11O15085 1522 aa15.85■□□□□ 0.13
UBE2F-222ENST00000482096 EIF4G3O43432 1585 aaKnown RBP15.85■□□□□ 0.13
UBE2F-222ENST00000482096 AQRO60306 1485 aaKnown RBP eCLIP15.84■□□□□ 0.132e-8■■■■□ 19.7
UBE2F-222ENST00000482096 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.12
UBE2F-222ENST00000482096 POLA1P09884 1462 aaPredicted RBP15.82■□□□□ 0.12
UBE2F-222ENST00000482096 CYB5RLQ6IPT4 315 aa15.78■□□□□ 0.12
UBE2F-222ENST00000482096 FBLN2P98095 1184 aa15.76■□□□□ 0.11
UBE2F-222ENST00000482096 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
UBE2F-222ENST00000482096 SOGA1O94964 1423 aa15.76■□□□□ 0.11
UBE2F-222ENST00000482096 TDRD9Q8NDG6 1382 aaKnown RBP15.75■□□□□ 0.11
UBE2F-222ENST00000482096 CHD1O14646 1710 aa15.72■□□□□ 0.11
UBE2F-222ENST00000482096 ARAP1Q96P48 1450 aa15.7■□□□□ 0.1
UBE2F-222ENST00000482096 FGD5Q6ZNL6 1462 aa15.69■□□□□ 0.1
UBE2F-222ENST00000482096 CUX1P39880 1505 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms