RNA–Protein interactions for RNA: ENST00000466590.6

CHAT-207, Transcript of choline O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CHAT, Length 2,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAT-207ENST00000466590 NISCHQ9Y2I1 1504 aa34.43■■■■□ 3.1
CHAT-207ENST00000466590 CCDC180Q9P1Z9 1646 aa29.56■■■□□ 2.32
CHAT-207ENST00000466590 ZCCHC6Q5VYS8 1495 aaKnown RBP29.18■■■□□ 2.26
CHAT-207ENST00000466590 SHROOM4Q9ULL8 1493 aa28.83■■■□□ 2.21
CHAT-207ENST00000466590 DCAF1Q9Y4B6 1507 aa28.48■■■□□ 2.15
CHAT-207ENST00000466590 SUPT5HO00267 1087 aaKnown RBP28.23■■■□□ 2.11
CHAT-207ENST00000466590 DCAF8L2P0C7V8 631 aa27.95■■■□□ 2.06
CHAT-207ENST00000466590 HRCP23327 699 aa27.89■■■□□ 2.06
CHAT-207ENST00000466590 MYO15BQ96JP2 1530 aa27.73■■■□□ 2.03
CHAT-207ENST00000466590 CHIC1Q5VXU3 224 aa27.63■■■□□ 2.01
CHAT-207ENST00000466590 ABCC9O60706 1549 aa27.57■■■□□ 2
CHAT-207ENST00000466590 PCGF6Q9BYE7 350 aa27.37■■□□□ 1.97
CHAT-207ENST00000466590 SCRIBQ14160 1630 aa27.33■■□□□ 1.97
CHAT-207ENST00000466590 PPARGC1BQ86YN6 1023 aaKnown RBP27.25■■□□□ 1.95
CHAT-207ENST00000466590 NACADO15069 1562 aa27.22■■□□□ 1.95
CHAT-207ENST00000466590 RSF1Q96T23 1441 aaPredicted RBP27.13■■□□□ 1.93
CHAT-207ENST00000466590 RB1CC1Q8TDY2 1594 aa26.96■■□□□ 1.91
CHAT-207ENST00000466590 LOC105371045A0A1W2PR82 267 aa26.69■■□□□ 1.86
CHAT-207ENST00000466590 CECR2Q9BXF3 1484 aa26.68■■□□□ 1.86
CHAT-207ENST00000466590 MROH2BQ7Z745 1585 aa26.66■■□□□ 1.86
CHAT-207ENST00000466590 TRIM26Q12899 539 aaPredicted RBP26.62■■□□□ 1.85
CHAT-207ENST00000466590 BAZ1AQ9NRL2 1556 aaPredicted RBP26.55■■□□□ 1.84
CHAT-207ENST00000466590 PELP1Q8IZL8 1130 aaKnown RBP26.54■■□□□ 1.84
CHAT-207ENST00000466590 WIZO95785 1651 aa26.53■■□□□ 1.84
CHAT-207ENST00000466590 TRIM41Q8WV44 630 aa26.45■■□□□ 1.82
CHAT-207ENST00000466590 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
CHAT-207ENST00000466590 UNC13AQ9UPW8 1703 aa26.36■■□□□ 1.81
CHAT-207ENST00000466590 ZEB1P37275 1124 aaPredicted RBP26.34■■□□□ 1.81
CHAT-207ENST00000466590 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
CHAT-207ENST00000466590 TOP2AP11388 1531 aaKnown RBP26.26■■□□□ 1.79
CHAT-207ENST00000466590 SCAF1Q9H7N4 1312 aaKnown RBP26.23■■□□□ 1.79
CHAT-207ENST00000466590 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
CHAT-207ENST00000466590 FAM9AQ8IZU1 332 aaPredicted RBP26■■□□□ 1.75
CHAT-207ENST00000466590 CCDC88BA6NC98 1476 aa25.99■■□□□ 1.75
CHAT-207ENST00000466590 BICRAQ9NZM4 1560 aa25.97■■□□□ 1.75
CHAT-207ENST00000466590 PEG3Q9GZU2 1588 aa25.92■■□□□ 1.74
CHAT-207ENST00000466590 ABCC8Q09428 1581 aa25.83■■□□□ 1.73
CHAT-207ENST00000466590 EEA1Q15075 1411 aa25.7■■□□□ 1.7
CHAT-207ENST00000466590 ACIN1Q9UKV3 1341 aaKnown RBP25.68■■□□□ 1.7
CHAT-207ENST00000466590 WRNQ14191 1432 aaPredicted RBP eCLIP25.61■■□□□ 1.69
CHAT-207ENST00000466590 NEUROD1Q13562 356 aa25.6■■□□□ 1.69
CHAT-207ENST00000466590 EHMT2Q96KQ7 1210 aa25.59■■□□□ 1.69
CHAT-207ENST00000466590 PABPN1Q86U42 306 aaKnown RBP eCLIP25.56■■□□□ 1.68
CHAT-207ENST00000466590 SOGA1O94964 1423 aa25.54■■□□□ 1.68
CHAT-207ENST00000466590 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
CHAT-207ENST00000466590 TNIKQ9UKE5 1360 aa25.52■■□□□ 1.68
CHAT-207ENST00000466590 CEP162Q5TB80 1403 aa25.49■■□□□ 1.67
CHAT-207ENST00000466590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.45■■□□□ 1.67
CHAT-207ENST00000466590 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
CHAT-207ENST00000466590 MYT1Q01538 1121 aa25.43■■□□□ 1.66
CHAT-207ENST00000466590 GTF3C3Q9Y5Q9 886 aa25.41■■□□□ 1.66
CHAT-207ENST00000466590 GOLGA3Q08378 1498 aa25.41■■□□□ 1.66
CHAT-207ENST00000466590 SYNJ1O43426 1573 aa25.41■■□□□ 1.66
CHAT-207ENST00000466590 CCER1Q8TC90 406 aaPredicted RBP25.4■■□□□ 1.66
CHAT-207ENST00000466590 CSRNP3Q8WYN3 585 aa25.39■■□□□ 1.66
CHAT-207ENST00000466590 RUSC2Q8N2Y8 1516 aa25.39■■□□□ 1.65
CHAT-207ENST00000466590 KIF21BO75037 1637 aa25.37■■□□□ 1.65
CHAT-207ENST00000466590 CENPBP07199 599 aaPredicted RBP25.35■■□□□ 1.65
CHAT-207ENST00000466590 DIEXFQ68CQ4 756 aaKnown RBP25.34■■□□□ 1.65
CHAT-207ENST00000466590 CEP164Q9UPV0 1460 aa25.29■■□□□ 1.64
CHAT-207ENST00000466590 HMGXB3Q12766 1538 aa25.21■■□□□ 1.63
CHAT-207ENST00000466590 TOP2BQ02880 1626 aa25.21■■□□□ 1.63
CHAT-207ENST00000466590 BIVM-ERCC5R4GMW8 1640 aa25.18■■□□□ 1.62
CHAT-207ENST00000466590 UBTFP17480 764 aaKnown RBP25.14■■□□□ 1.62
CHAT-207ENST00000466590 NCAPD3P42695 1498 aa25.11■■□□□ 1.61
CHAT-207ENST00000466590 CLIP1P30622 1438 aa25.02■■□□□ 1.6
CHAT-207ENST00000466590 RAPGEF2Q9Y4G8 1499 aa24.98■■□□□ 1.59
CHAT-207ENST00000466590 ERICH3Q5RHP9 1530 aa24.98■■□□□ 1.59
CHAT-207ENST00000466590 VPS8Q8N3P4 1428 aa24.98■■□□□ 1.59
CHAT-207ENST00000466590 ZNF316A6NFI3 1004 aaPredicted RBP24.95■■□□□ 1.58
CHAT-207ENST00000466590 PRDM2Q13029 1718 aa24.91■■□□□ 1.58
CHAT-207ENST00000466590 TTBK1Q5TCY1 1321 aaPredicted RBP24.89■■□□□ 1.57
CHAT-207ENST00000466590 PRXQ9BXM0 1461 aa24.88■■□□□ 1.57
CHAT-207ENST00000466590 CFTRP13569 1480 aa24.87■■□□□ 1.57
CHAT-207ENST00000466590 CUX1P39880 1505 aa24.87■■□□□ 1.57
CHAT-207ENST00000466590 YTHDC1Q96MU7 727 aaKnown RBP24.82■■□□□ 1.56
CHAT-207ENST00000466590 MIER1Q8N108 512 aa24.73■■□□□ 1.55
CHAT-207ENST00000466590 KIF27Q86VH2 1401 aa24.73■■□□□ 1.55
CHAT-207ENST00000466590 ARAP1Q96P48 1450 aa24.68■■□□□ 1.54
CHAT-207ENST00000466590 APLP2Q06481 763 aa24.64■■□□□ 1.54
CHAT-207ENST00000466590 CADPSQ9ULU8 1353 aa24.52■■□□□ 1.52
CHAT-207ENST00000466590 HNRNPUL2Q1KMD3 747 aaKnown RBP24.49■■□□□ 1.51
CHAT-207ENST00000466590 ARHGAP35Q9NRY4 1499 aa24.46■■□□□ 1.51
CHAT-207ENST00000466590 RRBP1Q9P2E9 1410 aaKnown RBP24.43■■□□□ 1.5
CHAT-207ENST00000466590 CUX2O14529 1486 aa24.43■■□□□ 1.5
CHAT-207ENST00000466590 CC2D2AQ9P2K1 1620 aa24.43■■□□□ 1.5
CHAT-207ENST00000466590 RANGAP1P46060 587 aaPredicted RBP24.4■■□□□ 1.5
CHAT-207ENST00000466590 FGD5Q6ZNL6 1462 aa24.4■■□□□ 1.5
CHAT-207ENST00000466590 CLSPNQ9HAW4 1339 aa24.4■■□□□ 1.5
CHAT-207ENST00000466590 IGF1RP08069 1367 aa24.39■■□□□ 1.49
CHAT-207ENST00000466590 MAP3K1Q13233 1512 aa24.38■■□□□ 1.49
CHAT-207ENST00000466590 KANK4Q5T7N3 995 aaPredicted RBP24.31■■□□□ 1.48
CHAT-207ENST00000466590 DNMBPQ6XZF7 1577 aa24.3■■□□□ 1.48
CHAT-207ENST00000466590 FANCD2Q9BXW9 1451 aa24.29■■□□□ 1.48
CHAT-207ENST00000466590 SUPT16HQ9Y5B9 1047 aaKnown RBP24.28■■□□□ 1.48
CHAT-207ENST00000466590 CARMIL1Q5VZK9 1371 aa24.28■■□□□ 1.48
CHAT-207ENST00000466590 TIAM1Q13009 1591 aa24.28■■□□□ 1.48
CHAT-207ENST00000466590 DHX57Q6P158 1386 aaKnown RBP24.27■■□□□ 1.48
CHAT-207ENST00000466590 CCNB3Q8WWL7 1395 aa24.22■■□□□ 1.47
CHAT-207ENST00000466590 ABCA10Q8WWZ4 1543 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms