RNA–Protein interactions for RNA: ENST00000468712.5

SKAP2-203, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 2

Gene SKAP2, Length 955 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-203ENST00000468712 AEBP2Q6ZN18 517 aaPredicted RBP33.09■■■□□ 2.89
SKAP2-203ENST00000468712 CHIC1Q5VXU3 224 aa30.96■■■□□ 2.55
SKAP2-203ENST00000468712 SENP3Q9H4L4 574 aaPredicted RBP28.38■■■□□ 2.13
SKAP2-203ENST00000468712 PHF23Q9BUL5 403 aaPredicted RBP27.89■■■□□ 2.06
SKAP2-203ENST00000468712 FOXD1Q16676 465 aa26.53■■□□□ 1.84
SKAP2-203ENST00000468712 POTEDQ86YR6 584 aa25.82■■□□□ 1.72
SKAP2-203ENST00000468712 MSH5O43196 834 aa25.15■■□□□ 1.62
SKAP2-203ENST00000468712 NISCHQ9Y2I1 1504 aa24.7■■□□□ 1.54
SKAP2-203ENST00000468712 PIAS4Q8N2W9 510 aaPredicted RBP24.61■■□□□ 1.53
SKAP2-203ENST00000468712 PLPPR3Q6T4P5 718 aa24.21■■□□□ 1.47
SKAP2-203ENST00000468712 PPP6R1Q9UPN7 881 aa24.2■■□□□ 1.46
SKAP2-203ENST00000468712 ADRA2BP18089 450 aa24.09■■□□□ 1.45
SKAP2-203ENST00000468712 DMRT2Q9Y5R5 561 aa22.38■■□□□ 1.17
SKAP2-203ENST00000468712 MAPK8IP2Q13387 824 aaPredicted RBP22.35■■□□□ 1.17
SKAP2-203ENST00000468712 CCDC180Q9P1Z9 1646 aa22.19■■□□□ 1.14
SKAP2-203ENST00000468712 SCAF1Q9H7N4 1312 aaKnown RBP22.09■■□□□ 1.13
SKAP2-203ENST00000468712 ABCC9O60706 1549 aa22.08■■□□□ 1.13
SKAP2-203ENST00000468712 CACNB1Q02641 598 aaPredicted RBP22.04■■□□□ 1.12
SKAP2-203ENST00000468712 DCAF8L1A6NGE4 600 aa21.51■■□□□ 1.03
SKAP2-203ENST00000468712 RNF39Q9H2S5 420 aa21.37■■□□□ 1.01
SKAP2-203ENST00000468712 HOXD11P31277 338 aaPredicted RBP21.26■□□□□ 0.99
SKAP2-203ENST00000468712 RB1CC1Q8TDY2 1594 aa21.12■□□□□ 0.97
SKAP2-203ENST00000468712 PPP4R3CPQ6ZMV5 832 aa21.11■□□□□ 0.97
SKAP2-203ENST00000468712 C1QBPQ07021 282 aaKnown RBP21.03■□□□□ 0.96
SKAP2-203ENST00000468712 NACADO15069 1562 aa21.01■□□□□ 0.95
SKAP2-203ENST00000468712 CNKSR2Q8WXI2 1034 aa20.9■□□□□ 0.94
SKAP2-203ENST00000468712 RNF216Q9NWF9 866 aaPredicted RBP20.9■□□□□ 0.94
SKAP2-203ENST00000468712 MYO15BQ96JP2 1530 aa20.81■□□□□ 0.92
SKAP2-203ENST00000468712 DNAJC5BQ9UF47 199 aa20.77■□□□□ 0.92
SKAP2-203ENST00000468712 DCAF8L2P0C7V8 631 aa20.74■□□□□ 0.91
SKAP2-203ENST00000468712 PABPN1Q86U42 306 aaKnown RBP eCLIP20.55■□□□□ 0.88
SKAP2-203ENST00000468712 UNC13AQ9UPW8 1703 aa20.54■□□□□ 0.88
SKAP2-203ENST00000468712 DCAF1Q9Y4B6 1507 aa20.5■□□□□ 0.87
SKAP2-203ENST00000468712 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
SKAP2-203ENST00000468712 ZCCHC6Q5VYS8 1495 aaKnown RBP20.45■□□□□ 0.86
SKAP2-203ENST00000468712 SHROOM4Q9ULL8 1493 aa20.35■□□□□ 0.85
SKAP2-203ENST00000468712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.27■□□□□ 0.84
SKAP2-203ENST00000468712 NCBP3Q53F19 620 aaKnown RBP20.1■□□□□ 0.81
SKAP2-203ENST00000468712 POTEHQ6S545 545 aa20.09■□□□□ 0.81
SKAP2-203ENST00000468712 SCRIBQ14160 1630 aa20.07■□□□□ 0.8
SKAP2-203ENST00000468712 CC2D2AQ9P2K1 1620 aa19.99■□□□□ 0.79
SKAP2-203ENST00000468712 EIF4G1Q04637 1599 aaKnown RBP19.97■□□□□ 0.79
SKAP2-203ENST00000468712 CECR2Q9BXF3 1484 aa19.96■□□□□ 0.79
SKAP2-203ENST00000468712 NPM3O75607 178 aaKnown RBP19.77■□□□□ 0.76
SKAP2-203ENST00000468712 DSG3P32926 999 aa19.75■□□□□ 0.75
SKAP2-203ENST00000468712 U3KPZ7 1027 aaPredicted RBP19.73■□□□□ 0.75
SKAP2-203ENST00000468712 CAPN15O75808 1086 aa19.7■□□□□ 0.74
SKAP2-203ENST00000468712 SPINK5Q9NQ38 1064 aaPredicted RBP19.68■□□□□ 0.74
SKAP2-203ENST00000468712 NCAPD3P42695 1498 aa19.41■□□□□ 0.7
SKAP2-203ENST00000468712 ATAD2BQ9ULI0 1458 aa19.28■□□□□ 0.68
SKAP2-203ENST00000468712 SMARCA2P51531 1590 aa19.27■□□□□ 0.67
SKAP2-203ENST00000468712 HMGXB3Q12766 1538 aa19.24■□□□□ 0.67
SKAP2-203ENST00000468712 SMARCA4P51532 1647 aa19.23■□□□□ 0.67
SKAP2-203ENST00000468712 TRHP20396 242 aaPredicted RBP19.2■□□□□ 0.66
SKAP2-203ENST00000468712 DNAJC5Q9H3Z4 198 aa19.19■□□□□ 0.66
SKAP2-203ENST00000468712 BAZ1AQ9NRL2 1556 aaPredicted RBP19.19■□□□□ 0.66
SKAP2-203ENST00000468712 CUX2O14529 1486 aa19.18■□□□□ 0.66
SKAP2-203ENST00000468712 ABCB7O75027 752 aa19.16■□□□□ 0.66
SKAP2-203ENST00000468712 APLP2Q06481 763 aa19.16■□□□□ 0.66
SKAP2-203ENST00000468712 ZNF219Q9P2Y4 722 aaPredicted RBP19.15■□□□□ 0.66
SKAP2-203ENST00000468712 PEG3Q9GZU2 1588 aa19.14■□□□□ 0.65
SKAP2-203ENST00000468712 ERCC6Q03468 1493 aa19.1■□□□□ 0.65
SKAP2-203ENST00000468712 BAZ1BQ9UIG0 1483 aaKnown RBP19.08■□□□□ 0.64
SKAP2-203ENST00000468712 SLC4A2P04920 1241 aa19.07■□□□□ 0.64
SKAP2-203ENST00000468712 MROH2BQ7Z745 1585 aa18.97■□□□□ 0.63
SKAP2-203ENST00000468712 NESP48681 1621 aa18.96■□□□□ 0.63
SKAP2-203ENST00000468712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.95■□□□□ 0.62
SKAP2-203ENST00000468712 HNRNPUL2Q1KMD3 747 aaKnown RBP18.95■□□□□ 0.62
SKAP2-203ENST00000468712 LAMC3Q9Y6N6 1575 aa18.94■□□□□ 0.62
SKAP2-203ENST00000468712 RBM42Q9BTD8 480 aaKnown RBP18.9■□□□□ 0.62
SKAP2-203ENST00000468712 PDS5BQ9NTI5 1447 aa18.86■□□□□ 0.61
SKAP2-203ENST00000468712 THOC2Q8NI27 1593 aaKnown RBP18.81■□□□□ 0.6
SKAP2-203ENST00000468712 CADPSQ9ULU8 1353 aa18.8■□□□□ 0.6
SKAP2-203ENST00000468712 SAMD1Q6SPF0 538 aaPredicted RBP18.79■□□□□ 0.6
SKAP2-203ENST00000468712 CHRDL2Q6WN34 429 aa18.76■□□□□ 0.59
SKAP2-203ENST00000468712 WIZO95785 1651 aa18.71■□□□□ 0.59
SKAP2-203ENST00000468712 KIF21AQ7Z4S6 1674 aa18.71■□□□□ 0.59
SKAP2-203ENST00000468712 KCNA4P22459 653 aa18.7■□□□□ 0.58
SKAP2-203ENST00000468712 MRC2Q9UBG0 1479 aa18.63■□□□□ 0.57
SKAP2-203ENST00000468712 WDR62O43379 1518 aa18.6■□□□□ 0.57
SKAP2-203ENST00000468712 RSF1Q96T23 1441 aaPredicted RBP18.6■□□□□ 0.57
SKAP2-203ENST00000468712 CFTRP13569 1480 aa18.58■□□□□ 0.56
SKAP2-203ENST00000468712 CEP164Q9UPV0 1460 aa18.55■□□□□ 0.56
SKAP2-203ENST00000468712 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
SKAP2-203ENST00000468712 FANCD2Q9BXW9 1451 aa18.52■□□□□ 0.56
SKAP2-203ENST00000468712 POLA2Q14181 598 aa18.51■□□□□ 0.55
SKAP2-203ENST00000468712 SP7Q8TDD2 431 aaPredicted RBP18.48■□□□□ 0.55
SKAP2-203ENST00000468712 URB2Q14146 1524 aaKnown RBP18.35■□□□□ 0.53
SKAP2-203ENST00000468712 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.52
SKAP2-203ENST00000468712 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
SKAP2-203ENST00000468712 MYCNP04198 464 aaPredicted RBP18.32■□□□□ 0.52
SKAP2-203ENST00000468712 OSCARQ8IYS5 282 aa18.3■□□□□ 0.52
SKAP2-203ENST00000468712 AKT1S1Q96B36 256 aa18.29■□□□□ 0.52
SKAP2-203ENST00000468712 ABCC8Q09428 1581 aa18.25■□□□□ 0.51
SKAP2-203ENST00000468712 IFT140Q96RY7 1462 aa18.21■□□□□ 0.51
SKAP2-203ENST00000468712 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
SKAP2-203ENST00000468712 TOPBP1Q92547 1522 aa18.17■□□□□ 0.5
SKAP2-203ENST00000468712 PIP4P2Q8N4L2 257 aa18.15■□□□□ 0.5
SKAP2-203ENST00000468712 REM2Q8IYK8 340 aaPredicted RBP18.11■□□□□ 0.49
SKAP2-203ENST00000468712 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms