RNA–Protein interactions for RNA: ENST00000472681.1

DMD-221, Transcript of dystrophin, humanhuman

TSL 2

Gene DMD, Length 371 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-221ENST00000472681 AEBP2Q6ZN18 517 aaPredicted RBP24.02■■□□□ 1.44
DMD-221ENST00000472681 CHIC1Q5VXU3 224 aa23.75■■□□□ 1.39
DMD-221ENST00000472681 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
DMD-221ENST00000472681 NISCHQ9Y2I1 1504 aa20.54■□□□□ 0.88
DMD-221ENST00000472681 SENP3Q9H4L4 574 aaPredicted RBP20.38■□□□□ 0.85
DMD-221ENST00000472681 PLPPR3Q6T4P5 718 aa19.42■□□□□ 0.7
DMD-221ENST00000472681 FOXD1Q16676 465 aa18.85■□□□□ 0.61
DMD-221ENST00000472681 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
DMD-221ENST00000472681 ADRA2BP18089 450 aa18.31■□□□□ 0.52
DMD-221ENST00000472681 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
DMD-221ENST00000472681 PIAS4Q8N2W9 510 aaPredicted RBP17.83■□□□□ 0.44
DMD-221ENST00000472681 ABCC9O60706 1549 aa17.6■□□□□ 0.41
DMD-221ENST00000472681 MSH5O43196 834 aa17.32■□□□□ 0.36
DMD-221ENST00000472681 DCAF8L2P0C7V8 631 aa17.15■□□□□ 0.34
DMD-221ENST00000472681 ZCCHC6Q5VYS8 1495 aaKnown RBP17.13■□□□□ 0.33
DMD-221ENST00000472681 PPP4R3CPQ6ZMV5 832 aa17.11■□□□□ 0.33
DMD-221ENST00000472681 NACADO15069 1562 aa17.05■□□□□ 0.32
DMD-221ENST00000472681 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.31
DMD-221ENST00000472681 MYO15BQ96JP2 1530 aa17.01■□□□□ 0.31
DMD-221ENST00000472681 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
DMD-221ENST00000472681 KCNA4P22459 653 aa17■□□□□ 0.31
DMD-221ENST00000472681 SCAF1Q9H7N4 1312 aaKnown RBP16.82■□□□□ 0.28
DMD-221ENST00000472681 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
DMD-221ENST00000472681 UNC13AQ9UPW8 1703 aa16.6■□□□□ 0.25
DMD-221ENST00000472681 CNKSR2Q8WXI2 1034 aa16.6■□□□□ 0.25
DMD-221ENST00000472681 SCRIBQ14160 1630 aa16.57■□□□□ 0.24
DMD-221ENST00000472681 MAPK8IP2Q13387 824 aaPredicted RBP16.53■□□□□ 0.24
DMD-221ENST00000472681 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
DMD-221ENST00000472681 NPM3O75607 178 aaKnown RBP16.5■□□□□ 0.23
DMD-221ENST00000472681 BICRAQ9NZM4 1560 aa16.48■□□□□ 0.23
DMD-221ENST00000472681 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
DMD-221ENST00000472681 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
DMD-221ENST00000472681 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
DMD-221ENST00000472681 POTEDQ86YR6 584 aa16.23■□□□□ 0.19
DMD-221ENST00000472681 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
DMD-221ENST00000472681 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
DMD-221ENST00000472681 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
DMD-221ENST00000472681 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
DMD-221ENST00000472681 EIF4G1Q04637 1599 aaKnown RBP16.03■□□□□ 0.16
DMD-221ENST00000472681 CECR2Q9BXF3 1484 aa15.98■□□□□ 0.15
DMD-221ENST00000472681 CC2D2AQ9P2K1 1620 aa15.92■□□□□ 0.14
DMD-221ENST00000472681 BAZ1AQ9NRL2 1556 aaPredicted RBP15.91■□□□□ 0.14
DMD-221ENST00000472681 SMARCA4P51532 1647 aa15.88■□□□□ 0.13
DMD-221ENST00000472681 MROH2BQ7Z745 1585 aa15.83■□□□□ 0.12
DMD-221ENST00000472681 CSRNP3Q8WYN3 585 aa15.79■□□□□ 0.12
DMD-221ENST00000472681 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.11
DMD-221ENST00000472681 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
DMD-221ENST00000472681 NCAPD3P42695 1498 aa15.74■□□□□ 0.11
DMD-221ENST00000472681 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
DMD-221ENST00000472681 PEG3Q9GZU2 1588 aa15.73■□□□□ 0.11
DMD-221ENST00000472681 WIZO95785 1651 aa15.66■□□□□ 0.1
DMD-221ENST00000472681 HMGXB3Q12766 1538 aa15.65■□□□□ 0.1
DMD-221ENST00000472681 ZBTB22O15209 634 aa15.65■□□□□ 0.1
DMD-221ENST00000472681 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
DMD-221ENST00000472681 FOXD4L1Q9NU39 408 aa15.6■□□□□ 0.09
DMD-221ENST00000472681 SUPT5HO00267 1087 aaKnown RBP15.52■□□□□ 0.08
DMD-221ENST00000472681 DCAF8L1A6NGE4 600 aa15.51■□□□□ 0.07
DMD-221ENST00000472681 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
DMD-221ENST00000472681 TOP2AP11388 1531 aaKnown RBP15.5■□□□□ 0.07
DMD-221ENST00000472681 CCDC88BA6NC98 1476 aa15.34■□□□□ 0.05
DMD-221ENST00000472681 CADPSQ9ULU8 1353 aa15.3■□□□□ 0.04
DMD-221ENST00000472681 NESP48681 1621 aa15.28■□□□□ 0.04
DMD-221ENST00000472681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.28■□□□□ 0.04
DMD-221ENST00000472681 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
DMD-221ENST00000472681 MYCNP04198 464 aaPredicted RBP15.26■□□□□ 0.03
DMD-221ENST00000472681 CFTRP13569 1480 aa15.24■□□□□ 0.03
DMD-221ENST00000472681 PDS5BQ9NTI5 1447 aa15.19■□□□□ 0.02
DMD-221ENST00000472681 ERCC6Q03468 1493 aa15.16■□□□□ 0.02
DMD-221ENST00000472681 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
DMD-221ENST00000472681 PRDM2Q13029 1718 aa15.09■□□□□ 0.01
DMD-221ENST00000472681 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
DMD-221ENST00000472681 KIF21AQ7Z4S6 1674 aa15.09■□□□□ 0.01
DMD-221ENST00000472681 ATXN8OSP0DMR3 200 aa15.08■□□□□ 0
DMD-221ENST00000472681 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
DMD-221ENST00000472681 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.03■□□□□ -0
DMD-221ENST00000472681 HNRNPUL2Q1KMD3 747 aaKnown RBP15.03■□□□□ -0
DMD-221ENST00000472681 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
DMD-221ENST00000472681 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
DMD-221ENST00000472681 SAMD1Q6SPF0 538 aaPredicted RBP14.98□□□□□ -0.01
DMD-221ENST00000472681 WDR62O43379 1518 aa14.93□□□□□ -0.02
DMD-221ENST00000472681 URB2Q14146 1524 aaKnown RBP14.93□□□□□ -0.02
DMD-221ENST00000472681 CUX2O14529 1486 aa14.93□□□□□ -0.02
DMD-221ENST00000472681 ABCC8Q09428 1581 aa14.92□□□□□ -0.02
DMD-221ENST00000472681 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
DMD-221ENST00000472681 DNMBPQ6XZF7 1577 aa14.87□□□□□ -0.03
DMD-221ENST00000472681 RNF39Q9H2S5 420 aa14.86□□□□□ -0.03
DMD-221ENST00000472681 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.03
DMD-221ENST00000472681 CUX1P39880 1505 aa14.83□□□□□ -0.04
DMD-221ENST00000472681 APLP2Q06481 763 aa14.81□□□□□ -0.04
DMD-221ENST00000472681 ATF5Q9Y2D1 282 aaPredicted RBP14.78□□□□□ -0.04
DMD-221ENST00000472681 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
DMD-221ENST00000472681 TOP2BQ02880 1626 aa14.76□□□□□ -0.05
DMD-221ENST00000472681 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
DMD-221ENST00000472681 IFT140Q96RY7 1462 aa14.76□□□□□ -0.05
DMD-221ENST00000472681 SYNJ1O43426 1573 aa14.75□□□□□ -0.05
DMD-221ENST00000472681 BIVM-ERCC5R4GMW8 1640 aa14.74□□□□□ -0.05
DMD-221ENST00000472681 SOGA1O94964 1423 aa14.74□□□□□ -0.05
DMD-221ENST00000472681 C1QBPQ07021 282 aaKnown RBP14.71□□□□□ -0.05
DMD-221ENST00000472681 RAD54L2Q9Y4B4 1467 aa14.7□□□□□ -0.06
DMD-221ENST00000472681 TARBP1Q13395 1621 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms