RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 CHIC1Q5VXU3 224 aa11.86□□□□□ -0.51
COPS7B-220ENST00000479430 AEBP2Q6ZN18 517 aaPredicted RBP11.73□□□□□ -0.53
COPS7B-220ENST00000479430 PHF23Q9BUL5 403 aaPredicted RBP10.58□□□□□ -0.72
COPS7B-220ENST00000479430 NISCHQ9Y2I1 1504 aa10.1□□□□□ -0.79
COPS7B-220ENST00000479430 PLPPR3Q6T4P5 718 aa9.83□□□□□ -0.84
COPS7B-220ENST00000479430 SENP3Q9H4L4 574 aaPredicted RBP9.75□□□□□ -0.85
COPS7B-220ENST00000479430 ABCC9O60706 1549 aa9.57□□□□□ -0.88
COPS7B-220ENST00000479430 ADRA2BP18089 450 aa9.32□□□□□ -0.92
COPS7B-220ENST00000479430 DNAJC5BQ9UF47 199 aa9.26□□□□□ -0.93
COPS7B-220ENST00000479430 PPP6R1Q9UPN7 881 aa9.2□□□□□ -0.94
COPS7B-220ENST00000479430 KCNA4P22459 653 aa9.18□□□□□ -0.94
COPS7B-220ENST00000479430 EHMT2Q96KQ7 1210 aa9.18□□□□□ -0.94
COPS7B-220ENST00000479430 CCDC180Q9P1Z9 1646 aa9.15□□□□□ -0.94
COPS7B-220ENST00000479430 FOXD1Q16676 465 aa9.08□□□□□ -0.96
COPS7B-220ENST00000479430 PABPN1Q86U42 306 aaKnown RBP eCLIP8.91□□□□□ -0.98
COPS7B-220ENST00000479430 UNC13AQ9UPW8 1703 aa8.88□□□□□ -0.99
COPS7B-220ENST00000479430 DCAF8L2P0C7V8 631 aa8.84□□□□□ -0.99
COPS7B-220ENST00000479430 RB1CC1Q8TDY2 1594 aa8.84□□□□□ -0.99
COPS7B-220ENST00000479430 CSRNP3Q8WYN3 585 aa8.83□□□□□ -1
COPS7B-220ENST00000479430 SLC4A1APQ9BWU0 796 aaKnown RBP8.79□□□□□ -1
COPS7B-220ENST00000479430 PPP4R3CPQ6ZMV5 832 aa8.78□□□□□ -1
COPS7B-220ENST00000479430 BICRAQ9NZM4 1560 aa8.69□□□□□ -1.02
COPS7B-220ENST00000479430 NACADO15069 1562 aa8.66□□□□□ -1.02
COPS7B-220ENST00000479430 PIAS4Q8N2W9 510 aaPredicted RBP8.65□□□□□ -1.02
COPS7B-220ENST00000479430 NCBP3Q53F19 620 aaKnown RBP8.63□□□□□ -1.03
COPS7B-220ENST00000479430 CC2D2AQ9P2K1 1620 aa8.6□□□□□ -1.03
COPS7B-220ENST00000479430 NPM3O75607 178 aaKnown RBP8.58□□□□□ -1.04
COPS7B-220ENST00000479430 CECR2Q9BXF3 1484 aa8.56□□□□□ -1.04
COPS7B-220ENST00000479430 DNAJC5Q9H3Z4 198 aa8.53□□□□□ -1.04
COPS7B-220ENST00000479430 SCRIBQ14160 1630 aa8.51□□□□□ -1.05
COPS7B-220ENST00000479430 ZBTB22O15209 634 aa8.48□□□□□ -1.05
COPS7B-220ENST00000479430 EIF4G1Q04637 1599 aaKnown RBP8.46□□□□□ -1.06
COPS7B-220ENST00000479430 CNKSR2Q8WXI2 1034 aa8.38□□□□□ -1.07
COPS7B-220ENST00000479430 MYO15BQ96JP2 1530 aa8.33□□□□□ -1.08
COPS7B-220ENST00000479430 ZCCHC6Q5VYS8 1495 aaKnown RBP8.3□□□□□ -1.08
COPS7B-220ENST00000479430 SCAF1Q9H7N4 1312 aaKnown RBP8.29□□□□□ -1.08
COPS7B-220ENST00000479430 POTEDQ86YR6 584 aa8.24□□□□□ -1.09
COPS7B-220ENST00000479430 MAPK8IP2Q13387 824 aaPredicted RBP8.23□□□□□ -1.09
COPS7B-220ENST00000479430 TRIM41Q8WV44 630 aa8.23□□□□□ -1.09
COPS7B-220ENST00000479430 SHROOM4Q9ULL8 1493 aa8.23□□□□□ -1.09
COPS7B-220ENST00000479430 FOXD4L1Q9NU39 408 aa8.22□□□□□ -1.09
COPS7B-220ENST00000479430 ERCC6Q03468 1493 aa8.2□□□□□ -1.1
COPS7B-220ENST00000479430 NESP48681 1621 aa8.18□□□□□ -1.1
COPS7B-220ENST00000479430 DCAF1Q9Y4B6 1507 aa8.18□□□□□ -1.1
COPS7B-220ENST00000479430 CUX2O14529 1486 aa8.15□□□□□ -1.1
COPS7B-220ENST00000479430 RTN4Q9NQC3 1192 aaKnown RBP8.14□□□□□ -1.11
COPS7B-220ENST00000479430 SLC24A1O60721 1099 aa8.11□□□□□ -1.11
COPS7B-220ENST00000479430 KIF21AQ7Z4S6 1674 aa8.09□□□□□ -1.11
COPS7B-220ENST00000479430 RNF216Q9NWF9 866 aaPredicted RBP8.09□□□□□ -1.11
COPS7B-220ENST00000479430 SMARCA2P51531 1590 aa8.08□□□□□ -1.12
COPS7B-220ENST00000479430 MSH5O43196 834 aa8.07□□□□□ -1.12
COPS7B-220ENST00000479430 THOC2Q8NI27 1593 aaKnown RBP8.06□□□□□ -1.12
COPS7B-220ENST00000479430 AMER1Q5JTC6 1135 aaPredicted RBP8.04□□□□□ -1.12
COPS7B-220ENST00000479430 ATAD2BQ9ULI0 1458 aa8□□□□□ -1.13
COPS7B-220ENST00000479430 NCAPD3P42695 1498 aa8□□□□□ -1.13
COPS7B-220ENST00000479430 SLC4A2P04920 1241 aa7.99□□□□□ -1.13
COPS7B-220ENST00000479430 SMARCA4P51532 1647 aa7.99□□□□□ -1.13
COPS7B-220ENST00000479430 HOXD11P31277 338 aaPredicted RBP7.93□□□□□ -1.14
COPS7B-220ENST00000479430 FKBP8Q14318 412 aa7.93□□□□□ -1.14
COPS7B-220ENST00000479430 BAZ1BQ9UIG0 1483 aaKnown RBP7.93□□□□□ -1.14
COPS7B-220ENST00000479430 HMGXB3Q12766 1538 aa7.92□□□□□ -1.14
COPS7B-220ENST00000479430 BAZ1AQ9NRL2 1556 aaPredicted RBP7.91□□□□□ -1.14
COPS7B-220ENST00000479430 DMRT2Q9Y5R5 561 aa7.89□□□□□ -1.15
COPS7B-220ENST00000479430 LAMC3Q9Y6N6 1575 aa7.88□□□□□ -1.15
COPS7B-220ENST00000479430 ATXN8OSP0DMR3 200 aa7.87□□□□□ -1.15
COPS7B-220ENST00000479430 MROH2BQ7Z745 1585 aa7.87□□□□□ -1.15
COPS7B-220ENST00000479430 RIMBP3CA6NJZ7 1639 aa7.85□□□□□ -1.15
COPS7B-220ENST00000479430 RIMBP3BA6NNM3 1639 aa7.85□□□□□ -1.15
COPS7B-220ENST00000479430 RIMBP3Q9UFD9 1639 aa7.85□□□□□ -1.15
COPS7B-220ENST00000479430 MYCNP04198 464 aaPredicted RBP7.85□□□□□ -1.15
COPS7B-220ENST00000479430 WIZO95785 1651 aa7.84□□□□□ -1.15
COPS7B-220ENST00000479430 MRC2Q9UBG0 1479 aa7.83□□□□□ -1.16
COPS7B-220ENST00000479430 PDS5BQ9NTI5 1447 aa7.82□□□□□ -1.16
COPS7B-220ENST00000479430 WDR62O43379 1518 aa7.82□□□□□ -1.16
COPS7B-220ENST00000479430 OSCARQ8IYS5 282 aa7.8□□□□□ -1.16
COPS7B-220ENST00000479430 PEG3Q9GZU2 1588 aa7.78□□□□□ -1.16
COPS7B-220ENST00000479430 CADPSQ9ULU8 1353 aa7.77□□□□□ -1.17
COPS7B-220ENST00000479430 TRHP20396 242 aaPredicted RBP7.77□□□□□ -1.17
COPS7B-220ENST00000479430 CEP164Q9UPV0 1460 aa7.75□□□□□ -1.17
COPS7B-220ENST00000479430 CYB5RLQ6IPT4 315 aa7.75□□□□□ -1.17
COPS7B-220ENST00000479430 URB2Q14146 1524 aaKnown RBP7.74□□□□□ -1.17
COPS7B-220ENST00000479430 FANCD2Q9BXW9 1451 aa7.74□□□□□ -1.17
COPS7B-220ENST00000479430 ZNF608Q9ULD9 1512 aaPredicted RBP7.73□□□□□ -1.17
COPS7B-220ENST00000479430 CHD1O14646 1710 aa7.73□□□□□ -1.17
COPS7B-220ENST00000479430 ATF5Q9Y2D1 282 aaPredicted RBP7.73□□□□□ -1.17
COPS7B-220ENST00000479430 ARHGEF11O15085 1522 aa7.73□□□□□ -1.17
COPS7B-220ENST00000479430 PRDM2Q13029 1718 aa7.66□□□□□ -1.18
COPS7B-220ENST00000479430 FBLN2P98095 1184 aa7.66□□□□□ -1.18
COPS7B-220ENST00000479430 ARAP1Q96P48 1450 aa7.66□□□□□ -1.18
COPS7B-220ENST00000479430 EIF4G3O43432 1585 aaKnown RBP7.64□□□□□ -1.19
COPS7B-220ENST00000479430 AQRO60306 1485 aaKnown RBP eCLIP7.62□□□□□ -1.19
COPS7B-220ENST00000479430 CFTRP13569 1480 aa7.62□□□□□ -1.19
COPS7B-220ENST00000479430 TOPBP1Q92547 1522 aa7.58□□□□□ -1.2
COPS7B-220ENST00000479430 DCAF8L1A6NGE4 600 aa7.57□□□□□ -1.2
COPS7B-220ENST00000479430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.57□□□□□ -1.2
COPS7B-220ENST00000479430 IFT140Q96RY7 1462 aa7.56□□□□□ -1.2
COPS7B-220ENST00000479430 TOP2AP11388 1531 aaKnown RBP7.56□□□□□ -1.2
COPS7B-220ENST00000479430 RAD54L2Q9Y4B4 1467 aa7.55□□□□□ -1.2
COPS7B-220ENST00000479430 TARBP1Q13395 1621 aaKnown RBP7.55□□□□□ -1.2
COPS7B-220ENST00000479430 RSF1Q96T23 1441 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms