RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.31
CNTNAP3B-205ENST00000476961 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
CNTNAP3B-205ENST00000476961 MYT1Q01538 1121 aa14.94□□□□□ -0.02
CNTNAP3B-205ENST00000476961 CCDC180Q9P1Z9 1646 aa14.78□□□□□ -0.04
CNTNAP3B-205ENST00000476961 TTBK1Q5TCY1 1321 aaPredicted RBP14.45□□□□□ -0.1
CNTNAP3B-205ENST00000476961 ZCCHC6Q5VYS8 1495 aaKnown RBP14.24□□□□□ -0.13
CNTNAP3B-205ENST00000476961 PRKCSHP14314 528 aaPredicted RBP14.18□□□□□ -0.14
CNTNAP3B-205ENST00000476961 ABCC9O60706 1549 aa14.08□□□□□ -0.15
CNTNAP3B-205ENST00000476961 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
CNTNAP3B-205ENST00000476961 DCAF1Q9Y4B6 1507 aa14.01□□□□□ -0.17
CNTNAP3B-205ENST00000476961 SLC24A1O60721 1099 aa13.92□□□□□ -0.18
CNTNAP3B-205ENST00000476961 APLP2Q06481 763 aa13.89□□□□□ -0.19
CNTNAP3B-205ENST00000476961 MYO15BQ96JP2 1530 aa13.87□□□□□ -0.19
CNTNAP3B-205ENST00000476961 ERICH6Q7L0X2 663 aa13.84□□□□□ -0.19
CNTNAP3B-205ENST00000476961 SHROOM4Q9ULL8 1493 aa13.8□□□□□ -0.2
CNTNAP3B-205ENST00000476961 NACADO15069 1562 aa13.8□□□□□ -0.2
CNTNAP3B-205ENST00000476961 HRCP23327 699 aa13.78□□□□□ -0.2
CNTNAP3B-205ENST00000476961 BCL11AQ9H165 835 aa13.71□□□□□ -0.22
CNTNAP3B-205ENST00000476961 RB1CC1Q8TDY2 1594 aa13.69□□□□□ -0.22
CNTNAP3B-205ENST00000476961 SCAF1Q9H7N4 1312 aaKnown RBP13.66□□□□□ -0.22
CNTNAP3B-205ENST00000476961 SCRIBQ14160 1630 aa13.61□□□□□ -0.23
CNTNAP3B-205ENST00000476961 FAM9AQ8IZU1 332 aaPredicted RBP13.54□□□□□ -0.24
CNTNAP3B-205ENST00000476961 UNC13AQ9UPW8 1703 aa13.41□□□□□ -0.26
CNTNAP3B-205ENST00000476961 DAXXQ9UER7 740 aaPredicted RBP13.32□□□□□ -0.28
CNTNAP3B-205ENST00000476961 PPARGC1BQ86YN6 1023 aaKnown RBP13.32□□□□□ -0.28
CNTNAP3B-205ENST00000476961 BICRAQ9NZM4 1560 aa13.31□□□□□ -0.28
CNTNAP3B-205ENST00000476961 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
CNTNAP3B-205ENST00000476961 SUPT5HO00267 1087 aaKnown RBP13.25□□□□□ -0.29
CNTNAP3B-205ENST00000476961 CECR2Q9BXF3 1484 aa13.21□□□□□ -0.29
CNTNAP3B-205ENST00000476961 CENPBP07199 599 aaPredicted RBP13.18□□□□□ -0.3
CNTNAP3B-205ENST00000476961 RSF1Q96T23 1441 aaPredicted RBP13.15□□□□□ -0.3
CNTNAP3B-205ENST00000476961 MROH2BQ7Z745 1585 aa13.11□□□□□ -0.31
CNTNAP3B-205ENST00000476961 BAZ1AQ9NRL2 1556 aaPredicted RBP13.09□□□□□ -0.31
CNTNAP3B-205ENST00000476961 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
CNTNAP3B-205ENST00000476961 EIF5BO60841 1220 aaKnown RBP13.03□□□□□ -0.32
CNTNAP3B-205ENST00000476961 WIZO95785 1651 aa12.98□□□□□ -0.33
CNTNAP3B-205ENST00000476961 ACIN1Q9UKV3 1341 aaKnown RBP12.97□□□□□ -0.33
CNTNAP3B-205ENST00000476961 ANP32EQ9BTT0 268 aa12.92□□□□□ -0.34
CNTNAP3B-205ENST00000476961 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.34
CNTNAP3B-205ENST00000476961 PEG3Q9GZU2 1588 aa12.89□□□□□ -0.35
CNTNAP3B-205ENST00000476961 GTF3C3Q9Y5Q9 886 aa12.88□□□□□ -0.35
CNTNAP3B-205ENST00000476961 ATAD2BQ9ULI0 1458 aa12.86□□□□□ -0.35
CNTNAP3B-205ENST00000476961 TOP2AP11388 1531 aaKnown RBP12.85□□□□□ -0.35
CNTNAP3B-205ENST00000476961 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
CNTNAP3B-205ENST00000476961 SMARCA2P51531 1590 aa12.82□□□□□ -0.36
CNTNAP3B-205ENST00000476961 PCGF6Q9BYE7 350 aa12.79□□□□□ -0.36
CNTNAP3B-205ENST00000476961 CSRNP3Q8WYN3 585 aa12.78□□□□□ -0.36
CNTNAP3B-205ENST00000476961 BAZ1BQ9UIG0 1483 aaKnown RBP12.77□□□□□ -0.37
CNTNAP3B-205ENST00000476961 PLEKHG5O94827 1062 aa12.76□□□□□ -0.37
CNTNAP3B-205ENST00000476961 UBE2Q2Q8WVN8 375 aa12.76□□□□□ -0.37
CNTNAP3B-205ENST00000476961 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
CNTNAP3B-205ENST00000476961 CCDC88BA6NC98 1476 aa12.73□□□□□ -0.37
CNTNAP3B-205ENST00000476961 CC2D2AQ9P2K1 1620 aa12.73□□□□□ -0.37
CNTNAP3B-205ENST00000476961 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
CNTNAP3B-205ENST00000476961 ANO8Q9HCE9 1232 aaPredicted RBP12.69□□□□□ -0.38
CNTNAP3B-205ENST00000476961 CHIC1Q5VXU3 224 aa12.65□□□□□ -0.38
CNTNAP3B-205ENST00000476961 ZEB1P37275 1124 aaPredicted RBP12.63□□□□□ -0.39
CNTNAP3B-205ENST00000476961 PODXL2Q9NZ53 605 aa12.55□□□□□ -0.4
CNTNAP3B-205ENST00000476961 DNAJC5BQ9UF47 199 aa12.52□□□□□ -0.4
CNTNAP3B-205ENST00000476961 PKNOX2Q96KN3 472 aa12.46□□□□□ -0.42
CNTNAP3B-205ENST00000476961 CFTRP13569 1480 aa12.46□□□□□ -0.42
CNTNAP3B-205ENST00000476961 TRIM41Q8WV44 630 aa12.44□□□□□ -0.42
CNTNAP3B-205ENST00000476961 ABCC8Q09428 1581 aa12.44□□□□□ -0.42
CNTNAP3B-205ENST00000476961 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
CNTNAP3B-205ENST00000476961 SALL2Q9Y467 1007 aaPredicted RBP12.37□□□□□ -0.43
CNTNAP3B-205ENST00000476961 WRNQ14191 1432 aaPredicted RBP eCLIP12.36□□□□□ -0.43
CNTNAP3B-205ENST00000476961 NESP48681 1621 aa12.35□□□□□ -0.43
CNTNAP3B-205ENST00000476961 PRDM2Q13029 1718 aa12.33□□□□□ -0.44
CNTNAP3B-205ENST00000476961 SYNJ1O43426 1573 aa12.32□□□□□ -0.44
CNTNAP3B-205ENST00000476961 LAMC3Q9Y6N6 1575 aa12.31□□□□□ -0.44
CNTNAP3B-205ENST00000476961 NCBP3Q53F19 620 aaKnown RBP12.29□□□□□ -0.44
CNTNAP3B-205ENST00000476961 TSHZ2Q9NRE2 1034 aa12.29□□□□□ -0.44
CNTNAP3B-205ENST00000476961 CCDC136Q96JN2 1154 aa12.29□□□□□ -0.44
CNTNAP3B-205ENST00000476961 FANCD2Q9BXW9 1451 aa12.28□□□□□ -0.44
CNTNAP3B-205ENST00000476961 CUX1P39880 1505 aa12.26□□□□□ -0.45
CNTNAP3B-205ENST00000476961 TOP2BQ02880 1626 aa12.26□□□□□ -0.45
CNTNAP3B-205ENST00000476961 ERICH6BQ5W0A0 696 aa12.25□□□□□ -0.45
CNTNAP3B-205ENST00000476961 BIVM-ERCC5R4GMW8 1640 aa12.24□□□□□ -0.45
CNTNAP3B-205ENST00000476961 PDS5BQ9NTI5 1447 aa12.22□□□□□ -0.45
CNTNAP3B-205ENST00000476961 SOGA1O94964 1423 aa12.21□□□□□ -0.46
CNTNAP3B-205ENST00000476961 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.46
CNTNAP3B-205ENST00000476961 LOC105371045A0A1W2PR82 267 aa12.18□□□□□ -0.46
CNTNAP3B-205ENST00000476961 RUSC2Q8N2Y8 1516 aa12.17□□□□□ -0.46
CNTNAP3B-205ENST00000476961 KIF21AQ7Z4S6 1674 aa12.17□□□□□ -0.46
CNTNAP3B-205ENST00000476961 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
CNTNAP3B-205ENST00000476961 TRIM26Q12899 539 aaPredicted RBP12.16□□□□□ -0.46
CNTNAP3B-205ENST00000476961 URB2Q14146 1524 aaKnown RBP12.15□□□□□ -0.46
CNTNAP3B-205ENST00000476961 TOPBP1Q92547 1522 aa12.15□□□□□ -0.46
CNTNAP3B-205ENST00000476961 DNMBPQ6XZF7 1577 aa12.15□□□□□ -0.46
CNTNAP3B-205ENST00000476961 FGD5Q6ZNL6 1462 aa12.13□□□□□ -0.47
CNTNAP3B-205ENST00000476961 EEA1Q15075 1411 aa12.13□□□□□ -0.47
CNTNAP3B-205ENST00000476961 NEFLP07196 543 aa12.12□□□□□ -0.47
CNTNAP3B-205ENST00000476961 MYT1LQ9UL68 1186 aa12.11□□□□□ -0.47
CNTNAP3B-205ENST00000476961 ARXQ96QS3 562 aa12.1□□□□□ -0.47
CNTNAP3B-205ENST00000476961 PDIA4P13667 645 aaKnown RBP12.09□□□□□ -0.47
CNTNAP3B-205ENST00000476961 POLA1P09884 1462 aaPredicted RBP12.09□□□□□ -0.47
CNTNAP3B-205ENST00000476961 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.48
CNTNAP3B-205ENST00000476961 PDE4CQ08493 712 aa12.07□□□□□ -0.48
CNTNAP3B-205ENST00000476961 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
CNTNAP3B-205ENST00000476961 DIEXFQ68CQ4 756 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms