RNA–Protein interactions for RNA: ENST00000478412.1

LRCH1-206, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 4

Gene LRCH1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-206ENST00000478412 AEBP2Q6ZN18 517 aaPredicted RBP16.48■□□□□ 0.23
LRCH1-206ENST00000478412 CHIC1Q5VXU3 224 aa15.59■□□□□ 0.09
LRCH1-206ENST00000478412 SENP3Q9H4L4 574 aaPredicted RBP14.05□□□□□ -0.16
LRCH1-206ENST00000478412 PHF23Q9BUL5 403 aaPredicted RBP13.84□□□□□ -0.19
LRCH1-206ENST00000478412 FOXD1Q16676 465 aa13.1□□□□□ -0.31
LRCH1-206ENST00000478412 PLPPR3Q6T4P5 718 aa12.42□□□□□ -0.42
LRCH1-206ENST00000478412 NISCHQ9Y2I1 1504 aa12.28□□□□□ -0.44
LRCH1-206ENST00000478412 MSH5O43196 834 aa12.28□□□□□ -0.44
LRCH1-206ENST00000478412 PIAS4Q8N2W9 510 aaPredicted RBP12.22□□□□□ -0.45
LRCH1-206ENST00000478412 PPP6R1Q9UPN7 881 aa12.21□□□□□ -0.45
LRCH1-206ENST00000478412 ADRA2BP18089 450 aa12.15□□□□□ -0.46
LRCH1-206ENST00000478412 POTEDQ86YR6 584 aa12.08□□□□□ -0.48
LRCH1-206ENST00000478412 ABCC9O60706 1549 aa11.23□□□□□ -0.61
LRCH1-206ENST00000478412 MAPK8IP2Q13387 824 aaPredicted RBP11.17□□□□□ -0.62
LRCH1-206ENST00000478412 CCDC180Q9P1Z9 1646 aa11.15□□□□□ -0.62
LRCH1-206ENST00000478412 DMRT2Q9Y5R5 561 aa11.14□□□□□ -0.63
LRCH1-206ENST00000478412 SCAF1Q9H7N4 1312 aaKnown RBP11.09□□□□□ -0.63
LRCH1-206ENST00000478412 PPP4R3CPQ6ZMV5 832 aa10.87□□□□□ -0.67
LRCH1-206ENST00000478412 HOXD11P31277 338 aaPredicted RBP10.72□□□□□ -0.69
LRCH1-206ENST00000478412 DNAJC5BQ9UF47 199 aa10.71□□□□□ -0.69
LRCH1-206ENST00000478412 RB1CC1Q8TDY2 1594 aa10.69□□□□□ -0.7
LRCH1-206ENST00000478412 CNKSR2Q8WXI2 1034 aa10.68□□□□□ -0.7
LRCH1-206ENST00000478412 DCAF8L1A6NGE4 600 aa10.63□□□□□ -0.71
LRCH1-206ENST00000478412 RNF216Q9NWF9 866 aaPredicted RBP10.61□□□□□ -0.71
LRCH1-206ENST00000478412 NACADO15069 1562 aa10.59□□□□□ -0.71
LRCH1-206ENST00000478412 CACNB1Q02641 598 aaPredicted RBP10.54□□□□□ -0.72
LRCH1-206ENST00000478412 RNF39Q9H2S5 420 aa10.49□□□□□ -0.73
LRCH1-206ENST00000478412 MYO15BQ96JP2 1530 aa10.45□□□□□ -0.74
LRCH1-206ENST00000478412 NCBP3Q53F19 620 aaKnown RBP10.42□□□□□ -0.74
LRCH1-206ENST00000478412 UNC13AQ9UPW8 1703 aa10.39□□□□□ -0.75
LRCH1-206ENST00000478412 PABPN1Q86U42 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
LRCH1-206ENST00000478412 BICRAQ9NZM4 1560 aa10.36□□□□□ -0.75
LRCH1-206ENST00000478412 SHROOM4Q9ULL8 1493 aa10.33□□□□□ -0.76
LRCH1-206ENST00000478412 DCAF8L2P0C7V8 631 aa10.31□□□□□ -0.76
LRCH1-206ENST00000478412 C1QBPQ07021 282 aaKnown RBP10.31□□□□□ -0.76
LRCH1-206ENST00000478412 NPM3O75607 178 aaKnown RBP10.3□□□□□ -0.76
LRCH1-206ENST00000478412 DCAF1Q9Y4B6 1507 aa10.22□□□□□ -0.77
LRCH1-206ENST00000478412 CECR2Q9BXF3 1484 aa10.18□□□□□ -0.78
LRCH1-206ENST00000478412 CC2D2AQ9P2K1 1620 aa10.18□□□□□ -0.78
LRCH1-206ENST00000478412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.16□□□□□ -0.78
LRCH1-206ENST00000478412 ZCCHC6Q5VYS8 1495 aaKnown RBP10.14□□□□□ -0.79
LRCH1-206ENST00000478412 EIF4G1Q04637 1599 aaKnown RBP10.13□□□□□ -0.79
LRCH1-206ENST00000478412 KCNA4P22459 653 aa10.05□□□□□ -0.8
LRCH1-206ENST00000478412 DNAJC5Q9H3Z4 198 aa10.05□□□□□ -0.8
LRCH1-206ENST00000478412 SCRIBQ14160 1630 aa10.03□□□□□ -0.8
LRCH1-206ENST00000478412 U3KPZ7 1027 aaPredicted RBP9.99□□□□□ -0.81
LRCH1-206ENST00000478412 CUX2O14529 1486 aa9.87□□□□□ -0.83
LRCH1-206ENST00000478412 SLC4A2P04920 1241 aa9.86□□□□□ -0.83
LRCH1-206ENST00000478412 SPINK5Q9NQ38 1064 aaPredicted RBP9.84□□□□□ -0.83
LRCH1-206ENST00000478412 CAPN15O75808 1086 aa9.8□□□□□ -0.84
LRCH1-206ENST00000478412 DSG3P32926 999 aa9.79□□□□□ -0.84
LRCH1-206ENST00000478412 NCAPD3P42695 1498 aa9.78□□□□□ -0.84
LRCH1-206ENST00000478412 ERCC6Q03468 1493 aa9.73□□□□□ -0.85
LRCH1-206ENST00000478412 HMGXB3Q12766 1538 aa9.69□□□□□ -0.86
LRCH1-206ENST00000478412 ATAD2BQ9ULI0 1458 aa9.68□□□□□ -0.86
LRCH1-206ENST00000478412 SMARCA2P51531 1590 aa9.67□□□□□ -0.86
LRCH1-206ENST00000478412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.66□□□□□ -0.86
LRCH1-206ENST00000478412 APLP2Q06481 763 aa9.66□□□□□ -0.86
LRCH1-206ENST00000478412 HNRNPUL2Q1KMD3 747 aaKnown RBP9.66□□□□□ -0.86
LRCH1-206ENST00000478412 ZNF219Q9P2Y4 722 aaPredicted RBP9.64□□□□□ -0.87
LRCH1-206ENST00000478412 TRHP20396 242 aaPredicted RBP9.63□□□□□ -0.87
LRCH1-206ENST00000478412 SMARCA4P51532 1647 aa9.61□□□□□ -0.87
LRCH1-206ENST00000478412 SAMD1Q6SPF0 538 aaPredicted RBP9.61□□□□□ -0.87
LRCH1-206ENST00000478412 THOC2Q8NI27 1593 aaKnown RBP9.59□□□□□ -0.87
LRCH1-206ENST00000478412 PEG3Q9GZU2 1588 aa9.59□□□□□ -0.87
LRCH1-206ENST00000478412 LAMC3Q9Y6N6 1575 aa9.58□□□□□ -0.88
LRCH1-206ENST00000478412 NESP48681 1621 aa9.58□□□□□ -0.88
LRCH1-206ENST00000478412 ABCB7O75027 752 aa9.58□□□□□ -0.88
LRCH1-206ENST00000478412 BAZ1AQ9NRL2 1556 aaPredicted RBP9.56□□□□□ -0.88
LRCH1-206ENST00000478412 BAZ1BQ9UIG0 1483 aaKnown RBP9.56□□□□□ -0.88
LRCH1-206ENST00000478412 MYCNP04198 464 aaPredicted RBP9.53□□□□□ -0.88
LRCH1-206ENST00000478412 PDS5BQ9NTI5 1447 aa9.53□□□□□ -0.88
LRCH1-206ENST00000478412 KIF21AQ7Z4S6 1674 aa9.48□□□□□ -0.89
LRCH1-206ENST00000478412 SLC4A1APQ9BWU0 796 aaKnown RBP9.46□□□□□ -0.9
LRCH1-206ENST00000478412 POTEHQ6S545 545 aa9.45□□□□□ -0.9
LRCH1-206ENST00000478412 CADPSQ9ULU8 1353 aa9.44□□□□□ -0.9
LRCH1-206ENST00000478412 WDR62O43379 1518 aa9.44□□□□□ -0.9
LRCH1-206ENST00000478412 MRC2Q9UBG0 1479 aa9.43□□□□□ -0.9
LRCH1-206ENST00000478412 MROH2BQ7Z745 1585 aa9.41□□□□□ -0.9
LRCH1-206ENST00000478412 TRIM41Q8WV44 630 aa9.41□□□□□ -0.9
LRCH1-206ENST00000478412 FOXD4L1Q9NU39 408 aa9.4□□□□□ -0.9
LRCH1-206ENST00000478412 POLA2Q14181 598 aa9.37□□□□□ -0.91
LRCH1-206ENST00000478412 CEP164Q9UPV0 1460 aa9.34□□□□□ -0.91
LRCH1-206ENST00000478412 OSCARQ8IYS5 282 aa9.33□□□□□ -0.92
LRCH1-206ENST00000478412 RBM42Q9BTD8 480 aaKnown RBP9.33□□□□□ -0.92
LRCH1-206ENST00000478412 ATF5Q9Y2D1 282 aaPredicted RBP9.31□□□□□ -0.92
LRCH1-206ENST00000478412 CFTRP13569 1480 aa9.31□□□□□ -0.92
LRCH1-206ENST00000478412 FANCD2Q9BXW9 1451 aa9.31□□□□□ -0.92
LRCH1-206ENST00000478412 WIZO95785 1651 aa9.27□□□□□ -0.93
LRCH1-206ENST00000478412 ZBTB22O15209 634 aa9.27□□□□□ -0.93
LRCH1-206ENST00000478412 URB2Q14146 1524 aaKnown RBP9.24□□□□□ -0.93
LRCH1-206ENST00000478412 RIMBP3CA6NJZ7 1639 aa9.21□□□□□ -0.93
LRCH1-206ENST00000478412 RIMBP3BA6NNM3 1639 aa9.21□□□□□ -0.93
LRCH1-206ENST00000478412 RIMBP3Q9UFD9 1639 aa9.21□□□□□ -0.93
LRCH1-206ENST00000478412 IFT140Q96RY7 1462 aa9.2□□□□□ -0.94
LRCH1-206ENST00000478412 TOP2AP11388 1531 aaKnown RBP9.2□□□□□ -0.94
LRCH1-206ENST00000478412 ZBTB12Q9Y330 459 aaPredicted RBP9.19□□□□□ -0.94
LRCH1-206ENST00000478412 PRDM2Q13029 1718 aa9.19□□□□□ -0.94
LRCH1-206ENST00000478412 ARHGEF11O15085 1522 aa9.18□□□□□ -0.94
LRCH1-206ENST00000478412 RSF1Q96T23 1441 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms