RNA–Protein interactions for RNA: ENST00000466564.2

MYCBP2-204, Transcript of MYC binding protein 2, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene MYCBP2, Length 364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYCBP2-204ENST00000466564 AEBP2Q6ZN18 517 aaPredicted RBP17.81■□□□□ 0.44
MYCBP2-204ENST00000466564 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
MYCBP2-204ENST00000466564 SENP3Q9H4L4 574 aaPredicted RBP15.26■□□□□ 0.03
MYCBP2-204ENST00000466564 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
MYCBP2-204ENST00000466564 FOXD1Q16676 465 aa14.27□□□□□ -0.13
MYCBP2-204ENST00000466564 POTEDQ86YR6 584 aa13.9□□□□□ -0.18
MYCBP2-204ENST00000466564 MSH5O43196 834 aa13.53□□□□□ -0.24
MYCBP2-204ENST00000466564 PIAS4Q8N2W9 510 aaPredicted RBP13.19□□□□□ -0.3
MYCBP2-204ENST00000466564 NISCHQ9Y2I1 1504 aa13.02□□□□□ -0.33
MYCBP2-204ENST00000466564 PPP6R1Q9UPN7 881 aa13.01□□□□□ -0.33
MYCBP2-204ENST00000466564 PLPPR3Q6T4P5 718 aa12.99□□□□□ -0.33
MYCBP2-204ENST00000466564 ADRA2BP18089 450 aa12.92□□□□□ -0.34
MYCBP2-204ENST00000466564 DMRT2Q9Y5R5 561 aa12.05□□□□□ -0.48
MYCBP2-204ENST00000466564 MAPK8IP2Q13387 824 aaPredicted RBP11.99□□□□□ -0.49
MYCBP2-204ENST00000466564 SCAF1Q9H7N4 1312 aaKnown RBP11.86□□□□□ -0.51
MYCBP2-204ENST00000466564 CACNB1Q02641 598 aaPredicted RBP11.81□□□□□ -0.52
MYCBP2-204ENST00000466564 CCDC180Q9P1Z9 1646 aa11.81□□□□□ -0.52
MYCBP2-204ENST00000466564 ABCC9O60706 1549 aa11.75□□□□□ -0.53
MYCBP2-204ENST00000466564 RNF39Q9H2S5 420 aa11.51□□□□□ -0.57
MYCBP2-204ENST00000466564 HOXD11P31277 338 aaPredicted RBP11.47□□□□□ -0.57
MYCBP2-204ENST00000466564 DCAF8L1A6NGE4 600 aa11.45□□□□□ -0.58
MYCBP2-204ENST00000466564 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
MYCBP2-204ENST00000466564 PPP4R3CPQ6ZMV5 832 aa11.32□□□□□ -0.6
MYCBP2-204ENST00000466564 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
MYCBP2-204ENST00000466564 CNKSR2Q8WXI2 1034 aa11.23□□□□□ -0.61
MYCBP2-204ENST00000466564 DNAJC5BQ9UF47 199 aa11.22□□□□□ -0.61
MYCBP2-204ENST00000466564 RB1CC1Q8TDY2 1594 aa11.2□□□□□ -0.62
MYCBP2-204ENST00000466564 UNC13AQ9UPW8 1703 aa11.12□□□□□ -0.63
MYCBP2-204ENST00000466564 NACADO15069 1562 aa11.1□□□□□ -0.63
MYCBP2-204ENST00000466564 DCAF8L2P0C7V8 631 aa10.93□□□□□ -0.66
MYCBP2-204ENST00000466564 BICRAQ9NZM4 1560 aa10.9□□□□□ -0.67
MYCBP2-204ENST00000466564 MYO15BQ96JP2 1530 aa10.89□□□□□ -0.67
MYCBP2-204ENST00000466564 PABPN1Q86U42 306 aaKnown RBP eCLIP10.87□□□□□ -0.67
MYCBP2-204ENST00000466564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.83□□□□□ -0.68
MYCBP2-204ENST00000466564 POTEHQ6S545 545 aa10.8□□□□□ -0.68
MYCBP2-204ENST00000466564 ZCCHC6Q5VYS8 1495 aaKnown RBP10.79□□□□□ -0.68
MYCBP2-204ENST00000466564 NCBP3Q53F19 620 aaKnown RBP10.77□□□□□ -0.69
MYCBP2-204ENST00000466564 DCAF1Q9Y4B6 1507 aa10.75□□□□□ -0.69
MYCBP2-204ENST00000466564 SCRIBQ14160 1630 aa10.71□□□□□ -0.69
MYCBP2-204ENST00000466564 SHROOM4Q9ULL8 1493 aa10.68□□□□□ -0.7
MYCBP2-204ENST00000466564 CC2D2AQ9P2K1 1620 aa10.67□□□□□ -0.7
MYCBP2-204ENST00000466564 DSG3P32926 999 aa10.62□□□□□ -0.71
MYCBP2-204ENST00000466564 EIF4G1Q04637 1599 aaKnown RBP10.61□□□□□ -0.71
MYCBP2-204ENST00000466564 U3KPZ7 1027 aaPredicted RBP10.61□□□□□ -0.71
MYCBP2-204ENST00000466564 NPM3O75607 178 aaKnown RBP10.6□□□□□ -0.71
MYCBP2-204ENST00000466564 CECR2Q9BXF3 1484 aa10.58□□□□□ -0.72
MYCBP2-204ENST00000466564 SPINK5Q9NQ38 1064 aaPredicted RBP10.55□□□□□ -0.72
MYCBP2-204ENST00000466564 CAPN15O75808 1086 aa10.52□□□□□ -0.73
MYCBP2-204ENST00000466564 APLP2Q06481 763 aa10.28□□□□□ -0.76
MYCBP2-204ENST00000466564 ZNF219Q9P2Y4 722 aaPredicted RBP10.27□□□□□ -0.77
MYCBP2-204ENST00000466564 SLC4A2P04920 1241 aa10.26□□□□□ -0.77
MYCBP2-204ENST00000466564 TRHP20396 242 aaPredicted RBP10.25□□□□□ -0.77
MYCBP2-204ENST00000466564 ABCB7O75027 752 aa10.23□□□□□ -0.77
MYCBP2-204ENST00000466564 SMARCA4P51532 1647 aa10.22□□□□□ -0.77
MYCBP2-204ENST00000466564 NCAPD3P42695 1498 aa10.2□□□□□ -0.78
MYCBP2-204ENST00000466564 SMARCA2P51531 1590 aa10.17□□□□□ -0.78
MYCBP2-204ENST00000466564 HMGXB3Q12766 1538 aa10.17□□□□□ -0.78
MYCBP2-204ENST00000466564 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
MYCBP2-204ENST00000466564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.16□□□□□ -0.78
MYCBP2-204ENST00000466564 HNRNPUL2Q1KMD3 747 aaKnown RBP10.16□□□□□ -0.78
MYCBP2-204ENST00000466564 RBM42Q9BTD8 480 aaKnown RBP10.15□□□□□ -0.78
MYCBP2-204ENST00000466564 DNAJC5Q9H3Z4 198 aa10.15□□□□□ -0.78
MYCBP2-204ENST00000466564 CUX2O14529 1486 aa10.14□□□□□ -0.79
MYCBP2-204ENST00000466564 ERCC6Q03468 1493 aa10.13□□□□□ -0.79
MYCBP2-204ENST00000466564 BAZ1AQ9NRL2 1556 aaPredicted RBP10.12□□□□□ -0.79
MYCBP2-204ENST00000466564 PEG3Q9GZU2 1588 aa10.1□□□□□ -0.79
MYCBP2-204ENST00000466564 NESP48681 1621 aa10.1□□□□□ -0.79
MYCBP2-204ENST00000466564 SAMD1Q6SPF0 538 aaPredicted RBP10.08□□□□□ -0.8
MYCBP2-204ENST00000466564 BAZ1BQ9UIG0 1483 aaKnown RBP10.08□□□□□ -0.8
MYCBP2-204ENST00000466564 KIF21AQ7Z4S6 1674 aa10.08□□□□□ -0.8
MYCBP2-204ENST00000466564 CHRDL2Q6WN34 429 aa10.07□□□□□ -0.8
MYCBP2-204ENST00000466564 THOC2Q8NI27 1593 aaKnown RBP10.06□□□□□ -0.8
MYCBP2-204ENST00000466564 MROH2BQ7Z745 1585 aa10.04□□□□□ -0.8
MYCBP2-204ENST00000466564 LAMC3Q9Y6N6 1575 aa10.04□□□□□ -0.8
MYCBP2-204ENST00000466564 KCNA4P22459 653 aa10□□□□□ -0.81
MYCBP2-204ENST00000466564 WIZO95785 1651 aa9.99□□□□□ -0.81
MYCBP2-204ENST00000466564 SP7Q8TDD2 431 aaPredicted RBP9.93□□□□□ -0.82
MYCBP2-204ENST00000466564 POLA2Q14181 598 aa9.91□□□□□ -0.82
MYCBP2-204ENST00000466564 PDS5BQ9NTI5 1447 aa9.9□□□□□ -0.82
MYCBP2-204ENST00000466564 PRDM2Q13029 1718 aa9.88□□□□□ -0.83
MYCBP2-204ENST00000466564 WDR62O43379 1518 aa9.87□□□□□ -0.83
MYCBP2-204ENST00000466564 CADPSQ9ULU8 1353 aa9.87□□□□□ -0.83
MYCBP2-204ENST00000466564 MRC2Q9UBG0 1479 aa9.86□□□□□ -0.83
MYCBP2-204ENST00000466564 AKT1S1Q96B36 256 aa9.83□□□□□ -0.84
MYCBP2-204ENST00000466564 MYCNP04198 464 aaPredicted RBP9.82□□□□□ -0.84
MYCBP2-204ENST00000466564 CEP164Q9UPV0 1460 aa9.81□□□□□ -0.84
MYCBP2-204ENST00000466564 TOP2AP11388 1531 aaKnown RBP9.8□□□□□ -0.84
MYCBP2-204ENST00000466564 FANCD2Q9BXW9 1451 aa9.79□□□□□ -0.84
MYCBP2-204ENST00000466564 CFTRP13569 1480 aa9.77□□□□□ -0.85
MYCBP2-204ENST00000466564 RSF1Q96T23 1441 aaPredicted RBP9.76□□□□□ -0.85
MYCBP2-204ENST00000466564 PIP4P2Q8N4L2 257 aa9.75□□□□□ -0.85
MYCBP2-204ENST00000466564 URB2Q14146 1524 aaKnown RBP9.73□□□□□ -0.85
MYCBP2-204ENST00000466564 REM2Q8IYK8 340 aaPredicted RBP9.73□□□□□ -0.85
MYCBP2-204ENST00000466564 ZBTB12Q9Y330 459 aaPredicted RBP9.71□□□□□ -0.86
MYCBP2-204ENST00000466564 TRIM41Q8WV44 630 aa9.69□□□□□ -0.86
MYCBP2-204ENST00000466564 FXR2P51116 673 aaKnown RBP eCLIP9.66□□□□□ -0.86
MYCBP2-204ENST00000466564 CCDC88BA6NC98 1476 aa9.66□□□□□ -0.86
MYCBP2-204ENST00000466564 HAX1O00165 279 aa9.65□□□□□ -0.86
MYCBP2-204ENST00000466564 CHD1O14646 1710 aa9.63□□□□□ -0.87
MYCBP2-204ENST00000466564 RIMBP3CA6NJZ7 1639 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms