RNA–Protein interactions for RNA: ENST00000467103.2

NBPF3-206, Transcript of NBPF member 3, humanhuman

TSL 5

Gene NBPF3, Length 418 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-206ENST00000467103 AEBP2Q6ZN18 517 aaPredicted RBP25.46■■□□□ 1.67
NBPF3-206ENST00000467103 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
NBPF3-206ENST00000467103 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
NBPF3-206ENST00000467103 PHF23Q9BUL5 403 aaPredicted RBP21.66■■□□□ 1.06
NBPF3-206ENST00000467103 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
NBPF3-206ENST00000467103 FOXD1Q16676 465 aa20.16■□□□□ 0.82
NBPF3-206ENST00000467103 PLPPR3Q6T4P5 718 aa20.07■□□□□ 0.8
NBPF3-206ENST00000467103 ADRA2BP18089 450 aa19.16■□□□□ 0.66
NBPF3-206ENST00000467103 PPP6R1Q9UPN7 881 aa19.16■□□□□ 0.66
NBPF3-206ENST00000467103 PIAS4Q8N2W9 510 aaPredicted RBP19.01■□□□□ 0.63
NBPF3-206ENST00000467103 CCDC180Q9P1Z9 1646 aa18.84■□□□□ 0.61
NBPF3-206ENST00000467103 MSH5O43196 834 aa18.81■□□□□ 0.6
NBPF3-206ENST00000467103 ABCC9O60706 1549 aa18.5■□□□□ 0.55
NBPF3-206ENST00000467103 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.44
NBPF3-206ENST00000467103 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
NBPF3-206ENST00000467103 ZCCHC6Q5VYS8 1495 aaKnown RBP17.71■□□□□ 0.43
NBPF3-206ENST00000467103 RB1CC1Q8TDY2 1594 aa17.7■□□□□ 0.42
NBPF3-206ENST00000467103 NACADO15069 1562 aa17.66■□□□□ 0.42
NBPF3-206ENST00000467103 PPP4R3CPQ6ZMV5 832 aa17.6■□□□□ 0.41
NBPF3-206ENST00000467103 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
NBPF3-206ENST00000467103 DCAF1Q9Y4B6 1507 aa17.47■□□□□ 0.39
NBPF3-206ENST00000467103 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
NBPF3-206ENST00000467103 MAPK8IP2Q13387 824 aaPredicted RBP17.41■□□□□ 0.38
NBPF3-206ENST00000467103 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
NBPF3-206ENST00000467103 SCRIBQ14160 1630 aa17.35■□□□□ 0.37
NBPF3-206ENST00000467103 DMRT2Q9Y5R5 561 aa17.33■□□□□ 0.36
NBPF3-206ENST00000467103 PABPN1Q86U42 306 aaKnown RBP eCLIP17.3■□□□□ 0.36
NBPF3-206ENST00000467103 BICRAQ9NZM4 1560 aa17.22■□□□□ 0.35
NBPF3-206ENST00000467103 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
NBPF3-206ENST00000467103 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
NBPF3-206ENST00000467103 SHROOM4Q9ULL8 1493 aa17.01■□□□□ 0.31
NBPF3-206ENST00000467103 RNF216Q9NWF9 866 aaPredicted RBP16.92■□□□□ 0.3
NBPF3-206ENST00000467103 KCNA4P22459 653 aa16.89■□□□□ 0.29
NBPF3-206ENST00000467103 HOXD11P31277 338 aaPredicted RBP16.89■□□□□ 0.29
NBPF3-206ENST00000467103 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
NBPF3-206ENST00000467103 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
NBPF3-206ENST00000467103 EIF4G1Q04637 1599 aaKnown RBP16.75■□□□□ 0.27
NBPF3-206ENST00000467103 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
NBPF3-206ENST00000467103 CECR2Q9BXF3 1484 aa16.61■□□□□ 0.25
NBPF3-206ENST00000467103 DCAF8L1A6NGE4 600 aa16.59■□□□□ 0.25
NBPF3-206ENST00000467103 SMARCA4P51532 1647 aa16.51■□□□□ 0.23
NBPF3-206ENST00000467103 BAZ1AQ9NRL2 1556 aaPredicted RBP16.44■□□□□ 0.22
NBPF3-206ENST00000467103 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
NBPF3-206ENST00000467103 ATAD2BQ9ULI0 1458 aa16.36■□□□□ 0.21
NBPF3-206ENST00000467103 SMARCA2P51531 1590 aa16.32■□□□□ 0.2
NBPF3-206ENST00000467103 WIZO95785 1651 aa16.3■□□□□ 0.2
NBPF3-206ENST00000467103 NCAPD3P42695 1498 aa16.28■□□□□ 0.2
NBPF3-206ENST00000467103 BAZ1BQ9UIG0 1483 aaKnown RBP16.26■□□□□ 0.19
NBPF3-206ENST00000467103 PEG3Q9GZU2 1588 aa16.25■□□□□ 0.19
NBPF3-206ENST00000467103 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
NBPF3-206ENST00000467103 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
NBPF3-206ENST00000467103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.17
NBPF3-206ENST00000467103 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
NBPF3-206ENST00000467103 TOP2AP11388 1531 aaKnown RBP16.06■□□□□ 0.16
NBPF3-206ENST00000467103 NESP48681 1621 aa16.04■□□□□ 0.16
NBPF3-206ENST00000467103 RNF39Q9H2S5 420 aa16.02■□□□□ 0.16
NBPF3-206ENST00000467103 SUPT5HO00267 1087 aaKnown RBP15.96■□□□□ 0.15
NBPF3-206ENST00000467103 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
NBPF3-206ENST00000467103 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
NBPF3-206ENST00000467103 C1QBPQ07021 282 aaKnown RBP15.88■□□□□ 0.13
NBPF3-206ENST00000467103 LAMC3Q9Y6N6 1575 aa15.87■□□□□ 0.13
NBPF3-206ENST00000467103 CCDC88BA6NC98 1476 aa15.87■□□□□ 0.13
NBPF3-206ENST00000467103 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
NBPF3-206ENST00000467103 CADPSQ9ULU8 1353 aa15.83■□□□□ 0.12
NBPF3-206ENST00000467103 CACNB1Q02641 598 aaPredicted RBP15.78■□□□□ 0.12
NBPF3-206ENST00000467103 U3KPZ7 1027 aaPredicted RBP15.77■□□□□ 0.12
NBPF3-206ENST00000467103 CFTRP13569 1480 aa15.75■□□□□ 0.11
NBPF3-206ENST00000467103 PDS5BQ9NTI5 1447 aa15.75■□□□□ 0.11
NBPF3-206ENST00000467103 THOC2Q8NI27 1593 aaKnown RBP15.74■□□□□ 0.11
NBPF3-206ENST00000467103 PRDM2Q13029 1718 aa15.74■□□□□ 0.11
NBPF3-206ENST00000467103 FANCD2Q9BXW9 1451 aa15.71■□□□□ 0.11
NBPF3-206ENST00000467103 FOXD4L1Q9NU39 408 aa15.7■□□□□ 0.1
NBPF3-206ENST00000467103 CEP164Q9UPV0 1460 aa15.69■□□□□ 0.1
NBPF3-206ENST00000467103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.66■□□□□ 0.1
NBPF3-206ENST00000467103 HNRNPUL2Q1KMD3 747 aaKnown RBP15.66■□□□□ 0.1
NBPF3-206ENST00000467103 MRC2Q9UBG0 1479 aa15.65■□□□□ 0.1
NBPF3-206ENST00000467103 MYCNP04198 464 aaPredicted RBP15.62■□□□□ 0.09
NBPF3-206ENST00000467103 CUX2O14529 1486 aa15.61■□□□□ 0.09
NBPF3-206ENST00000467103 APLP2Q06481 763 aa15.59■□□□□ 0.09
NBPF3-206ENST00000467103 WDR62O43379 1518 aa15.58■□□□□ 0.09
NBPF3-206ENST00000467103 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.09
NBPF3-206ENST00000467103 SAMD1Q6SPF0 538 aaPredicted RBP15.56■□□□□ 0.08
NBPF3-206ENST00000467103 ZBTB22O15209 634 aa15.49■□□□□ 0.07
NBPF3-206ENST00000467103 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
NBPF3-206ENST00000467103 DNMBPQ6XZF7 1577 aa15.45■□□□□ 0.06
NBPF3-206ENST00000467103 CUX1P39880 1505 aa15.42■□□□□ 0.06
NBPF3-206ENST00000467103 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
NBPF3-206ENST00000467103 CAPN15O75808 1086 aa15.39■□□□□ 0.05
NBPF3-206ENST00000467103 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
NBPF3-206ENST00000467103 POLA1P09884 1462 aaPredicted RBP15.34■□□□□ 0.05
NBPF3-206ENST00000467103 FGD5Q6ZNL6 1462 aa15.34■□□□□ 0.05
NBPF3-206ENST00000467103 ZNF608Q9ULD9 1512 aaPredicted RBP15.34■□□□□ 0.05
NBPF3-206ENST00000467103 EHMT2Q96KQ7 1210 aa15.34■□□□□ 0.05
NBPF3-206ENST00000467103 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.05
NBPF3-206ENST00000467103 SYNJ1O43426 1573 aa15.33■□□□□ 0.05
NBPF3-206ENST00000467103 ZNF219Q9P2Y4 722 aaPredicted RBP15.33■□□□□ 0.04
NBPF3-206ENST00000467103 IFT140Q96RY7 1462 aa15.31■□□□□ 0.04
NBPF3-206ENST00000467103 TARBP1Q13395 1621 aaKnown RBP15.3■□□□□ 0.04
NBPF3-206ENST00000467103 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
NBPF3-206ENST00000467103 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms