RNA–Protein interactions for RNA: ENST00000480265.1

SNAP47-209, Transcript of synaptosome associated protein 47, humanhuman

TSL 2

Gene SNAP47, Length 2,202 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-209ENST00000480265 NISCHQ9Y2I1 1504 aa35.59■■■■□ 3.29
SNAP47-209ENST00000480265 SHROOM4Q9ULL8 1493 aa30.35■■■□□ 2.45
SNAP47-209ENST00000480265 CCDC180Q9P1Z9 1646 aa30.25■■■□□ 2.43
SNAP47-209ENST00000480265 ZCCHC6Q5VYS8 1495 aaKnown RBP30.12■■■□□ 2.41
SNAP47-209ENST00000480265 SUPT5HO00267 1087 aaKnown RBP29.72■■■□□ 2.35
SNAP47-209ENST00000480265 DCAF8L2P0C7V8 631 aa29.45■■■□□ 2.3
SNAP47-209ENST00000480265 DCAF1Q9Y4B6 1507 aa29.19■■■□□ 2.26
SNAP47-209ENST00000480265 CHIC1Q5VXU3 224 aa28.93■■■□□ 2.22
SNAP47-209ENST00000480265 MYO15BQ96JP2 1530 aa28.89■■■□□ 2.22
SNAP47-209ENST00000480265 ABCC9O60706 1549 aa28.43■■■□□ 2.14
SNAP47-209ENST00000480265 SCRIBQ14160 1630 aa28.39■■■□□ 2.14
SNAP47-209ENST00000480265 RSF1Q96T23 1441 aaPredicted RBP28.17■■■□□ 2.1
SNAP47-209ENST00000480265 LOC105371045A0A1W2PR82 267 aa28.08■■■□□ 2.09
SNAP47-209ENST00000480265 HRCP23327 699 aa28.02■■■□□ 2.08
SNAP47-209ENST00000480265 PCGF6Q9BYE7 350 aa28.01■■■□□ 2.07
SNAP47-209ENST00000480265 NACADO15069 1562 aa27.95■■■□□ 2.07
SNAP47-209ENST00000480265 RB1CC1Q8TDY2 1594 aa27.91■■■□□ 2.06
SNAP47-209ENST00000480265 CECR2Q9BXF3 1484 aa27.79■■■□□ 2.04
SNAP47-209ENST00000480265 MROH2BQ7Z745 1585 aa27.7■■■□□ 2.02
SNAP47-209ENST00000480265 TRIM41Q8WV44 630 aa27.67■■■□□ 2.02
SNAP47-209ENST00000480265 WIZO95785 1651 aa27.56■■■□□ 2
SNAP47-209ENST00000480265 PPARGC1BQ86YN6 1023 aaKnown RBP27.49■■□□□ 1.99
SNAP47-209ENST00000480265 FAM9AQ8IZU1 332 aaPredicted RBP27.47■■□□□ 1.99
SNAP47-209ENST00000480265 TRIM26Q12899 539 aaPredicted RBP27.45■■□□□ 1.99
SNAP47-209ENST00000480265 BAZ1AQ9NRL2 1556 aaPredicted RBP27.36■■□□□ 1.97
SNAP47-209ENST00000480265 EHMT2Q96KQ7 1210 aa27.25■■□□□ 1.95
SNAP47-209ENST00000480265 EIF4G1Q04637 1599 aaKnown RBP27.22■■□□□ 1.95
SNAP47-209ENST00000480265 UNC13AQ9UPW8 1703 aa27.17■■□□□ 1.94
SNAP47-209ENST00000480265 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
SNAP47-209ENST00000480265 TOP2AP11388 1531 aaKnown RBP27.09■■□□□ 1.93
SNAP47-209ENST00000480265 CCDC88BA6NC98 1476 aa26.99■■□□□ 1.91
SNAP47-209ENST00000480265 SMARCA2P51531 1590 aa26.97■■□□□ 1.91
SNAP47-209ENST00000480265 ABCC8Q09428 1581 aa26.94■■□□□ 1.9
SNAP47-209ENST00000480265 BICRAQ9NZM4 1560 aa26.82■■□□□ 1.88
SNAP47-209ENST00000480265 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
SNAP47-209ENST00000480265 ZEB1P37275 1124 aaPredicted RBP26.8■■□□□ 1.88
SNAP47-209ENST00000480265 SOGA1O94964 1423 aa26.68■■□□□ 1.86
SNAP47-209ENST00000480265 PEG3Q9GZU2 1588 aa26.59■■□□□ 1.85
SNAP47-209ENST00000480265 RUSC2Q8N2Y8 1516 aa26.57■■□□□ 1.84
SNAP47-209ENST00000480265 CEP162Q5TB80 1403 aa26.53■■□□□ 1.84
SNAP47-209ENST00000480265 WRNQ14191 1432 aaPredicted RBP eCLIP26.49■■□□□ 1.83
SNAP47-209ENST00000480265 TNIKQ9UKE5 1360 aa26.47■■□□□ 1.83
SNAP47-209ENST00000480265 EEA1Q15075 1411 aa26.47■■□□□ 1.83
SNAP47-209ENST00000480265 CSRNP3Q8WYN3 585 aa26.47■■□□□ 1.83
SNAP47-209ENST00000480265 ATAD2BQ9ULI0 1458 aa26.41■■□□□ 1.82
SNAP47-209ENST00000480265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.4■■□□□ 1.82
SNAP47-209ENST00000480265 TTBK1Q5TCY1 1321 aaPredicted RBP26.37■■□□□ 1.81
SNAP47-209ENST00000480265 SYNJ1O43426 1573 aa26.37■■□□□ 1.81
SNAP47-209ENST00000480265 UBTFP17480 764 aaKnown RBP26.35■■□□□ 1.81
SNAP47-209ENST00000480265 GOLGA3Q08378 1498 aa26.32■■□□□ 1.8
SNAP47-209ENST00000480265 BAZ1BQ9UIG0 1483 aaKnown RBP26.32■■□□□ 1.8
SNAP47-209ENST00000480265 CCER1Q8TC90 406 aaPredicted RBP26.29■■□□□ 1.8
SNAP47-209ENST00000480265 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
SNAP47-209ENST00000480265 KIF21BO75037 1637 aa26.16■■□□□ 1.78
SNAP47-209ENST00000480265 CLIP1P30622 1438 aa26.03■■□□□ 1.76
SNAP47-209ENST00000480265 RAPGEF2Q9Y4G8 1499 aa26.02■■□□□ 1.76
SNAP47-209ENST00000480265 TOP2BQ02880 1626 aa26.01■■□□□ 1.76
SNAP47-209ENST00000480265 BIVM-ERCC5R4GMW8 1640 aa25.93■■□□□ 1.74
SNAP47-209ENST00000480265 VPS8Q8N3P4 1428 aa25.92■■□□□ 1.74
SNAP47-209ENST00000480265 HMGXB3Q12766 1538 aa25.88■■□□□ 1.73
SNAP47-209ENST00000480265 NCAPD3P42695 1498 aa25.88■■□□□ 1.73
SNAP47-209ENST00000480265 RANGAP1P46060 587 aaPredicted RBP25.85■■□□□ 1.73
SNAP47-209ENST00000480265 SCAF1Q9H7N4 1312 aaKnown RBP25.83■■□□□ 1.73
SNAP47-209ENST00000480265 HNRNPUL2Q1KMD3 747 aaKnown RBP25.79■■□□□ 1.72
SNAP47-209ENST00000480265 CUX1P39880 1505 aa25.78■■□□□ 1.72
SNAP47-209ENST00000480265 DIEXFQ68CQ4 756 aaKnown RBP25.77■■□□□ 1.72
SNAP47-209ENST00000480265 PRXQ9BXM0 1461 aa25.76■■□□□ 1.71
SNAP47-209ENST00000480265 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
SNAP47-209ENST00000480265 APLP2Q06481 763 aa25.71■■□□□ 1.71
SNAP47-209ENST00000480265 CFTRP13569 1480 aa25.68■■□□□ 1.7
SNAP47-209ENST00000480265 ARAP1Q96P48 1450 aa25.66■■□□□ 1.7
SNAP47-209ENST00000480265 KIF27Q86VH2 1401 aa25.61■■□□□ 1.69
SNAP47-209ENST00000480265 ZNF316A6NFI3 1004 aaPredicted RBP25.59■■□□□ 1.69
SNAP47-209ENST00000480265 ACIN1Q9UKV3 1341 aaKnown RBP25.56■■□□□ 1.68
SNAP47-209ENST00000480265 NEUROD1Q13562 356 aa25.56■■□□□ 1.68
SNAP47-209ENST00000480265 KANK4Q5T7N3 995 aaPredicted RBP25.5■■□□□ 1.67
SNAP47-209ENST00000480265 PRDM2Q13029 1718 aa25.49■■□□□ 1.67
SNAP47-209ENST00000480265 DNAJC5BQ9UF47 199 aa25.45■■□□□ 1.67
SNAP47-209ENST00000480265 CC2D2AQ9P2K1 1620 aa25.43■■□□□ 1.66
SNAP47-209ENST00000480265 ARHGAP35Q9NRY4 1499 aa25.42■■□□□ 1.66
SNAP47-209ENST00000480265 CUX2O14529 1486 aa25.39■■□□□ 1.65
SNAP47-209ENST00000480265 CADPSQ9ULU8 1353 aa25.38■■□□□ 1.65
SNAP47-209ENST00000480265 IGF1RP08069 1367 aa25.36■■□□□ 1.65
SNAP47-209ENST00000480265 CENPBP07199 599 aaPredicted RBP25.35■■□□□ 1.65
SNAP47-209ENST00000480265 RRBP1Q9P2E9 1410 aaKnown RBP25.32■■□□□ 1.64
SNAP47-209ENST00000480265 DHX57Q6P158 1386 aaKnown RBP25.31■■□□□ 1.64
SNAP47-209ENST00000480265 FGD5Q6ZNL6 1462 aa25.3■■□□□ 1.64
SNAP47-209ENST00000480265 GTF3C3Q9Y5Q9 886 aa25.27■■□□□ 1.64
SNAP47-209ENST00000480265 MIER1Q8N108 512 aa25.25■■□□□ 1.63
SNAP47-209ENST00000480265 CARMIL1Q5VZK9 1371 aa25.23■■□□□ 1.63
SNAP47-209ENST00000480265 CLSPNQ9HAW4 1339 aa25.22■■□□□ 1.63
SNAP47-209ENST00000480265 CCNB3Q8WWL7 1395 aa25.2■■□□□ 1.63
SNAP47-209ENST00000480265 YTHDC1Q96MU7 727 aaKnown RBP25.17■■□□□ 1.62
SNAP47-209ENST00000480265 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
SNAP47-209ENST00000480265 TIAM1Q13009 1591 aa25.14■■□□□ 1.61
SNAP47-209ENST00000480265 PELP1Q8IZL8 1130 aaKnown RBP25.11■■□□□ 1.61
SNAP47-209ENST00000480265 ITGAEP38570 1179 aa25.1■■□□□ 1.61
SNAP47-209ENST00000480265 MAP3K1Q13233 1512 aa25.08■■□□□ 1.61
SNAP47-209ENST00000480265 RAD54L2Q9Y4B4 1467 aa25.06■■□□□ 1.6
SNAP47-209ENST00000480265 DNMBPQ6XZF7 1577 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms