RNA–Protein interactions for RNA: ENST00000481932.1

SH3YL1-223, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 3

Gene SH3YL1, Length 885 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-223ENST00000481932 AEBP2Q6ZN18 517 aaPredicted RBP25.23■■□□□ 1.63
SH3YL1-223ENST00000481932 CHIC1Q5VXU3 224 aa24.39■■□□□ 1.49
SH3YL1-223ENST00000481932 SENP3Q9H4L4 574 aaPredicted RBP21.54■■□□□ 1.04
SH3YL1-223ENST00000481932 PHF23Q9BUL5 403 aaPredicted RBP21.36■■□□□ 1.01
SH3YL1-223ENST00000481932 FOXD1Q16676 465 aa19.97■□□□□ 0.79
SH3YL1-223ENST00000481932 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
SH3YL1-223ENST00000481932 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
SH3YL1-223ENST00000481932 PPP6R1Q9UPN7 881 aa18.93■□□□□ 0.62
SH3YL1-223ENST00000481932 ADRA2BP18089 450 aa18.9■□□□□ 0.62
SH3YL1-223ENST00000481932 PIAS4Q8N2W9 510 aaPredicted RBP18.78■□□□□ 0.6
SH3YL1-223ENST00000481932 MSH5O43196 834 aa18.61■□□□□ 0.57
SH3YL1-223ENST00000481932 CCDC180Q9P1Z9 1646 aa17.91■□□□□ 0.46
SH3YL1-223ENST00000481932 ABCC9O60706 1549 aa17.77■□□□□ 0.44
SH3YL1-223ENST00000481932 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
SH3YL1-223ENST00000481932 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
SH3YL1-223ENST00000481932 PPP4R3CPQ6ZMV5 832 aa17.28■□□□□ 0.36
SH3YL1-223ENST00000481932 MAPK8IP2Q13387 824 aaPredicted RBP17.23■□□□□ 0.35
SH3YL1-223ENST00000481932 DMRT2Q9Y5R5 561 aa17.12■□□□□ 0.33
SH3YL1-223ENST00000481932 RB1CC1Q8TDY2 1594 aa16.98■□□□□ 0.31
SH3YL1-223ENST00000481932 CNKSR2Q8WXI2 1034 aa16.89■□□□□ 0.29
SH3YL1-223ENST00000481932 NACADO15069 1562 aa16.86■□□□□ 0.29
SH3YL1-223ENST00000481932 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
SH3YL1-223ENST00000481932 MYO15BQ96JP2 1530 aa16.66■□□□□ 0.26
SH3YL1-223ENST00000481932 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
SH3YL1-223ENST00000481932 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
SH3YL1-223ENST00000481932 UNC13AQ9UPW8 1703 aa16.62■□□□□ 0.25
SH3YL1-223ENST00000481932 DCAF8L2P0C7V8 631 aa16.56■□□□□ 0.24
SH3YL1-223ENST00000481932 DNAJC5BQ9UF47 199 aa16.54■□□□□ 0.24
SH3YL1-223ENST00000481932 ZCCHC6Q5VYS8 1495 aaKnown RBP16.53■□□□□ 0.24
SH3YL1-223ENST00000481932 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
SH3YL1-223ENST00000481932 KCNA4P22459 653 aa16.49■□□□□ 0.23
SH3YL1-223ENST00000481932 BICRAQ9NZM4 1560 aa16.48■□□□□ 0.23
SH3YL1-223ENST00000481932 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
SH3YL1-223ENST00000481932 PABPN1Q86U42 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
SH3YL1-223ENST00000481932 DCAF8L1A6NGE4 600 aa16.36■□□□□ 0.21
SH3YL1-223ENST00000481932 SHROOM4Q9ULL8 1493 aa16.34■□□□□ 0.21
SH3YL1-223ENST00000481932 SCRIBQ14160 1630 aa16.28■□□□□ 0.2
SH3YL1-223ENST00000481932 CC2D2AQ9P2K1 1620 aa16.09■□□□□ 0.17
SH3YL1-223ENST00000481932 EIF4G1Q04637 1599 aaKnown RBP16.09■□□□□ 0.17
SH3YL1-223ENST00000481932 CECR2Q9BXF3 1484 aa16.02■□□□□ 0.15
SH3YL1-223ENST00000481932 RNF39Q9H2S5 420 aa15.88■□□□□ 0.13
SH3YL1-223ENST00000481932 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.13
SH3YL1-223ENST00000481932 C1QBPQ07021 282 aaKnown RBP15.7■□□□□ 0.1
SH3YL1-223ENST00000481932 CACNB1Q02641 598 aaPredicted RBP15.68■□□□□ 0.1
SH3YL1-223ENST00000481932 SLC4A1APQ9BWU0 796 aaKnown RBP15.68■□□□□ 0.1
SH3YL1-223ENST00000481932 SLC4A2P04920 1241 aa15.62■□□□□ 0.09
SH3YL1-223ENST00000481932 U3KPZ7 1027 aaPredicted RBP15.56■□□□□ 0.08
SH3YL1-223ENST00000481932 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
SH3YL1-223ENST00000481932 NCAPD3P42695 1498 aa15.52■□□□□ 0.08
SH3YL1-223ENST00000481932 HMGXB3Q12766 1538 aa15.5■□□□□ 0.07
SH3YL1-223ENST00000481932 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
SH3YL1-223ENST00000481932 ATAD2BQ9ULI0 1458 aa15.49■□□□□ 0.07
SH3YL1-223ENST00000481932 BAZ1AQ9NRL2 1556 aaPredicted RBP15.45■□□□□ 0.06
SH3YL1-223ENST00000481932 PEG3Q9GZU2 1588 aa15.4■□□□□ 0.06
SH3YL1-223ENST00000481932 CUX2O14529 1486 aa15.37■□□□□ 0.05
SH3YL1-223ENST00000481932 ERCC6Q03468 1493 aa15.37■□□□□ 0.05
SH3YL1-223ENST00000481932 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
SH3YL1-223ENST00000481932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.32■□□□□ 0.04
SH3YL1-223ENST00000481932 HNRNPUL2Q1KMD3 747 aaKnown RBP15.32■□□□□ 0.04
SH3YL1-223ENST00000481932 FOXD4L1Q9NU39 408 aa15.32■□□□□ 0.04
SH3YL1-223ENST00000481932 MROH2BQ7Z745 1585 aa15.3■□□□□ 0.04
SH3YL1-223ENST00000481932 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
SH3YL1-223ENST00000481932 NESP48681 1621 aa15.28■□□□□ 0.04
SH3YL1-223ENST00000481932 APLP2Q06481 763 aa15.25■□□□□ 0.03
SH3YL1-223ENST00000481932 SAMD1Q6SPF0 538 aaPredicted RBP15.24■□□□□ 0.03
SH3YL1-223ENST00000481932 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
SH3YL1-223ENST00000481932 THOC2Q8NI27 1593 aaKnown RBP15.22■□□□□ 0.03
SH3YL1-223ENST00000481932 DNAJC5Q9H3Z4 198 aa15.18■□□□□ 0.02
SH3YL1-223ENST00000481932 SPINK5Q9NQ38 1064 aaPredicted RBP15.18■□□□□ 0.02
SH3YL1-223ENST00000481932 CAPN15O75808 1086 aa15.17■□□□□ 0.02
SH3YL1-223ENST00000481932 ZBTB22O15209 634 aa15.16■□□□□ 0.02
SH3YL1-223ENST00000481932 KIF21AQ7Z4S6 1674 aa15.14■□□□□ 0.01
SH3YL1-223ENST00000481932 WIZO95785 1651 aa15.12■□□□□ 0.01
SH3YL1-223ENST00000481932 PDS5BQ9NTI5 1447 aa15.09■□□□□ 0.01
SH3YL1-223ENST00000481932 ZNF219Q9P2Y4 722 aaPredicted RBP15.06■□□□□ 0
SH3YL1-223ENST00000481932 CADPSQ9ULU8 1353 aa15.03■□□□□ -0
SH3YL1-223ENST00000481932 TRHP20396 242 aaPredicted RBP15□□□□□ -0.01
SH3YL1-223ENST00000481932 MRC2Q9UBG0 1479 aa15□□□□□ -0.01
SH3YL1-223ENST00000481932 WDR62O43379 1518 aa14.99□□□□□ -0.01
SH3YL1-223ENST00000481932 DSG3P32926 999 aa14.99□□□□□ -0.01
SH3YL1-223ENST00000481932 TOP2AP11388 1531 aaKnown RBP14.98□□□□□ -0.01
SH3YL1-223ENST00000481932 RSF1Q96T23 1441 aaPredicted RBP14.96□□□□□ -0.01
SH3YL1-223ENST00000481932 CEP164Q9UPV0 1460 aa14.95□□□□□ -0.02
SH3YL1-223ENST00000481932 CFTRP13569 1480 aa14.9□□□□□ -0.02
SH3YL1-223ENST00000481932 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
SH3YL1-223ENST00000481932 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
SH3YL1-223ENST00000481932 ATXN8OSP0DMR3 200 aa14.84□□□□□ -0.03
SH3YL1-223ENST00000481932 EHMT2Q96KQ7 1210 aa14.84□□□□□ -0.03
SH3YL1-223ENST00000481932 CSRNP3Q8WYN3 585 aa14.83□□□□□ -0.04
SH3YL1-223ENST00000481932 ABCB7O75027 752 aa14.82□□□□□ -0.04
SH3YL1-223ENST00000481932 ATF5Q9Y2D1 282 aaPredicted RBP14.82□□□□□ -0.04
SH3YL1-223ENST00000481932 URB2Q14146 1524 aaKnown RBP14.79□□□□□ -0.04
SH3YL1-223ENST00000481932 CCDC88BA6NC98 1476 aa14.73□□□□□ -0.05
SH3YL1-223ENST00000481932 POLA2Q14181 598 aa14.69□□□□□ -0.06
SH3YL1-223ENST00000481932 TOPBP1Q92547 1522 aa14.63□□□□□ -0.07
SH3YL1-223ENST00000481932 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
SH3YL1-223ENST00000481932 DNMBPQ6XZF7 1577 aa14.61□□□□□ -0.07
SH3YL1-223ENST00000481932 EIF4G3O43432 1585 aaKnown RBP14.59□□□□□ -0.07
SH3YL1-223ENST00000481932 ZNF608Q9ULD9 1512 aaPredicted RBP14.58□□□□□ -0.08
SH3YL1-223ENST00000481932 ABCC8Q09428 1581 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms