RNA–Protein interactions for RNA: ENST00000477277.5

CDK8-203, Transcript of cyclin dependent kinase 8, humanhuman

TSL 3

Gene CDK8, Length 1,770 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK8-203ENST00000477277 AEBP2Q6ZN18 517 aaPredicted RBP18.4■□□□□ 0.54
CDK8-203ENST00000477277 CHIC1Q5VXU3 224 aa18.33■□□□□ 0.53
CDK8-203ENST00000477277 PHF23Q9BUL5 403 aaPredicted RBP16.23■□□□□ 0.19
CDK8-203ENST00000477277 POTEDQ86YR6 584 aa15.95■□□□□ 0.14
CDK8-203ENST00000477277 SENP3Q9H4L4 574 aaPredicted RBP15.44■□□□□ 0.06
CDK8-203ENST00000477277 NISCHQ9Y2I1 1504 aa15.28■□□□□ 0.04
CDK8-203ENST00000477277 PLPPR3Q6T4P5 718 aa15.04■□□□□ -0
CDK8-203ENST00000477277 FOXD1Q16676 465 aa14.33□□□□□ -0.12
CDK8-203ENST00000477277 PPP6R1Q9UPN7 881 aa14.18□□□□□ -0.14
CDK8-203ENST00000477277 ADRA2BP18089 450 aa14.17□□□□□ -0.14
CDK8-203ENST00000477277 ABCC9O60706 1549 aa14.1□□□□□ -0.15
CDK8-203ENST00000477277 CCDC180Q9P1Z9 1646 aa14.01□□□□□ -0.17
CDK8-203ENST00000477277 MSH5O43196 834 aa13.74□□□□□ -0.21
CDK8-203ENST00000477277 PIAS4Q8N2W9 510 aaPredicted RBP13.58□□□□□ -0.24
CDK8-203ENST00000477277 KCNA4P22459 653 aa13.56□□□□□ -0.24
CDK8-203ENST00000477277 RB1CC1Q8TDY2 1594 aa13.4□□□□□ -0.26
CDK8-203ENST00000477277 DNAJC5BQ9UF47 199 aa13.4□□□□□ -0.26
CDK8-203ENST00000477277 PPP4R3CPQ6ZMV5 832 aa13.32□□□□□ -0.28
CDK8-203ENST00000477277 NACADO15069 1562 aa13.23□□□□□ -0.29
CDK8-203ENST00000477277 UNC13AQ9UPW8 1703 aa13.16□□□□□ -0.3
CDK8-203ENST00000477277 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
CDK8-203ENST00000477277 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
CDK8-203ENST00000477277 BICRAQ9NZM4 1560 aa13□□□□□ -0.33
CDK8-203ENST00000477277 MYO15BQ96JP2 1530 aa12.98□□□□□ -0.33
CDK8-203ENST00000477277 PABPN1Q86U42 306 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDK8-203ENST00000477277 NPM3O75607 178 aaKnown RBP12.95□□□□□ -0.34
CDK8-203ENST00000477277 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
CDK8-203ENST00000477277 SHROOM4Q9ULL8 1493 aa12.9□□□□□ -0.34
CDK8-203ENST00000477277 CNKSR2Q8WXI2 1034 aa12.84□□□□□ -0.35
CDK8-203ENST00000477277 SCAF1Q9H7N4 1312 aaKnown RBP12.82□□□□□ -0.36
CDK8-203ENST00000477277 DCAF8L2P0C7V8 631 aa12.81□□□□□ -0.36
CDK8-203ENST00000477277 CC2D2AQ9P2K1 1620 aa12.8□□□□□ -0.36
CDK8-203ENST00000477277 CSRNP3Q8WYN3 585 aa12.79□□□□□ -0.36
CDK8-203ENST00000477277 CECR2Q9BXF3 1484 aa12.77□□□□□ -0.36
CDK8-203ENST00000477277 MAPK8IP2Q13387 824 aaPredicted RBP12.73□□□□□ -0.37
CDK8-203ENST00000477277 EIF4G1Q04637 1599 aaKnown RBP12.71□□□□□ -0.38
CDK8-203ENST00000477277 CACNB1Q02641 598 aaPredicted RBP12.7□□□□□ -0.38
CDK8-203ENST00000477277 DCAF1Q9Y4B6 1507 aa12.68□□□□□ -0.38
CDK8-203ENST00000477277 ZCCHC6Q5VYS8 1495 aaKnown RBP12.63□□□□□ -0.39
CDK8-203ENST00000477277 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
CDK8-203ENST00000477277 SCRIBQ14160 1630 aa12.6□□□□□ -0.39
CDK8-203ENST00000477277 ZBTB22O15209 634 aa12.54□□□□□ -0.4
CDK8-203ENST00000477277 RNF216Q9NWF9 866 aaPredicted RBP12.48□□□□□ -0.41
CDK8-203ENST00000477277 DMRT2Q9Y5R5 561 aa12.42□□□□□ -0.42
CDK8-203ENST00000477277 CUX2O14529 1486 aa12.39□□□□□ -0.43
CDK8-203ENST00000477277 HOXD11P31277 338 aaPredicted RBP12.35□□□□□ -0.43
CDK8-203ENST00000477277 FOXD4L1Q9NU39 408 aa12.3□□□□□ -0.44
CDK8-203ENST00000477277 ERCC6Q03468 1493 aa12.23□□□□□ -0.45
CDK8-203ENST00000477277 POTEHQ6S545 545 aa12.23□□□□□ -0.45
CDK8-203ENST00000477277 NCAPD3P42695 1498 aa12.16□□□□□ -0.46
CDK8-203ENST00000477277 SLC4A2P04920 1241 aa12.15□□□□□ -0.46
CDK8-203ENST00000477277 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
CDK8-203ENST00000477277 THOC2Q8NI27 1593 aaKnown RBP12.1□□□□□ -0.47
CDK8-203ENST00000477277 SMARCA2P51531 1590 aa12.08□□□□□ -0.48
CDK8-203ENST00000477277 ATAD2BQ9ULI0 1458 aa12.06□□□□□ -0.48
CDK8-203ENST00000477277 SMARCA4P51532 1647 aa12.04□□□□□ -0.48
CDK8-203ENST00000477277 NESP48681 1621 aa12.02□□□□□ -0.49
CDK8-203ENST00000477277 LAMC3Q9Y6N6 1575 aa12.01□□□□□ -0.49
CDK8-203ENST00000477277 KIF21AQ7Z4S6 1674 aa11.99□□□□□ -0.49
CDK8-203ENST00000477277 PEG3Q9GZU2 1588 aa11.96□□□□□ -0.5
CDK8-203ENST00000477277 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
CDK8-203ENST00000477277 BAZ1AQ9NRL2 1556 aaPredicted RBP11.92□□□□□ -0.5
CDK8-203ENST00000477277 MYCNP04198 464 aaPredicted RBP11.9□□□□□ -0.5
CDK8-203ENST00000477277 PDS5BQ9NTI5 1447 aa11.87□□□□□ -0.51
CDK8-203ENST00000477277 TRIM41Q8WV44 630 aa11.86□□□□□ -0.51
CDK8-203ENST00000477277 WDR62O43379 1518 aa11.84□□□□□ -0.51
CDK8-203ENST00000477277 ATXN8OSP0DMR3 200 aa11.82□□□□□ -0.52
CDK8-203ENST00000477277 MRC2Q9UBG0 1479 aa11.82□□□□□ -0.52
CDK8-203ENST00000477277 DCAF8L1A6NGE4 600 aa11.8□□□□□ -0.52
CDK8-203ENST00000477277 CADPSQ9ULU8 1353 aa11.74□□□□□ -0.53
CDK8-203ENST00000477277 MROH2BQ7Z745 1585 aa11.73□□□□□ -0.53
CDK8-203ENST00000477277 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
CDK8-203ENST00000477277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.7□□□□□ -0.54
CDK8-203ENST00000477277 RIMBP3CA6NJZ7 1639 aa11.64□□□□□ -0.55
CDK8-203ENST00000477277 RIMBP3BA6NNM3 1639 aa11.64□□□□□ -0.55
CDK8-203ENST00000477277 RIMBP3Q9UFD9 1639 aa11.64□□□□□ -0.55
CDK8-203ENST00000477277 ATF5Q9Y2D1 282 aaPredicted RBP11.64□□□□□ -0.55
CDK8-203ENST00000477277 U3KPZ7 1027 aaPredicted RBP11.64□□□□□ -0.55
CDK8-203ENST00000477277 FANCD2Q9BXW9 1451 aa11.63□□□□□ -0.55
CDK8-203ENST00000477277 PRDM2Q13029 1718 aa11.63□□□□□ -0.55
CDK8-203ENST00000477277 OSCARQ8IYS5 282 aa11.62□□□□□ -0.55
CDK8-203ENST00000477277 WIZO95785 1651 aa11.62□□□□□ -0.55
CDK8-203ENST00000477277 CFTRP13569 1480 aa11.57□□□□□ -0.56
CDK8-203ENST00000477277 URB2Q14146 1524 aaKnown RBP11.55□□□□□ -0.56
CDK8-203ENST00000477277 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
CDK8-203ENST00000477277 ARHGEF11O15085 1522 aa11.54□□□□□ -0.56
CDK8-203ENST00000477277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.54□□□□□ -0.56
CDK8-203ENST00000477277 HNRNPUL2Q1KMD3 747 aaKnown RBP11.54□□□□□ -0.56
CDK8-203ENST00000477277 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
CDK8-203ENST00000477277 IFT140Q96RY7 1462 aa11.48□□□□□ -0.57
CDK8-203ENST00000477277 FKBP8Q14318 412 aa11.48□□□□□ -0.57
CDK8-203ENST00000477277 EIF4G3O43432 1585 aaKnown RBP11.46□□□□□ -0.57
CDK8-203ENST00000477277 CHD1O14646 1710 aa11.46□□□□□ -0.58
CDK8-203ENST00000477277 RNF39Q9H2S5 420 aa11.45□□□□□ -0.58
CDK8-203ENST00000477277 ZNF608Q9ULD9 1512 aaPredicted RBP11.43□□□□□ -0.58
CDK8-203ENST00000477277 RSF1Q96T23 1441 aaPredicted RBP11.39□□□□□ -0.59
CDK8-203ENST00000477277 ARAP1Q96P48 1450 aa11.39□□□□□ -0.59
CDK8-203ENST00000477277 TOPBP1Q92547 1522 aa11.39□□□□□ -0.59
CDK8-203ENST00000477277 ABCC8Q09428 1581 aa11.39□□□□□ -0.59
CDK8-203ENST00000477277 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms