RNA–Protein interactions for RNA: ENST00000466971.1

NFX1-206, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 5

Gene NFX1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-206ENST00000466971 AEBP2Q6ZN18 517 aaPredicted RBP12.43□□□□□ -0.42
NFX1-206ENST00000466971 CHIC1Q5VXU3 224 aa12.42□□□□□ -0.42
NFX1-206ENST00000466971 PHF23Q9BUL5 403 aaPredicted RBP10.91□□□□□ -0.66
NFX1-206ENST00000466971 NISCHQ9Y2I1 1504 aa10.63□□□□□ -0.71
NFX1-206ENST00000466971 SENP3Q9H4L4 574 aaPredicted RBP10.54□□□□□ -0.72
NFX1-206ENST00000466971 PLPPR3Q6T4P5 718 aa10.19□□□□□ -0.78
NFX1-206ENST00000466971 FOXD1Q16676 465 aa9.71□□□□□ -0.86
NFX1-206ENST00000466971 PPP6R1Q9UPN7 881 aa9.51□□□□□ -0.89
NFX1-206ENST00000466971 ADRA2BP18089 450 aa9.5□□□□□ -0.89
NFX1-206ENST00000466971 CCDC180Q9P1Z9 1646 aa9.31□□□□□ -0.92
NFX1-206ENST00000466971 PIAS4Q8N2W9 510 aaPredicted RBP9.23□□□□□ -0.93
NFX1-206ENST00000466971 KCNA4P22459 653 aa9.07□□□□□ -0.96
NFX1-206ENST00000466971 PPP4R3CPQ6ZMV5 832 aa8.98□□□□□ -0.97
NFX1-206ENST00000466971 ZCCHC6Q5VYS8 1495 aaKnown RBP8.96□□□□□ -0.98
NFX1-206ENST00000466971 MSH5O43196 834 aa8.9□□□□□ -0.98
NFX1-206ENST00000466971 DCAF1Q9Y4B6 1507 aa8.87□□□□□ -0.99
NFX1-206ENST00000466971 NCBP3Q53F19 620 aaKnown RBP8.83□□□□□ -1
NFX1-206ENST00000466971 MYO15BQ96JP2 1530 aa8.77□□□□□ -1.01
NFX1-206ENST00000466971 SCAF1Q9H7N4 1312 aaKnown RBP8.73□□□□□ -1.01
NFX1-206ENST00000466971 NPM3O75607 178 aaKnown RBP8.71□□□□□ -1.02
NFX1-206ENST00000466971 EHMT2Q96KQ7 1210 aa8.71□□□□□ -1.02
NFX1-206ENST00000466971 CNKSR2Q8WXI2 1034 aa8.69□□□□□ -1.02
NFX1-206ENST00000466971 SLC4A1APQ9BWU0 796 aaKnown RBP8.68□□□□□ -1.02
NFX1-206ENST00000466971 NACADO15069 1562 aa8.65□□□□□ -1.02
NFX1-206ENST00000466971 DCAF8L2P0C7V8 631 aa8.63□□□□□ -1.03
NFX1-206ENST00000466971 ABCC9O60706 1549 aa8.59□□□□□ -1.03
NFX1-206ENST00000466971 SHROOM4Q9ULL8 1493 aa8.56□□□□□ -1.04
NFX1-206ENST00000466971 RB1CC1Q8TDY2 1594 aa8.54□□□□□ -1.04
NFX1-206ENST00000466971 MAPK8IP2Q13387 824 aaPredicted RBP8.52□□□□□ -1.05
NFX1-206ENST00000466971 DNAJC5BQ9UF47 199 aa8.52□□□□□ -1.05
NFX1-206ENST00000466971 CSRNP3Q8WYN3 585 aa8.5□□□□□ -1.05
NFX1-206ENST00000466971 RNF216Q9NWF9 866 aaPredicted RBP8.48□□□□□ -1.05
NFX1-206ENST00000466971 DMRT2Q9Y5R5 561 aa8.46□□□□□ -1.06
NFX1-206ENST00000466971 SCRIBQ14160 1630 aa8.45□□□□□ -1.06
NFX1-206ENST00000466971 HOXD11P31277 338 aaPredicted RBP8.38□□□□□ -1.07
NFX1-206ENST00000466971 ZBTB22O15209 634 aa8.37□□□□□ -1.07
NFX1-206ENST00000466971 FOXD4L1Q9NU39 408 aa8.32□□□□□ -1.08
NFX1-206ENST00000466971 SUPT5HO00267 1087 aaKnown RBP8.3□□□□□ -1.08
NFX1-206ENST00000466971 UNC13AQ9UPW8 1703 aa8.29□□□□□ -1.08
NFX1-206ENST00000466971 BAZ1AQ9NRL2 1556 aaPredicted RBP8.24□□□□□ -1.09
NFX1-206ENST00000466971 RSF1Q96T23 1441 aaPredicted RBP8.23□□□□□ -1.09
NFX1-206ENST00000466971 BICRAQ9NZM4 1560 aa8.2□□□□□ -1.1
NFX1-206ENST00000466971 CECR2Q9BXF3 1484 aa8.17□□□□□ -1.1
NFX1-206ENST00000466971 SLC4A2P04920 1241 aa8.16□□□□□ -1.1
NFX1-206ENST00000466971 MROH2BQ7Z745 1585 aa8.16□□□□□ -1.1
NFX1-206ENST00000466971 SMARCA4P51532 1647 aa8.15□□□□□ -1.1
NFX1-206ENST00000466971 PEG3Q9GZU2 1588 aa8.1□□□□□ -1.11
NFX1-206ENST00000466971 WIZO95785 1651 aa8.09□□□□□ -1.11
NFX1-206ENST00000466971 TOP2AP11388 1531 aaKnown RBP8.08□□□□□ -1.12
NFX1-206ENST00000466971 MYCNP04198 464 aaPredicted RBP8.08□□□□□ -1.12
NFX1-206ENST00000466971 PABPN1Q86U42 306 aaKnown RBP eCLIP8.08□□□□□ -1.12
NFX1-206ENST00000466971 SMARCA2P51531 1590 aa8.05□□□□□ -1.12
NFX1-206ENST00000466971 ATXN8OSP0DMR3 200 aa8.01□□□□□ -1.13
NFX1-206ENST00000466971 ATAD2BQ9ULI0 1458 aa8□□□□□ -1.13
NFX1-206ENST00000466971 DCAF8L1A6NGE4 600 aa7.99□□□□□ -1.13
NFX1-206ENST00000466971 EIF4G1Q04637 1599 aaKnown RBP7.98□□□□□ -1.13
NFX1-206ENST00000466971 BAZ1BQ9UIG0 1483 aaKnown RBP7.97□□□□□ -1.13
NFX1-206ENST00000466971 HMGXB3Q12766 1538 aa7.97□□□□□ -1.13
NFX1-206ENST00000466971 CCDC88BA6NC98 1476 aa7.95□□□□□ -1.14
NFX1-206ENST00000466971 NCAPD3P42695 1498 aa7.95□□□□□ -1.14
NFX1-206ENST00000466971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.93□□□□□ -1.14
NFX1-206ENST00000466971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.88□□□□□ -1.15
NFX1-206ENST00000466971 HNRNPUL2Q1KMD3 747 aaKnown RBP7.88□□□□□ -1.15
NFX1-206ENST00000466971 TRIM41Q8WV44 630 aa7.88□□□□□ -1.15
NFX1-206ENST00000466971 U3KPZ7 1027 aaPredicted RBP7.88□□□□□ -1.15
NFX1-206ENST00000466971 SAMD1Q6SPF0 538 aaPredicted RBP7.86□□□□□ -1.15
NFX1-206ENST00000466971 CC2D2AQ9P2K1 1620 aa7.83□□□□□ -1.16
NFX1-206ENST00000466971 EEA1Q15075 1411 aa7.79□□□□□ -1.16
NFX1-206ENST00000466971 PRDM2Q13029 1718 aa7.79□□□□□ -1.16
NFX1-206ENST00000466971 WRNQ14191 1432 aaPredicted RBP eCLIP7.78□□□□□ -1.16
NFX1-206ENST00000466971 ATF5Q9Y2D1 282 aaPredicted RBP7.78□□□□□ -1.16
NFX1-206ENST00000466971 CFTRP13569 1480 aa7.78□□□□□ -1.16
NFX1-206ENST00000466971 ABCC8Q09428 1581 aa7.76□□□□□ -1.17
NFX1-206ENST00000466971 APLP2Q06481 763 aa7.74□□□□□ -1.17
NFX1-206ENST00000466971 CADPSQ9ULU8 1353 aa7.73□□□□□ -1.17
NFX1-206ENST00000466971 TOP2BQ02880 1626 aa7.73□□□□□ -1.17
NFX1-206ENST00000466971 BIVM-ERCC5R4GMW8 1640 aa7.73□□□□□ -1.17
NFX1-206ENST00000466971 SYNJ1O43426 1573 aa7.7□□□□□ -1.18
NFX1-206ENST00000466971 LAMC3Q9Y6N6 1575 aa7.69□□□□□ -1.18
NFX1-206ENST00000466971 FKBP8Q14318 412 aa7.67□□□□□ -1.18
NFX1-206ENST00000466971 LOC105371045A0A1W2PR82 267 aa7.64□□□□□ -1.19
NFX1-206ENST00000466971 RNF39Q9H2S5 420 aa7.64□□□□□ -1.19
NFX1-206ENST00000466971 ZNF219Q9P2Y4 722 aaPredicted RBP7.64□□□□□ -1.19
NFX1-206ENST00000466971 KIF21BO75037 1637 aa7.63□□□□□ -1.19
NFX1-206ENST00000466971 CUX1P39880 1505 aa7.63□□□□□ -1.19
NFX1-206ENST00000466971 FANCD2Q9BXW9 1451 aa7.63□□□□□ -1.19
NFX1-206ENST00000466971 SOGA1O94964 1423 aa7.63□□□□□ -1.19
NFX1-206ENST00000466971 FAM9AQ8IZU1 332 aaPredicted RBP7.63□□□□□ -1.19
NFX1-206ENST00000466971 GOLGA3Q08378 1498 aa7.62□□□□□ -1.19
NFX1-206ENST00000466971 CEP164Q9UPV0 1460 aa7.62□□□□□ -1.19
NFX1-206ENST00000466971 PDS5BQ9NTI5 1447 aa7.62□□□□□ -1.19
NFX1-206ENST00000466971 POTEDQ86YR6 584 aa7.62□□□□□ -1.19
NFX1-206ENST00000466971 DNMBPQ6XZF7 1577 aa7.61□□□□□ -1.19
NFX1-206ENST00000466971 KIF27Q86VH2 1401 aa7.61□□□□□ -1.19
NFX1-206ENST00000466971 TNIKQ9UKE5 1360 aa7.6□□□□□ -1.19
NFX1-206ENST00000466971 ERICH3Q5RHP9 1530 aa7.59□□□□□ -1.19
NFX1-206ENST00000466971 RUSC2Q8N2Y8 1516 aa7.57□□□□□ -1.2
NFX1-206ENST00000466971 C1QBPQ07021 282 aaKnown RBP7.56□□□□□ -1.2
NFX1-206ENST00000466971 TOPBP1Q92547 1522 aa7.56□□□□□ -1.2
NFX1-206ENST00000466971 FGD5Q6ZNL6 1462 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms