RNA–Protein interactions for RNA: ENST00000471558.5

FAM71F1-204, Transcript of family with sequence similarity 71 member F1, humanhuman

TSL 1 (best)

Gene FAM71F1, Length 1,201 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM71F1-204ENST00000471558 AEBP2Q6ZN18 517 aaPredicted RBP15.49■□□□□ 0.07
FAM71F1-204ENST00000471558 CHIC1Q5VXU3 224 aa15.2■□□□□ 0.02
FAM71F1-204ENST00000471558 PHF23Q9BUL5 403 aaPredicted RBP13.42□□□□□ -0.26
FAM71F1-204ENST00000471558 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
FAM71F1-204ENST00000471558 NISCHQ9Y2I1 1504 aa12.52□□□□□ -0.41
FAM71F1-204ENST00000471558 PLPPR3Q6T4P5 718 aa12.36□□□□□ -0.43
FAM71F1-204ENST00000471558 FOXD1Q16676 465 aa12.15□□□□□ -0.46
FAM71F1-204ENST00000471558 PPP6R1Q9UPN7 881 aa11.81□□□□□ -0.52
FAM71F1-204ENST00000471558 ADRA2BP18089 450 aa11.77□□□□□ -0.53
FAM71F1-204ENST00000471558 PIAS4Q8N2W9 510 aaPredicted RBP11.44□□□□□ -0.58
FAM71F1-204ENST00000471558 CCDC180Q9P1Z9 1646 aa11.2□□□□□ -0.62
FAM71F1-204ENST00000471558 MSH5O43196 834 aa11.1□□□□□ -0.63
FAM71F1-204ENST00000471558 ABCC9O60706 1549 aa11.09□□□□□ -0.63
FAM71F1-204ENST00000471558 POTEDQ86YR6 584 aa11□□□□□ -0.65
FAM71F1-204ENST00000471558 PPP4R3CPQ6ZMV5 832 aa10.93□□□□□ -0.66
FAM71F1-204ENST00000471558 KCNA4P22459 653 aa10.83□□□□□ -0.68
FAM71F1-204ENST00000471558 SCAF1Q9H7N4 1312 aaKnown RBP10.71□□□□□ -0.69
FAM71F1-204ENST00000471558 DCAF8L2P0C7V8 631 aa10.67□□□□□ -0.7
FAM71F1-204ENST00000471558 MAPK8IP2Q13387 824 aaPredicted RBP10.67□□□□□ -0.7
FAM71F1-204ENST00000471558 NCBP3Q53F19 620 aaKnown RBP10.63□□□□□ -0.71
FAM71F1-204ENST00000471558 CNKSR2Q8WXI2 1034 aa10.58□□□□□ -0.72
FAM71F1-204ENST00000471558 RB1CC1Q8TDY2 1594 aa10.56□□□□□ -0.72
FAM71F1-204ENST00000471558 NPM3O75607 178 aaKnown RBP10.53□□□□□ -0.72
FAM71F1-204ENST00000471558 UNC13AQ9UPW8 1703 aa10.5□□□□□ -0.73
FAM71F1-204ENST00000471558 NACADO15069 1562 aa10.48□□□□□ -0.73
FAM71F1-204ENST00000471558 DMRT2Q9Y5R5 561 aa10.47□□□□□ -0.73
FAM71F1-204ENST00000471558 ZCCHC6Q5VYS8 1495 aaKnown RBP10.39□□□□□ -0.75
FAM71F1-204ENST00000471558 RNF216Q9NWF9 866 aaPredicted RBP10.36□□□□□ -0.75
FAM71F1-204ENST00000471558 PABPN1Q86U42 306 aaKnown RBP eCLIP10.35□□□□□ -0.75
FAM71F1-204ENST00000471558 HOXD11P31277 338 aaPredicted RBP10.31□□□□□ -0.76
FAM71F1-204ENST00000471558 SCRIBQ14160 1630 aa10.3□□□□□ -0.76
FAM71F1-204ENST00000471558 SLC4A1APQ9BWU0 796 aaKnown RBP10.3□□□□□ -0.76
FAM71F1-204ENST00000471558 MYO15BQ96JP2 1530 aa10.29□□□□□ -0.76
FAM71F1-204ENST00000471558 DCAF1Q9Y4B6 1507 aa10.26□□□□□ -0.77
FAM71F1-204ENST00000471558 BICRAQ9NZM4 1560 aa10.26□□□□□ -0.77
FAM71F1-204ENST00000471558 DNAJC5BQ9UF47 199 aa10.24□□□□□ -0.77
FAM71F1-204ENST00000471558 EHMT2Q96KQ7 1210 aa10.13□□□□□ -0.79
FAM71F1-204ENST00000471558 CSRNP3Q8WYN3 585 aa10.02□□□□□ -0.81
FAM71F1-204ENST00000471558 SHROOM4Q9ULL8 1493 aa10.02□□□□□ -0.81
FAM71F1-204ENST00000471558 CC2D2AQ9P2K1 1620 aa10.01□□□□□ -0.81
FAM71F1-204ENST00000471558 ZBTB22O15209 634 aa10□□□□□ -0.81
FAM71F1-204ENST00000471558 EIF4G1Q04637 1599 aaKnown RBP9.99□□□□□ -0.81
FAM71F1-204ENST00000471558 DCAF8L1A6NGE4 600 aa9.95□□□□□ -0.82
FAM71F1-204ENST00000471558 SLC4A2P04920 1241 aa9.95□□□□□ -0.82
FAM71F1-204ENST00000471558 CECR2Q9BXF3 1484 aa9.91□□□□□ -0.82
FAM71F1-204ENST00000471558 FOXD4L1Q9NU39 408 aa9.9□□□□□ -0.82
FAM71F1-204ENST00000471558 SMARCA4P51532 1647 aa9.78□□□□□ -0.84
FAM71F1-204ENST00000471558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.77□□□□□ -0.85
FAM71F1-204ENST00000471558 BAZ1AQ9NRL2 1556 aaPredicted RBP9.71□□□□□ -0.85
FAM71F1-204ENST00000471558 MYCNP04198 464 aaPredicted RBP9.7□□□□□ -0.86
FAM71F1-204ENST00000471558 MROH2BQ7Z745 1585 aa9.7□□□□□ -0.86
FAM71F1-204ENST00000471558 ATAD2BQ9ULI0 1458 aa9.68□□□□□ -0.86
FAM71F1-204ENST00000471558 WIZO95785 1651 aa9.67□□□□□ -0.86
FAM71F1-204ENST00000471558 SMARCA2P51531 1590 aa9.67□□□□□ -0.86
FAM71F1-204ENST00000471558 U3KPZ7 1027 aaPredicted RBP9.67□□□□□ -0.86
FAM71F1-204ENST00000471558 NCAPD3P42695 1498 aa9.64□□□□□ -0.87
FAM71F1-204ENST00000471558 BAZ1BQ9UIG0 1483 aaKnown RBP9.64□□□□□ -0.87
FAM71F1-204ENST00000471558 HMGXB3Q12766 1538 aa9.61□□□□□ -0.87
FAM71F1-204ENST00000471558 PEG3Q9GZU2 1588 aa9.58□□□□□ -0.88
FAM71F1-204ENST00000471558 NESP48681 1621 aa9.57□□□□□ -0.88
FAM71F1-204ENST00000471558 RNF39Q9H2S5 420 aa9.57□□□□□ -0.88
FAM71F1-204ENST00000471558 ATXN8OSP0DMR3 200 aa9.55□□□□□ -0.88
FAM71F1-204ENST00000471558 ERCC6Q03468 1493 aa9.53□□□□□ -0.88
FAM71F1-204ENST00000471558 KIF21AQ7Z4S6 1674 aa9.53□□□□□ -0.88
FAM71F1-204ENST00000471558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.52□□□□□ -0.89
FAM71F1-204ENST00000471558 HNRNPUL2Q1KMD3 747 aaKnown RBP9.52□□□□□ -0.89
FAM71F1-204ENST00000471558 SAMD1Q6SPF0 538 aaPredicted RBP9.51□□□□□ -0.89
FAM71F1-204ENST00000471558 RSF1Q96T23 1441 aaPredicted RBP9.5□□□□□ -0.89
FAM71F1-204ENST00000471558 ATF5Q9Y2D1 282 aaPredicted RBP9.5□□□□□ -0.89
FAM71F1-204ENST00000471558 LAMC3Q9Y6N6 1575 aa9.46□□□□□ -0.89
FAM71F1-204ENST00000471558 TOP2AP11388 1531 aaKnown RBP9.45□□□□□ -0.9
FAM71F1-204ENST00000471558 C1QBPQ07021 282 aaKnown RBP9.43□□□□□ -0.9
FAM71F1-204ENST00000471558 PRDM2Q13029 1718 aa9.41□□□□□ -0.9
FAM71F1-204ENST00000471558 THOC2Q8NI27 1593 aaKnown RBP9.41□□□□□ -0.9
FAM71F1-204ENST00000471558 CADPSQ9ULU8 1353 aa9.38□□□□□ -0.91
FAM71F1-204ENST00000471558 SUPT5HO00267 1087 aaKnown RBP9.38□□□□□ -0.91
FAM71F1-204ENST00000471558 APLP2Q06481 763 aa9.38□□□□□ -0.91
FAM71F1-204ENST00000471558 SPINK5Q9NQ38 1064 aaPredicted RBP9.37□□□□□ -0.91
FAM71F1-204ENST00000471558 PDS5BQ9NTI5 1447 aa9.37□□□□□ -0.91
FAM71F1-204ENST00000471558 CCDC88BA6NC98 1476 aa9.36□□□□□ -0.91
FAM71F1-204ENST00000471558 CUX2O14529 1486 aa9.36□□□□□ -0.91
FAM71F1-204ENST00000471558 CEP164Q9UPV0 1460 aa9.33□□□□□ -0.92
FAM71F1-204ENST00000471558 FANCD2Q9BXW9 1451 aa9.32□□□□□ -0.92
FAM71F1-204ENST00000471558 CFTRP13569 1480 aa9.3□□□□□ -0.92
FAM71F1-204ENST00000471558 MRC2Q9UBG0 1479 aa9.3□□□□□ -0.92
FAM71F1-204ENST00000471558 ZNF219Q9P2Y4 722 aaPredicted RBP9.29□□□□□ -0.92
FAM71F1-204ENST00000471558 CAPN15O75808 1086 aa9.27□□□□□ -0.93
FAM71F1-204ENST00000471558 TRHP20396 242 aaPredicted RBP9.27□□□□□ -0.93
FAM71F1-204ENST00000471558 WDR62O43379 1518 aa9.26□□□□□ -0.93
FAM71F1-204ENST00000471558 URB2Q14146 1524 aaKnown RBP9.25□□□□□ -0.93
FAM71F1-204ENST00000471558 CACNB1Q02641 598 aaPredicted RBP9.19□□□□□ -0.94
FAM71F1-204ENST00000471558 TOPBP1Q92547 1522 aa9.17□□□□□ -0.94
FAM71F1-204ENST00000471558 POLA2Q14181 598 aa9.17□□□□□ -0.94
FAM71F1-204ENST00000471558 DNAJC5Q9H3Z4 198 aa9.17□□□□□ -0.94
FAM71F1-204ENST00000471558 DNMBPQ6XZF7 1577 aa9.16□□□□□ -0.94
FAM71F1-204ENST00000471558 ABCB7O75027 752 aa9.14□□□□□ -0.95
FAM71F1-204ENST00000471558 DSG3P32926 999 aa9.14□□□□□ -0.95
FAM71F1-204ENST00000471558 ZNF608Q9ULD9 1512 aaPredicted RBP9.12□□□□□ -0.95
FAM71F1-204ENST00000471558 EIF4G3O43432 1585 aaKnown RBP9.11□□□□□ -0.95
FAM71F1-204ENST00000471558 ABCC8Q09428 1581 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms