RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 NISCHQ9Y2I1 1504 aa10.95□□□□□ -0.66
CBWD1-212ENST00000475411 DCAF8L2P0C7V8 631 aa10.42□□□□□ -0.74
CBWD1-212ENST00000475411 ABCC9O60706 1549 aa9.66□□□□□ -0.86
CBWD1-212ENST00000475411 CCDC180Q9P1Z9 1646 aa9.51□□□□□ -0.89
CBWD1-212ENST00000475411 SHROOM4Q9ULL8 1493 aa9.5□□□□□ -0.89
CBWD1-212ENST00000475411 SUPT5HO00267 1087 aaKnown RBP9.36□□□□□ -0.91
CBWD1-212ENST00000475411 FAM9AQ8IZU1 332 aaPredicted RBP9.34□□□□□ -0.91
CBWD1-212ENST00000475411 RB1CC1Q8TDY2 1594 aa9.27□□□□□ -0.93
CBWD1-212ENST00000475411 PABPN1Q86U42 306 aaKnown RBP eCLIP9.24□□□□□ -0.93
CBWD1-212ENST00000475411 NACADO15069 1562 aa9.16□□□□□ -0.94
CBWD1-212ENST00000475411 ZCCHC6Q5VYS8 1495 aaKnown RBP9.06□□□□□ -0.96
CBWD1-212ENST00000475411 SCRIBQ14160 1630 aa9.03□□□□□ -0.96
CBWD1-212ENST00000475411 MYT1Q01538 1121 aa8.98□□□□□ -0.97
CBWD1-212ENST00000475411 APLP2Q06481 763 aa8.95□□□□□ -0.98
CBWD1-212ENST00000475411 AEBP2Q6ZN18 517 aaPredicted RBP8.95□□□□□ -0.98
CBWD1-212ENST00000475411 DCAF1Q9Y4B6 1507 aa8.91□□□□□ -0.98
CBWD1-212ENST00000475411 PELP1Q8IZL8 1130 aaKnown RBP8.89□□□□□ -0.99
CBWD1-212ENST00000475411 TRIM41Q8WV44 630 aa8.86□□□□□ -0.99
CBWD1-212ENST00000475411 MYO15BQ96JP2 1530 aa8.86□□□□□ -0.99
CBWD1-212ENST00000475411 CHIC1Q5VXU3 224 aa8.79□□□□□ -1
CBWD1-212ENST00000475411 ERCC6Q03468 1493 aa8.76□□□□□ -1.01
CBWD1-212ENST00000475411 EHMT2Q96KQ7 1210 aa8.75□□□□□ -1.01
CBWD1-212ENST00000475411 ATP1B4Q9UN42 357 aaPredicted RBP8.74□□□□□ -1.01
CBWD1-212ENST00000475411 UBTFP17480 764 aaKnown RBP8.73□□□□□ -1.01
CBWD1-212ENST00000475411 BAZ1BQ9UIG0 1483 aaKnown RBP8.73□□□□□ -1.01
CBWD1-212ENST00000475411 FBLN2P98095 1184 aa8.71□□□□□ -1.01
CBWD1-212ENST00000475411 BAZ1AQ9NRL2 1556 aaPredicted RBP8.69□□□□□ -1.02
CBWD1-212ENST00000475411 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.68□□□□□ -1.02
CBWD1-212ENST00000475411 RANGAP1P46060 587 aaPredicted RBP8.68□□□□□ -1.02
CBWD1-212ENST00000475411 HNRNPUL2Q1KMD3 747 aaKnown RBP8.68□□□□□ -1.02
CBWD1-212ENST00000475411 SMARCA2P51531 1590 aa8.66□□□□□ -1.02
CBWD1-212ENST00000475411 CECR2Q9BXF3 1484 aa8.65□□□□□ -1.02
CBWD1-212ENST00000475411 MYT1LQ9UL68 1186 aa8.64□□□□□ -1.03
CBWD1-212ENST00000475411 TTBK1Q5TCY1 1321 aaPredicted RBP8.63□□□□□ -1.03
CBWD1-212ENST00000475411 NPM1P06748 294 aaKnown RBP eCLIP8.61□□□□□ -1.03
CBWD1-212ENST00000475411 PDS5BQ9NTI5 1447 aa8.59□□□□□ -1.03
CBWD1-212ENST00000475411 CHMP7Q8WUX9 453 aaPredicted RBP8.53□□□□□ -1.04
CBWD1-212ENST00000475411 RSF1Q96T23 1441 aaPredicted RBP8.47□□□□□ -1.05
CBWD1-212ENST00000475411 EIF4G1Q04637 1599 aaKnown RBP8.45□□□□□ -1.06
CBWD1-212ENST00000475411 CDK11AQ9UQ88 783 aaPredicted RBP8.45□□□□□ -1.06
CBWD1-212ENST00000475411 ATAD2BQ9ULI0 1458 aa8.43□□□□□ -1.06
CBWD1-212ENST00000475411 CADPSQ9ULU8 1353 aa8.41□□□□□ -1.06
CBWD1-212ENST00000475411 SMARCA4P51532 1647 aa8.41□□□□□ -1.06
CBWD1-212ENST00000475411 CEP164Q9UPV0 1460 aa8.41□□□□□ -1.06
CBWD1-212ENST00000475411 ESF1Q9H501 851 aaKnown RBP8.39□□□□□ -1.07
CBWD1-212ENST00000475411 ABCC8Q09428 1581 aa8.38□□□□□ -1.07
CBWD1-212ENST00000475411 NCAPD3P42695 1498 aa8.37□□□□□ -1.07
CBWD1-212ENST00000475411 CC2D2AQ9P2K1 1620 aa8.37□□□□□ -1.07
CBWD1-212ENST00000475411 TOP2AP11388 1531 aaKnown RBP8.36□□□□□ -1.07
CBWD1-212ENST00000475411 CSRNP3Q8WYN3 585 aa8.36□□□□□ -1.07
CBWD1-212ENST00000475411 MROH2BQ7Z745 1585 aa8.36□□□□□ -1.07
CBWD1-212ENST00000475411 WRNQ14191 1432 aaPredicted RBP eCLIP8.36□□□□□ -1.07
CBWD1-212ENST00000475411 KIF27Q86VH2 1401 aa8.34□□□□□ -1.07
CBWD1-212ENST00000475411 EEA1Q15075 1411 aa8.31□□□□□ -1.08
CBWD1-212ENST00000475411 TRHP20396 242 aaPredicted RBP8.31□□□□□ -1.08
CBWD1-212ENST00000475411 HMGXB3Q12766 1538 aa8.3□□□□□ -1.08
CBWD1-212ENST00000475411 FANCD2Q9BXW9 1451 aa8.3□□□□□ -1.08
CBWD1-212ENST00000475411 SOGA1O94964 1423 aa8.27□□□□□ -1.08
CBWD1-212ENST00000475411 OSCARQ8IYS5 282 aa8.27□□□□□ -1.09
CBWD1-212ENST00000475411 CCDC88BA6NC98 1476 aa8.26□□□□□ -1.09
CBWD1-212ENST00000475411 CARMIL2Q6F5E8 1435 aa8.26□□□□□ -1.09
CBWD1-212ENST00000475411 P3H3Q8IVL6 736 aa8.26□□□□□ -1.09
CBWD1-212ENST00000475411 BICRAQ9NZM4 1560 aa8.25□□□□□ -1.09
CBWD1-212ENST00000475411 CUX2O14529 1486 aa8.24□□□□□ -1.09
CBWD1-212ENST00000475411 MRC2Q9UBG0 1479 aa8.24□□□□□ -1.09
CBWD1-212ENST00000475411 WIZO95785 1651 aa8.23□□□□□ -1.09
CBWD1-212ENST00000475411 ARID3CA6NKF2 412 aa8.22□□□□□ -1.09
CBWD1-212ENST00000475411 PLEKHD1A6NEE1 506 aa8.21□□□□□ -1.09
CBWD1-212ENST00000475411 ITGAEP38570 1179 aa8.2□□□□□ -1.1
CBWD1-212ENST00000475411 FAM50AQ14320 339 aaKnown RBP8.2□□□□□ -1.1
CBWD1-212ENST00000475411 ZNF777Q9ULD5 760 aaPredicted RBP8.19□□□□□ -1.1
CBWD1-212ENST00000475411 DNAJC5BQ9UF47 199 aa8.19□□□□□ -1.1
CBWD1-212ENST00000475411 LAMC3Q9Y6N6 1575 aa8.19□□□□□ -1.1
CBWD1-212ENST00000475411 ERICH6Q7L0X2 663 aa8.18□□□□□ -1.1
CBWD1-212ENST00000475411 TDRD9Q8NDG6 1382 aaKnown RBP8.17□□□□□ -1.1
CBWD1-212ENST00000475411 CARMIL1Q5VZK9 1371 aa8.16□□□□□ -1.1
CBWD1-212ENST00000475411 IFT140Q96RY7 1462 aa8.16□□□□□ -1.1
CBWD1-212ENST00000475411 BCANQ96GW7 911 aa8.15□□□□□ -1.1
CBWD1-212ENST00000475411 KCNH8Q96L42 1107 aa8.15□□□□□ -1.11
CBWD1-212ENST00000475411 UNC13AQ9UPW8 1703 aa8.15□□□□□ -1.11
CBWD1-212ENST00000475411 STAG3Q9UJ98 1225 aa8.14□□□□□ -1.11
CBWD1-212ENST00000475411 GOLGA3Q08378 1498 aa8.14□□□□□ -1.11
CBWD1-212ENST00000475411 ARID4BQ4LE39 1312 aaPredicted RBP8.14□□□□□ -1.11
CBWD1-212ENST00000475411 MTUS2Q5JR59 1369 aa8.14□□□□□ -1.11
CBWD1-212ENST00000475411 TRIM52Q96A61 297 aa8.13□□□□□ -1.11
CBWD1-212ENST00000475411 TSPY4P0CV99 314 aa8.13□□□□□ -1.11
CBWD1-212ENST00000475411 TSPY10P0CW01 314 aa8.13□□□□□ -1.11
CBWD1-212ENST00000475411 CENPBP07199 599 aaPredicted RBP8.12□□□□□ -1.11
CBWD1-212ENST00000475411 CFTRP13569 1480 aa8.12□□□□□ -1.11
CBWD1-212ENST00000475411 CLIP1P30622 1438 aa8.11□□□□□ -1.11
CBWD1-212ENST00000475411 CCER1Q8TC90 406 aaPredicted RBP8.1□□□□□ -1.11
CBWD1-212ENST00000475411 PLPPR3Q6T4P5 718 aa8.09□□□□□ -1.11
CBWD1-212ENST00000475411 PCGF6Q9BYE7 350 aa8.09□□□□□ -1.11
CBWD1-212ENST00000475411 GAPVD1Q14C86 1478 aa8.09□□□□□ -1.11
CBWD1-212ENST00000475411 GRIN2BQ13224 1484 aa8.09□□□□□ -1.11
CBWD1-212ENST00000475411 CYB5RLQ6IPT4 315 aa8.08□□□□□ -1.12
CBWD1-212ENST00000475411 NESP48681 1621 aa8.08□□□□□ -1.12
CBWD1-212ENST00000475411 ACIN1Q9UKV3 1341 aaKnown RBP8.08□□□□□ -1.12
CBWD1-212ENST00000475411 LOC105371045A0A1W2PR82 267 aa8.08□□□□□ -1.12
CBWD1-212ENST00000475411 FHAD1B1AJZ9 1412 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms