RNA–Protein interactions for RNA: ENST00000473217.5

GIT1-204, Transcript of GIT ArfGAP 1, humanhuman

TSL 1 (best)

Gene GIT1, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIT1-204ENST00000473217 NISCHQ9Y2I1 1504 aa24.08■■□□□ 1.45
GIT1-204ENST00000473217 SHROOM4Q9ULL8 1493 aa20.97■□□□□ 0.95
GIT1-204ENST00000473217 DCAF8L2P0C7V8 631 aa20.85■□□□□ 0.93
GIT1-204ENST00000473217 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
GIT1-204ENST00000473217 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
GIT1-204ENST00000473217 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
GIT1-204ENST00000473217 ABCC9O60706 1549 aa19.65■□□□□ 0.74
GIT1-204ENST00000473217 CHIC1Q5VXU3 224 aa19.48■□□□□ 0.71
GIT1-204ENST00000473217 DCAF1Q9Y4B6 1507 aa19.48■□□□□ 0.71
GIT1-204ENST00000473217 SCRIBQ14160 1630 aa19.44■□□□□ 0.7
GIT1-204ENST00000473217 PCGF6Q9BYE7 350 aa19.44■□□□□ 0.7
GIT1-204ENST00000473217 HRCP23327 699 aa19.4■□□□□ 0.7
GIT1-204ENST00000473217 PPARGC1BQ86YN6 1023 aaKnown RBP19.31■□□□□ 0.68
GIT1-204ENST00000473217 MYO15BQ96JP2 1530 aa19.27■□□□□ 0.67
GIT1-204ENST00000473217 LOC105371045A0A1W2PR82 267 aa19.13■□□□□ 0.65
GIT1-204ENST00000473217 EHMT2Q96KQ7 1210 aa19.1■□□□□ 0.65
GIT1-204ENST00000473217 RSF1Q96T23 1441 aaPredicted RBP19.07■□□□□ 0.64
GIT1-204ENST00000473217 FAM9AQ8IZU1 332 aaPredicted RBP19.03■□□□□ 0.64
GIT1-204ENST00000473217 CECR2Q9BXF3 1484 aa19.01■□□□□ 0.63
GIT1-204ENST00000473217 NACADO15069 1562 aa18.99■□□□□ 0.63
GIT1-204ENST00000473217 PELP1Q8IZL8 1130 aaKnown RBP18.97■□□□□ 0.63
GIT1-204ENST00000473217 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
GIT1-204ENST00000473217 TRIM41Q8WV44 630 aa18.93■□□□□ 0.62
GIT1-204ENST00000473217 RB1CC1Q8TDY2 1594 aa18.83■□□□□ 0.61
GIT1-204ENST00000473217 MROH2BQ7Z745 1585 aa18.83■□□□□ 0.6
GIT1-204ENST00000473217 WIZO95785 1651 aa18.69■□□□□ 0.58
GIT1-204ENST00000473217 BAZ1AQ9NRL2 1556 aaPredicted RBP18.49■□□□□ 0.55
GIT1-204ENST00000473217 SCAF1Q9H7N4 1312 aaKnown RBP18.45■□□□□ 0.54
GIT1-204ENST00000473217 TRIM26Q12899 539 aaPredicted RBP18.45■□□□□ 0.54
GIT1-204ENST00000473217 UNC13AQ9UPW8 1703 aa18.42■□□□□ 0.54
GIT1-204ENST00000473217 TTBK1Q5TCY1 1321 aaPredicted RBP18.36■□□□□ 0.53
GIT1-204ENST00000473217 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
GIT1-204ENST00000473217 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
GIT1-204ENST00000473217 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
GIT1-204ENST00000473217 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
GIT1-204ENST00000473217 MYT1Q01538 1121 aa18.3■□□□□ 0.52
GIT1-204ENST00000473217 BICRAQ9NZM4 1560 aa18.29■□□□□ 0.52
GIT1-204ENST00000473217 TOP2AP11388 1531 aaKnown RBP18.26■□□□□ 0.51
GIT1-204ENST00000473217 SMARCA2P51531 1590 aa18.19■□□□□ 0.5
GIT1-204ENST00000473217 RANGAP1P46060 587 aaPredicted RBP18.18■□□□□ 0.5
GIT1-204ENST00000473217 UBTFP17480 764 aaKnown RBP18.17■□□□□ 0.5
GIT1-204ENST00000473217 CENPBP07199 599 aaPredicted RBP18.14■□□□□ 0.49
GIT1-204ENST00000473217 GTF3C3Q9Y5Q9 886 aa18.13■□□□□ 0.49
GIT1-204ENST00000473217 SOGA1O94964 1423 aa18.13■□□□□ 0.49
GIT1-204ENST00000473217 RUSC2Q8N2Y8 1516 aa18.06■□□□□ 0.48
GIT1-204ENST00000473217 BAZ1BQ9UIG0 1483 aaKnown RBP18.05■□□□□ 0.48
GIT1-204ENST00000473217 ACIN1Q9UKV3 1341 aaKnown RBP18.05■□□□□ 0.48
GIT1-204ENST00000473217 ATAD2BQ9ULI0 1458 aa18.05■□□□□ 0.48
GIT1-204ENST00000473217 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
GIT1-204ENST00000473217 YTHDC1Q96MU7 727 aaKnown RBP18.05■□□□□ 0.48
GIT1-204ENST00000473217 NEUROD1Q13562 356 aa18.04■□□□□ 0.48
GIT1-204ENST00000473217 EIF4G1Q04637 1599 aaKnown RBP18.04■□□□□ 0.48
GIT1-204ENST00000473217 CSRNP3Q8WYN3 585 aa18.03■□□□□ 0.48
GIT1-204ENST00000473217 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
GIT1-204ENST00000473217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.95■□□□□ 0.46
GIT1-204ENST00000473217 DIEXFQ68CQ4 756 aaKnown RBP17.89■□□□□ 0.45
GIT1-204ENST00000473217 CEP162Q5TB80 1403 aa17.86■□□□□ 0.45
GIT1-204ENST00000473217 PEG3Q9GZU2 1588 aa17.82■□□□□ 0.44
GIT1-204ENST00000473217 SYNJ1O43426 1573 aa17.81■□□□□ 0.44
GIT1-204ENST00000473217 TNIKQ9UKE5 1360 aa17.75■□□□□ 0.43
GIT1-204ENST00000473217 GOLGA3Q08378 1498 aa17.7■□□□□ 0.42
GIT1-204ENST00000473217 EEA1Q15075 1411 aa17.69■□□□□ 0.42
GIT1-204ENST00000473217 HNRNPUL2Q1KMD3 747 aaKnown RBP17.67■□□□□ 0.42
GIT1-204ENST00000473217 APLP2Q06481 763 aa17.66■□□□□ 0.42
GIT1-204ENST00000473217 NCAPD3P42695 1498 aa17.66■□□□□ 0.42
GIT1-204ENST00000473217 RAPGEF2Q9Y4G8 1499 aa17.64■□□□□ 0.41
GIT1-204ENST00000473217 CLIP1P30622 1438 aa17.61■□□□□ 0.41
GIT1-204ENST00000473217 CEP164Q9UPV0 1460 aa17.61■□□□□ 0.41
GIT1-204ENST00000473217 HMGXB3Q12766 1538 aa17.52■□□□□ 0.39
GIT1-204ENST00000473217 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
GIT1-204ENST00000473217 CUX1P39880 1505 aa17.5■□□□□ 0.39
GIT1-204ENST00000473217 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
GIT1-204ENST00000473217 CFTRP13569 1480 aa17.48■□□□□ 0.39
GIT1-204ENST00000473217 ATP1B4Q9UN42 357 aaPredicted RBP17.46■□□□□ 0.39
GIT1-204ENST00000473217 P3H3Q8IVL6 736 aa17.45■□□□□ 0.38
GIT1-204ENST00000473217 CADPSQ9ULU8 1353 aa17.45■□□□□ 0.38
GIT1-204ENST00000473217 CC2D2AQ9P2K1 1620 aa17.45■□□□□ 0.38
GIT1-204ENST00000473217 KIF27Q86VH2 1401 aa17.43■□□□□ 0.38
GIT1-204ENST00000473217 ITGAEP38570 1179 aa17.42■□□□□ 0.38
GIT1-204ENST00000473217 CUX2O14529 1486 aa17.41■□□□□ 0.38
GIT1-204ENST00000473217 KIF21BO75037 1637 aa17.41■□□□□ 0.38
GIT1-204ENST00000473217 VPS8Q8N3P4 1428 aa17.39■□□□□ 0.37
GIT1-204ENST00000473217 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.37
GIT1-204ENST00000473217 KANK4Q5T7N3 995 aaPredicted RBP17.38■□□□□ 0.37
GIT1-204ENST00000473217 NESP48681 1621 aa17.38■□□□□ 0.37
GIT1-204ENST00000473217 BIVM-ERCC5R4GMW8 1640 aa17.33■□□□□ 0.37
GIT1-204ENST00000473217 MIER1Q8N108 512 aa17.33■□□□□ 0.36
GIT1-204ENST00000473217 PRXQ9BXM0 1461 aa17.32■□□□□ 0.36
GIT1-204ENST00000473217 FGD5Q6ZNL6 1462 aa17.3■□□□□ 0.36
GIT1-204ENST00000473217 FANCD2Q9BXW9 1451 aa17.29■□□□□ 0.36
GIT1-204ENST00000473217 IGF1RP08069 1367 aa17.29■□□□□ 0.36
GIT1-204ENST00000473217 RAD54L2Q9Y4B4 1467 aa17.28■□□□□ 0.36
GIT1-204ENST00000473217 CARMIL1Q5VZK9 1371 aa17.27■□□□□ 0.35
GIT1-204ENST00000473217 ARAP1Q96P48 1450 aa17.26■□□□□ 0.35
GIT1-204ENST00000473217 BCANQ96GW7 911 aa17.21■□□□□ 0.35
GIT1-204ENST00000473217 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
GIT1-204ENST00000473217 ERICH3Q5RHP9 1530 aa17.18■□□□□ 0.34
GIT1-204ENST00000473217 BCL11AQ9H165 835 aa17.17■□□□□ 0.34
GIT1-204ENST00000473217 ARHGAP35Q9NRY4 1499 aa17.16■□□□□ 0.34
GIT1-204ENST00000473217 FAM50AQ14320 339 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 273.4 ms