RNA–Protein interactions for RNA: ENST00000478865.5

SVOPL-207, Transcript of SVOP like, humanhuman

TSL 2

Gene SVOPL, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOPL-207ENST00000478865 AEBP2Q6ZN18 517 aaPredicted RBP33.76■■■□□ 2.99
SVOPL-207ENST00000478865 CHIC1Q5VXU3 224 aa33■■■□□ 2.87
SVOPL-207ENST00000478865 PHF23Q9BUL5 403 aaPredicted RBP28.88■■■□□ 2.21
SVOPL-207ENST00000478865 SENP3Q9H4L4 574 aaPredicted RBP28.87■■■□□ 2.21
SVOPL-207ENST00000478865 NISCHQ9Y2I1 1504 aa27.36■■□□□ 1.97
SVOPL-207ENST00000478865 PLPPR3Q6T4P5 718 aa26.82■■□□□ 1.88
SVOPL-207ENST00000478865 FOXD1Q16676 465 aa26.66■■□□□ 1.86
SVOPL-207ENST00000478865 ADRA2BP18089 450 aa25.48■■□□□ 1.67
SVOPL-207ENST00000478865 PPP6R1Q9UPN7 881 aa25.48■■□□□ 1.67
SVOPL-207ENST00000478865 PIAS4Q8N2W9 510 aaPredicted RBP25.19■■□□□ 1.62
SVOPL-207ENST00000478865 ABCC9O60706 1549 aa24.86■■□□□ 1.57
SVOPL-207ENST00000478865 MSH5O43196 834 aa24.8■■□□□ 1.56
SVOPL-207ENST00000478865 CCDC180Q9P1Z9 1646 aa24.64■■□□□ 1.54
SVOPL-207ENST00000478865 RB1CC1Q8TDY2 1594 aa23.61■■□□□ 1.37
SVOPL-207ENST00000478865 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
SVOPL-207ENST00000478865 SCAF1Q9H7N4 1312 aaKnown RBP23.56■■□□□ 1.36
SVOPL-207ENST00000478865 PPP4R3CPQ6ZMV5 832 aa23.53■■□□□ 1.36
SVOPL-207ENST00000478865 NACADO15069 1562 aa23.4■■□□□ 1.34
SVOPL-207ENST00000478865 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
SVOPL-207ENST00000478865 PABPN1Q86U42 306 aaKnown RBP eCLIP23.12■■□□□ 1.29
SVOPL-207ENST00000478865 MAPK8IP2Q13387 824 aaPredicted RBP23.1■■□□□ 1.29
SVOPL-207ENST00000478865 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
SVOPL-207ENST00000478865 NCBP3Q53F19 620 aaKnown RBP23.01■■□□□ 1.27
SVOPL-207ENST00000478865 DMRT2Q9Y5R5 561 aa22.98■■□□□ 1.27
SVOPL-207ENST00000478865 UNC13AQ9UPW8 1703 aa22.98■■□□□ 1.27
SVOPL-207ENST00000478865 CNKSR2Q8WXI2 1034 aa22.97■■□□□ 1.27
SVOPL-207ENST00000478865 BICRAQ9NZM4 1560 aa22.87■■□□□ 1.25
SVOPL-207ENST00000478865 KCNA4P22459 653 aa22.8■■□□□ 1.24
SVOPL-207ENST00000478865 POTEDQ86YR6 584 aa22.64■■□□□ 1.21
SVOPL-207ENST00000478865 SHROOM4Q9ULL8 1493 aa22.64■■□□□ 1.21
SVOPL-207ENST00000478865 DCAF1Q9Y4B6 1507 aa22.62■■□□□ 1.21
SVOPL-207ENST00000478865 ZCCHC6Q5VYS8 1495 aaKnown RBP22.6■■□□□ 1.21
SVOPL-207ENST00000478865 RNF216Q9NWF9 866 aaPredicted RBP22.55■■□□□ 1.2
SVOPL-207ENST00000478865 NPM3O75607 178 aaKnown RBP22.53■■□□□ 1.2
SVOPL-207ENST00000478865 HOXD11P31277 338 aaPredicted RBP22.46■■□□□ 1.19
SVOPL-207ENST00000478865 CECR2Q9BXF3 1484 aa22.46■■□□□ 1.19
SVOPL-207ENST00000478865 CC2D2AQ9P2K1 1620 aa22.45■■□□□ 1.18
SVOPL-207ENST00000478865 SCRIBQ14160 1630 aa22.38■■□□□ 1.17
SVOPL-207ENST00000478865 EIF4G1Q04637 1599 aaKnown RBP22.35■■□□□ 1.17
SVOPL-207ENST00000478865 DCAF8L1A6NGE4 600 aa21.95■■□□□ 1.1
SVOPL-207ENST00000478865 DNAJC5Q9H3Z4 198 aa21.89■■□□□ 1.09
SVOPL-207ENST00000478865 SLC4A1APQ9BWU0 796 aaKnown RBP21.77■■□□□ 1.08
SVOPL-207ENST00000478865 NCAPD3P42695 1498 aa21.63■■□□□ 1.05
SVOPL-207ENST00000478865 CUX2O14529 1486 aa21.59■■□□□ 1.05
SVOPL-207ENST00000478865 ERCC6Q03468 1493 aa21.52■■□□□ 1.03
SVOPL-207ENST00000478865 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
SVOPL-207ENST00000478865 SMARCA2P51531 1590 aa21.43■■□□□ 1.02
SVOPL-207ENST00000478865 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.41■■□□□ 1.02
SVOPL-207ENST00000478865 HMGXB3Q12766 1538 aa21.4■■□□□ 1.02
SVOPL-207ENST00000478865 SMARCA4P51532 1647 aa21.37■■□□□ 1.01
SVOPL-207ENST00000478865 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■□□□□ 0.99
SVOPL-207ENST00000478865 NESP48681 1621 aa21.26■□□□□ 0.99
SVOPL-207ENST00000478865 SLC4A2P04920 1241 aa21.26■□□□□ 0.99
SVOPL-207ENST00000478865 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
SVOPL-207ENST00000478865 PEG3Q9GZU2 1588 aa21.2■□□□□ 0.98
SVOPL-207ENST00000478865 RNF39Q9H2S5 420 aa21.16■□□□□ 0.98
SVOPL-207ENST00000478865 LAMC3Q9Y6N6 1575 aa21.15■□□□□ 0.98
SVOPL-207ENST00000478865 FOXD4L1Q9NU39 408 aa21.14■□□□□ 0.97
SVOPL-207ENST00000478865 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
SVOPL-207ENST00000478865 PDS5BQ9NTI5 1447 aa21.07■□□□□ 0.96
SVOPL-207ENST00000478865 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
SVOPL-207ENST00000478865 U3KPZ7 1027 aaPredicted RBP21■□□□□ 0.95
SVOPL-207ENST00000478865 C1QBPQ07021 282 aaKnown RBP20.98■□□□□ 0.95
SVOPL-207ENST00000478865 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
SVOPL-207ENST00000478865 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
SVOPL-207ENST00000478865 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
SVOPL-207ENST00000478865 ZBTB22O15209 634 aa20.93■□□□□ 0.94
SVOPL-207ENST00000478865 MYCNP04198 464 aaPredicted RBP20.93■□□□□ 0.94
SVOPL-207ENST00000478865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.9■□□□□ 0.94
SVOPL-207ENST00000478865 HNRNPUL2Q1KMD3 747 aaKnown RBP20.9■□□□□ 0.94
SVOPL-207ENST00000478865 MRC2Q9UBG0 1479 aa20.85■□□□□ 0.93
SVOPL-207ENST00000478865 WDR62O43379 1518 aa20.79■□□□□ 0.92
SVOPL-207ENST00000478865 SAMD1Q6SPF0 538 aaPredicted RBP20.77■□□□□ 0.92
SVOPL-207ENST00000478865 TRIM41Q8WV44 630 aa20.76■□□□□ 0.91
SVOPL-207ENST00000478865 WIZO95785 1651 aa20.75■□□□□ 0.91
SVOPL-207ENST00000478865 APLP2Q06481 763 aa20.75■□□□□ 0.91
SVOPL-207ENST00000478865 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
SVOPL-207ENST00000478865 CEP164Q9UPV0 1460 aa20.73■□□□□ 0.91
SVOPL-207ENST00000478865 CACNB1Q02641 598 aaPredicted RBP20.68■□□□□ 0.9
SVOPL-207ENST00000478865 FANCD2Q9BXW9 1451 aa20.68■□□□□ 0.9
SVOPL-207ENST00000478865 CFTRP13569 1480 aa20.64■□□□□ 0.89
SVOPL-207ENST00000478865 OSCARQ8IYS5 282 aa20.61■□□□□ 0.89
SVOPL-207ENST00000478865 RSF1Q96T23 1441 aaPredicted RBP20.55■□□□□ 0.88
SVOPL-207ENST00000478865 TOP2AP11388 1531 aaKnown RBP20.52■□□□□ 0.87
SVOPL-207ENST00000478865 URB2Q14146 1524 aaKnown RBP20.49■□□□□ 0.87
SVOPL-207ENST00000478865 ATXN8OSP0DMR3 200 aa20.47■□□□□ 0.87
SVOPL-207ENST00000478865 CAPN15O75808 1086 aa20.41■□□□□ 0.86
SVOPL-207ENST00000478865 SPINK5Q9NQ38 1064 aaPredicted RBP20.39■□□□□ 0.85
SVOPL-207ENST00000478865 ZNF219Q9P2Y4 722 aaPredicted RBP20.38■□□□□ 0.85
SVOPL-207ENST00000478865 PRDM2Q13029 1718 aa20.36■□□□□ 0.85
SVOPL-207ENST00000478865 IFT140Q96RY7 1462 aa20.34■□□□□ 0.85
SVOPL-207ENST00000478865 CCDC88BA6NC98 1476 aa20.3■□□□□ 0.84
SVOPL-207ENST00000478865 ABCC8Q09428 1581 aa20.27■□□□□ 0.84
SVOPL-207ENST00000478865 ZNF608Q9ULD9 1512 aaPredicted RBP20.27■□□□□ 0.83
SVOPL-207ENST00000478865 RIMBP3CA6NJZ7 1639 aa20.26■□□□□ 0.83
SVOPL-207ENST00000478865 RIMBP3BA6NNM3 1639 aa20.26■□□□□ 0.83
SVOPL-207ENST00000478865 RIMBP3Q9UFD9 1639 aa20.26■□□□□ 0.83
SVOPL-207ENST00000478865 TOPBP1Q92547 1522 aa20.25■□□□□ 0.83
SVOPL-207ENST00000478865 TRHP20396 242 aaPredicted RBP20.24■□□□□ 0.83
SVOPL-207ENST00000478865 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms