RNA–Protein interactions for RNA: ENST00000474457.1

FBXO9-209, Transcript of F-box protein 9, humanhuman

TSL 1 (best)

Gene FBXO9, Length 2,913 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO9-209ENST00000474457 NISCHQ9Y2I1 1504 aa14.58□□□□□ -0.07
FBXO9-209ENST00000474457 AEBP2Q6ZN18 517 aaPredicted RBP14.25□□□□□ -0.13
FBXO9-209ENST00000474457 CHIC1Q5VXU3 224 aa14.08□□□□□ -0.15
FBXO9-209ENST00000474457 CCDC180Q9P1Z9 1646 aa12.73□□□□□ -0.37
FBXO9-209ENST00000474457 PHF23Q9BUL5 403 aaPredicted RBP12.46□□□□□ -0.42
FBXO9-209ENST00000474457 ZCCHC6Q5VYS8 1495 aaKnown RBP12.27□□□□□ -0.45
FBXO9-209ENST00000474457 HRCP23327 699 aa12.17□□□□□ -0.46
FBXO9-209ENST00000474457 SLC24A1O60721 1099 aa12.13□□□□□ -0.47
FBXO9-209ENST00000474457 PELP1Q8IZL8 1130 aaKnown RBP12.13□□□□□ -0.47
FBXO9-209ENST00000474457 DCAF1Q9Y4B6 1507 aa12.03□□□□□ -0.48
FBXO9-209ENST00000474457 ABCC9O60706 1549 aa12.02□□□□□ -0.48
FBXO9-209ENST00000474457 SENP3Q9H4L4 574 aaPredicted RBP11.99□□□□□ -0.49
FBXO9-209ENST00000474457 DCAF8L2P0C7V8 631 aa11.94□□□□□ -0.5
FBXO9-209ENST00000474457 SHROOM4Q9ULL8 1493 aa11.9□□□□□ -0.51
FBXO9-209ENST00000474457 MYO15BQ96JP2 1530 aa11.88□□□□□ -0.51
FBXO9-209ENST00000474457 NACADO15069 1562 aa11.81□□□□□ -0.52
FBXO9-209ENST00000474457 MYT1Q01538 1121 aa11.78□□□□□ -0.52
FBXO9-209ENST00000474457 EHMT2Q96KQ7 1210 aa11.75□□□□□ -0.53
FBXO9-209ENST00000474457 PCGF6Q9BYE7 350 aa11.74□□□□□ -0.53
FBXO9-209ENST00000474457 SCRIBQ14160 1630 aa11.73□□□□□ -0.53
FBXO9-209ENST00000474457 PPARGC1BQ86YN6 1023 aaKnown RBP11.72□□□□□ -0.53
FBXO9-209ENST00000474457 RB1CC1Q8TDY2 1594 aa11.71□□□□□ -0.54
FBXO9-209ENST00000474457 UNC13AQ9UPW8 1703 aa11.65□□□□□ -0.54
FBXO9-209ENST00000474457 SUPT5HO00267 1087 aaKnown RBP11.63□□□□□ -0.55
FBXO9-209ENST00000474457 ZEB1P37275 1124 aaPredicted RBP11.54□□□□□ -0.56
FBXO9-209ENST00000474457 PLPPR3Q6T4P5 718 aa11.53□□□□□ -0.56
FBXO9-209ENST00000474457 SCAF1Q9H7N4 1312 aaKnown RBP11.51□□□□□ -0.57
FBXO9-209ENST00000474457 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
FBXO9-209ENST00000474457 BICRAQ9NZM4 1560 aa11.46□□□□□ -0.57
FBXO9-209ENST00000474457 CECR2Q9BXF3 1484 aa11.37□□□□□ -0.59
FBXO9-209ENST00000474457 PABPN1Q86U42 306 aaKnown RBP eCLIP11.32□□□□□ -0.6
FBXO9-209ENST00000474457 RSF1Q96T23 1441 aaPredicted RBP11.31□□□□□ -0.6
FBXO9-209ENST00000474457 MROH2BQ7Z745 1585 aa11.3□□□□□ -0.6
FBXO9-209ENST00000474457 ACIN1Q9UKV3 1341 aaKnown RBP11.27□□□□□ -0.61
FBXO9-209ENST00000474457 WIZO95785 1651 aa11.24□□□□□ -0.61
FBXO9-209ENST00000474457 SMARCA4P51532 1647 aa11.24□□□□□ -0.61
FBXO9-209ENST00000474457 BAZ1AQ9NRL2 1556 aaPredicted RBP11.23□□□□□ -0.61
FBXO9-209ENST00000474457 LOC105371045A0A1W2PR82 267 aa11.2□□□□□ -0.62
FBXO9-209ENST00000474457 CENPBP07199 599 aaPredicted RBP11.19□□□□□ -0.62
FBXO9-209ENST00000474457 RTN4Q9NQC3 1192 aaKnown RBP11.18□□□□□ -0.62
FBXO9-209ENST00000474457 FOXD1Q16676 465 aa11.15□□□□□ -0.63
FBXO9-209ENST00000474457 NEUROD1Q13562 356 aa11.14□□□□□ -0.63
FBXO9-209ENST00000474457 TTBK1Q5TCY1 1321 aaPredicted RBP11.12□□□□□ -0.63
FBXO9-209ENST00000474457 GTF3C3Q9Y5Q9 886 aa11.12□□□□□ -0.63
FBXO9-209ENST00000474457 PEG3Q9GZU2 1588 aa11.1□□□□□ -0.63
FBXO9-209ENST00000474457 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.63
FBXO9-209ENST00000474457 EIF4G1Q04637 1599 aaKnown RBP11.07□□□□□ -0.64
FBXO9-209ENST00000474457 TOP2AP11388 1531 aaKnown RBP11.06□□□□□ -0.64
FBXO9-209ENST00000474457 KCNA4P22459 653 aa11.02□□□□□ -0.64
FBXO9-209ENST00000474457 ATAD2BQ9ULI0 1458 aa11.02□□□□□ -0.65
FBXO9-209ENST00000474457 SMARCA2P51531 1590 aa11□□□□□ -0.65
FBXO9-209ENST00000474457 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
FBXO9-209ENST00000474457 DIEXFQ68CQ4 756 aaKnown RBP10.98□□□□□ -0.65
FBXO9-209ENST00000474457 CCDC88BA6NC98 1476 aa10.95□□□□□ -0.66
FBXO9-209ENST00000474457 PPP6R1Q9UPN7 881 aa10.94□□□□□ -0.66
FBXO9-209ENST00000474457 ADRA2BP18089 450 aa10.93□□□□□ -0.66
FBXO9-209ENST00000474457 BAZ1BQ9UIG0 1483 aaKnown RBP10.93□□□□□ -0.66
FBXO9-209ENST00000474457 CC2D2AQ9P2K1 1620 aa10.92□□□□□ -0.66
FBXO9-209ENST00000474457 HMGXB3Q12766 1538 aa10.91□□□□□ -0.66
FBXO9-209ENST00000474457 CCER1Q8TC90 406 aaPredicted RBP10.9□□□□□ -0.66
FBXO9-209ENST00000474457 NCAPD3P42695 1498 aa10.9□□□□□ -0.67
FBXO9-209ENST00000474457 NCBP3Q53F19 620 aaKnown RBP10.87□□□□□ -0.67
FBXO9-209ENST00000474457 TRIM41Q8WV44 630 aa10.85□□□□□ -0.67
FBXO9-209ENST00000474457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.82□□□□□ -0.68
FBXO9-209ENST00000474457 CLSPNQ9HAW4 1339 aa10.82□□□□□ -0.68
FBXO9-209ENST00000474457 ZNF316A6NFI3 1004 aaPredicted RBP10.78□□□□□ -0.68
FBXO9-209ENST00000474457 ABCC8Q09428 1581 aa10.77□□□□□ -0.68
FBXO9-209ENST00000474457 BCL11AQ9H165 835 aa10.74□□□□□ -0.69
FBXO9-209ENST00000474457 DAXXQ9UER7 740 aaPredicted RBP10.74□□□□□ -0.69
FBXO9-209ENST00000474457 ANP32EQ9BTT0 268 aa10.72□□□□□ -0.69
FBXO9-209ENST00000474457 PRDM2Q13029 1718 aa10.71□□□□□ -0.69
FBXO9-209ENST00000474457 FAM9AQ8IZU1 332 aaPredicted RBP10.7□□□□□ -0.7
FBXO9-209ENST00000474457 YTHDC1Q96MU7 727 aaKnown RBP10.7□□□□□ -0.7
FBXO9-209ENST00000474457 DNAJC5BQ9UF47 199 aa10.7□□□□□ -0.7
FBXO9-209ENST00000474457 CFTRP13569 1480 aa10.67□□□□□ -0.7
FBXO9-209ENST00000474457 WRNQ14191 1432 aaPredicted RBP eCLIP10.67□□□□□ -0.7
FBXO9-209ENST00000474457 SYNJ1O43426 1573 aa10.66□□□□□ -0.7
FBXO9-209ENST00000474457 MIER1Q8N108 512 aa10.63□□□□□ -0.71
FBXO9-209ENST00000474457 SLC4A1APQ9BWU0 796 aaKnown RBP10.61□□□□□ -0.71
FBXO9-209ENST00000474457 NESP48681 1621 aa10.6□□□□□ -0.71
FBXO9-209ENST00000474457 CADPSQ9ULU8 1353 aa10.6□□□□□ -0.71
FBXO9-209ENST00000474457 BIVM-ERCC5R4GMW8 1640 aa10.59□□□□□ -0.71
FBXO9-209ENST00000474457 SUPT16HQ9Y5B9 1047 aaKnown RBP10.59□□□□□ -0.71
FBXO9-209ENST00000474457 TOP2BQ02880 1626 aa10.58□□□□□ -0.72
FBXO9-209ENST00000474457 TSHZ2Q9NRE2 1034 aa10.57□□□□□ -0.72
FBXO9-209ENST00000474457 CUX1P39880 1505 aa10.57□□□□□ -0.72
FBXO9-209ENST00000474457 PIAS4Q8N2W9 510 aaPredicted RBP10.56□□□□□ -0.72
FBXO9-209ENST00000474457 PRKCSHP14314 528 aaPredicted RBP10.55□□□□□ -0.72
FBXO9-209ENST00000474457 LAMC3Q9Y6N6 1575 aa10.54□□□□□ -0.72
FBXO9-209ENST00000474457 SOGA1O94964 1423 aa10.53□□□□□ -0.72
FBXO9-209ENST00000474457 RUSC2Q8N2Y8 1516 aa10.53□□□□□ -0.72
FBXO9-209ENST00000474457 KIF21AQ7Z4S6 1674 aa10.51□□□□□ -0.73
FBXO9-209ENST00000474457 FANCD2Q9BXW9 1451 aa10.51□□□□□ -0.73
FBXO9-209ENST00000474457 CEP162Q5TB80 1403 aa10.48□□□□□ -0.73
FBXO9-209ENST00000474457 TNIKQ9UKE5 1360 aa10.45□□□□□ -0.74
FBXO9-209ENST00000474457 DNMBPQ6XZF7 1577 aa10.43□□□□□ -0.74
FBXO9-209ENST00000474457 URB2Q14146 1524 aaKnown RBP10.43□□□□□ -0.74
FBXO9-209ENST00000474457 CEP164Q9UPV0 1460 aa10.43□□□□□ -0.74
FBXO9-209ENST00000474457 TOPBP1Q92547 1522 aa10.42□□□□□ -0.74
FBXO9-209ENST00000474457 FGD5Q6ZNL6 1462 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 244.9 ms