RNA–Protein interactions for RNA: ENST00000476958.5

GTDC1-214, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 4

Gene GTDC1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-214ENST00000476958 AEBP2Q6ZN18 517 aaPredicted RBP18.97■□□□□ 0.63
GTDC1-214ENST00000476958 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
GTDC1-214ENST00000476958 SENP3Q9H4L4 574 aaPredicted RBP16.31■□□□□ 0.2
GTDC1-214ENST00000476958 PHF23Q9BUL5 403 aaPredicted RBP16.03■□□□□ 0.16
GTDC1-214ENST00000476958 FOXD1Q16676 465 aa15.11■□□□□ 0.01
GTDC1-214ENST00000476958 PLPPR3Q6T4P5 718 aa14.52□□□□□ -0.09
GTDC1-214ENST00000476958 MSH5O43196 834 aa14.24□□□□□ -0.13
GTDC1-214ENST00000476958 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
GTDC1-214ENST00000476958 PPP6R1Q9UPN7 881 aa14.08□□□□□ -0.16
GTDC1-214ENST00000476958 ADRA2BP18089 450 aa14.04□□□□□ -0.16
GTDC1-214ENST00000476958 POTEDQ86YR6 584 aa13.77□□□□□ -0.21
GTDC1-214ENST00000476958 DNAJC5BQ9UF47 199 aa13.17□□□□□ -0.3
GTDC1-214ENST00000476958 SCAF1Q9H7N4 1312 aaKnown RBP13.01□□□□□ -0.33
GTDC1-214ENST00000476958 ABCC9O60706 1549 aa13□□□□□ -0.33
GTDC1-214ENST00000476958 NISCHQ9Y2I1 1504 aa12.97□□□□□ -0.33
GTDC1-214ENST00000476958 DMRT2Q9Y5R5 561 aa12.91□□□□□ -0.34
GTDC1-214ENST00000476958 MAPK8IP2Q13387 824 aaPredicted RBP12.87□□□□□ -0.35
GTDC1-214ENST00000476958 DNAJC5Q9H3Z4 198 aa12.7□□□□□ -0.38
GTDC1-214ENST00000476958 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
GTDC1-214ENST00000476958 CNKSR2Q8WXI2 1034 aa12.48□□□□□ -0.41
GTDC1-214ENST00000476958 HOXD11P31277 338 aaPredicted RBP12.46□□□□□ -0.41
GTDC1-214ENST00000476958 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
GTDC1-214ENST00000476958 DCAF8L1A6NGE4 600 aa12.31□□□□□ -0.44
GTDC1-214ENST00000476958 NCBP3Q53F19 620 aaKnown RBP12.28□□□□□ -0.44
GTDC1-214ENST00000476958 CACNB1Q02641 598 aaPredicted RBP12.15□□□□□ -0.46
GTDC1-214ENST00000476958 RNF39Q9H2S5 420 aa12.1□□□□□ -0.47
GTDC1-214ENST00000476958 NPM3O75607 178 aaKnown RBP12□□□□□ -0.49
GTDC1-214ENST00000476958 CCDC180Q9P1Z9 1646 aa12□□□□□ -0.49
GTDC1-214ENST00000476958 PABPN1Q86U42 306 aaKnown RBP eCLIP11.99□□□□□ -0.49
GTDC1-214ENST00000476958 C1QBPQ07021 282 aaKnown RBP11.98□□□□□ -0.49
GTDC1-214ENST00000476958 RB1CC1Q8TDY2 1594 aa11.88□□□□□ -0.51
GTDC1-214ENST00000476958 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.84□□□□□ -0.51
GTDC1-214ENST00000476958 CECR2Q9BXF3 1484 aa11.78□□□□□ -0.52
GTDC1-214ENST00000476958 KCNA4P22459 653 aa11.76□□□□□ -0.53
GTDC1-214ENST00000476958 UNC13AQ9UPW8 1703 aa11.74□□□□□ -0.53
GTDC1-214ENST00000476958 TRIM41Q8WV44 630 aa11.72□□□□□ -0.53
GTDC1-214ENST00000476958 CC2D2AQ9P2K1 1620 aa11.69□□□□□ -0.54
GTDC1-214ENST00000476958 BICRAQ9NZM4 1560 aa11.69□□□□□ -0.54
GTDC1-214ENST00000476958 NACADO15069 1562 aa11.58□□□□□ -0.56
GTDC1-214ENST00000476958 U3KPZ7 1027 aaPredicted RBP11.57□□□□□ -0.56
GTDC1-214ENST00000476958 CUX2O14529 1486 aa11.52□□□□□ -0.56
GTDC1-214ENST00000476958 SLC4A2P04920 1241 aa11.44□□□□□ -0.58
GTDC1-214ENST00000476958 EIF4G1Q04637 1599 aaKnown RBP11.41□□□□□ -0.58
GTDC1-214ENST00000476958 APLP2Q06481 763 aa11.4□□□□□ -0.58
GTDC1-214ENST00000476958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.37□□□□□ -0.59
GTDC1-214ENST00000476958 CAPN15O75808 1086 aa11.37□□□□□ -0.59
GTDC1-214ENST00000476958 HNRNPUL2Q1KMD3 747 aaKnown RBP11.37□□□□□ -0.59
GTDC1-214ENST00000476958 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
GTDC1-214ENST00000476958 SPINK5Q9NQ38 1064 aaPredicted RBP11.35□□□□□ -0.59
GTDC1-214ENST00000476958 DSG3P32926 999 aa11.31□□□□□ -0.6
GTDC1-214ENST00000476958 SAMD1Q6SPF0 538 aaPredicted RBP11.28□□□□□ -0.6
GTDC1-214ENST00000476958 ZNF219Q9P2Y4 722 aaPredicted RBP11.26□□□□□ -0.61
GTDC1-214ENST00000476958 SHROOM4Q9ULL8 1493 aa11.25□□□□□ -0.61
GTDC1-214ENST00000476958 ERCC6Q03468 1493 aa11.21□□□□□ -0.61
GTDC1-214ENST00000476958 TRHP20396 242 aaPredicted RBP11.18□□□□□ -0.62
GTDC1-214ENST00000476958 MYCNP04198 464 aaPredicted RBP11.17□□□□□ -0.62
GTDC1-214ENST00000476958 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
GTDC1-214ENST00000476958 MYO15BQ96JP2 1530 aa11.08□□□□□ -0.64
GTDC1-214ENST00000476958 ABCB7O75027 752 aa11.07□□□□□ -0.64
GTDC1-214ENST00000476958 ILDR1Q86SU0 546 aaPredicted RBP11.05□□□□□ -0.64
GTDC1-214ENST00000476958 FOXD4L1Q9NU39 408 aa11.05□□□□□ -0.64
GTDC1-214ENST00000476958 THOC2Q8NI27 1593 aaKnown RBP10.97□□□□□ -0.65
GTDC1-214ENST00000476958 SCRIBQ14160 1630 aa10.95□□□□□ -0.66
GTDC1-214ENST00000476958 NESP48681 1621 aa10.94□□□□□ -0.66
GTDC1-214ENST00000476958 RBM42Q9BTD8 480 aaKnown RBP10.9□□□□□ -0.66
GTDC1-214ENST00000476958 POLA2Q14181 598 aa10.89□□□□□ -0.67
GTDC1-214ENST00000476958 RIMBP3CA6NJZ7 1639 aa10.87□□□□□ -0.67
GTDC1-214ENST00000476958 RIMBP3BA6NNM3 1639 aa10.87□□□□□ -0.67
GTDC1-214ENST00000476958 RIMBP3Q9UFD9 1639 aa10.87□□□□□ -0.67
GTDC1-214ENST00000476958 OSCARQ8IYS5 282 aa10.87□□□□□ -0.67
GTDC1-214ENST00000476958 BAZ1AQ9NRL2 1556 aaPredicted RBP10.85□□□□□ -0.67
GTDC1-214ENST00000476958 POTEHQ6S545 545 aa10.82□□□□□ -0.68
GTDC1-214ENST00000476958 ZBTB12Q9Y330 459 aaPredicted RBP10.81□□□□□ -0.68
GTDC1-214ENST00000476958 SMARCA2P51531 1590 aa10.78□□□□□ -0.68
GTDC1-214ENST00000476958 ZBTB22O15209 634 aa10.78□□□□□ -0.68
GTDC1-214ENST00000476958 ATF5Q9Y2D1 282 aaPredicted RBP10.77□□□□□ -0.69
GTDC1-214ENST00000476958 ATXN8OSP0DMR3 200 aa10.76□□□□□ -0.69
GTDC1-214ENST00000476958 KIF21AQ7Z4S6 1674 aa10.74□□□□□ -0.69
GTDC1-214ENST00000476958 NCAPD3P42695 1498 aa10.74□□□□□ -0.69
GTDC1-214ENST00000476958 CYB5RLQ6IPT4 315 aa10.73□□□□□ -0.69
GTDC1-214ENST00000476958 ARHGEF11O15085 1522 aa10.72□□□□□ -0.69
GTDC1-214ENST00000476958 AKT1S1Q96B36 256 aa10.61□□□□□ -0.71
GTDC1-214ENST00000476958 LAMC3Q9Y6N6 1575 aa10.6□□□□□ -0.71
GTDC1-214ENST00000476958 DCAF1Q9Y4B6 1507 aa10.6□□□□□ -0.71
GTDC1-214ENST00000476958 CHRDL2Q6WN34 429 aa10.58□□□□□ -0.72
GTDC1-214ENST00000476958 WDR62O43379 1518 aa10.58□□□□□ -0.72
GTDC1-214ENST00000476958 ATAD2BQ9ULI0 1458 aa10.57□□□□□ -0.72
GTDC1-214ENST00000476958 ARAP1Q96P48 1450 aa10.56□□□□□ -0.72
GTDC1-214ENST00000476958 PDS5BQ9NTI5 1447 aa10.56□□□□□ -0.72
GTDC1-214ENST00000476958 MRC2Q9UBG0 1479 aa10.55□□□□□ -0.72
GTDC1-214ENST00000476958 ZCCHC6Q5VYS8 1495 aaKnown RBP10.53□□□□□ -0.72
GTDC1-214ENST00000476958 HMGXB3Q12766 1538 aa10.53□□□□□ -0.72
GTDC1-214ENST00000476958 FBLN2P98095 1184 aa10.5□□□□□ -0.73
GTDC1-214ENST00000476958 REM2Q8IYK8 340 aaPredicted RBP10.46□□□□□ -0.73
GTDC1-214ENST00000476958 SPDYE2BA6NHP3 402 aa10.43□□□□□ -0.74
GTDC1-214ENST00000476958 SPDYE6P0CI01 402 aa10.43□□□□□ -0.74
GTDC1-214ENST00000476958 SPDYE2Q495Y8 402 aa10.43□□□□□ -0.74
GTDC1-214ENST00000476958 KDM4FA0A1W2PPD8 638 aa10.42□□□□□ -0.74
GTDC1-214ENST00000476958 BAZ1BQ9UIG0 1483 aaKnown RBP10.37□□□□□ -0.75
GTDC1-214ENST00000476958 CADPSQ9ULU8 1353 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms