RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
VPS8-218ENST00000465818 AEBP2Q6ZN18 517 aaPredicted RBP22.53■■□□□ 1.2
VPS8-218ENST00000465818 PHF23Q9BUL5 403 aaPredicted RBP20.09■□□□□ 0.81
VPS8-218ENST00000465818 SENP3Q9H4L4 574 aaPredicted RBP18.73■□□□□ 0.59
VPS8-218ENST00000465818 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
VPS8-218ENST00000465818 NISCHQ9Y2I1 1504 aa17.94■□□□□ 0.46
VPS8-218ENST00000465818 ADRA2BP18089 450 aa17.61■□□□□ 0.41
VPS8-218ENST00000465818 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
VPS8-218ENST00000465818 FOXD1Q16676 465 aa17.46■□□□□ 0.39
VPS8-218ENST00000465818 KCNA4P22459 653 aa17.1■□□□□ 0.33
VPS8-218ENST00000465818 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
VPS8-218ENST00000465818 PPP4R3CPQ6ZMV5 832 aa16.54■□□□□ 0.24
VPS8-218ENST00000465818 PIAS4Q8N2W9 510 aaPredicted RBP16.54■□□□□ 0.24
VPS8-218ENST00000465818 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
VPS8-218ENST00000465818 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
VPS8-218ENST00000465818 NPM3O75607 178 aaKnown RBP16.14■□□□□ 0.17
VPS8-218ENST00000465818 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
VPS8-218ENST00000465818 CCDC180Q9P1Z9 1646 aa15.92■□□□□ 0.14
VPS8-218ENST00000465818 ZBTB22O15209 634 aa15.85■□□□□ 0.13
VPS8-218ENST00000465818 CNKSR2Q8WXI2 1034 aa15.84■□□□□ 0.13
VPS8-218ENST00000465818 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
VPS8-218ENST00000465818 MAPK8IP2Q13387 824 aaPredicted RBP15.65■□□□□ 0.1
VPS8-218ENST00000465818 MSH5O43196 834 aa15.6■□□□□ 0.09
VPS8-218ENST00000465818 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
VPS8-218ENST00000465818 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
VPS8-218ENST00000465818 RNF216Q9NWF9 866 aaPredicted RBP15.36■□□□□ 0.05
VPS8-218ENST00000465818 ABCC9O60706 1549 aa15.2■□□□□ 0.02
VPS8-218ENST00000465818 HOXD11P31277 338 aaPredicted RBP15.16■□□□□ 0.02
VPS8-218ENST00000465818 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
VPS8-218ENST00000465818 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
VPS8-218ENST00000465818 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
VPS8-218ENST00000465818 DCAF1Q9Y4B6 1507 aa14.86□□□□□ -0.03
VPS8-218ENST00000465818 NACADO15069 1562 aa14.81□□□□□ -0.04
VPS8-218ENST00000465818 MYO15BQ96JP2 1530 aa14.79□□□□□ -0.04
VPS8-218ENST00000465818 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.04
VPS8-218ENST00000465818 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
VPS8-218ENST00000465818 DCAF8L2P0C7V8 631 aa14.74□□□□□ -0.05
VPS8-218ENST00000465818 ATXN8OSP0DMR3 200 aa14.73□□□□□ -0.05
VPS8-218ENST00000465818 RTN4Q9NQC3 1192 aaKnown RBP14.71□□□□□ -0.05
VPS8-218ENST00000465818 POTEDQ86YR6 584 aa14.67□□□□□ -0.06
VPS8-218ENST00000465818 FKBP8Q14318 412 aa14.59□□□□□ -0.07
VPS8-218ENST00000465818 UNC13AQ9UPW8 1703 aa14.57□□□□□ -0.08
VPS8-218ENST00000465818 ATF5Q9Y2D1 282 aaPredicted RBP14.55□□□□□ -0.08
VPS8-218ENST00000465818 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
VPS8-218ENST00000465818 AMER1Q5JTC6 1135 aaPredicted RBP14.52□□□□□ -0.09
VPS8-218ENST00000465818 SLC24A1O60721 1099 aa14.4□□□□□ -0.1
VPS8-218ENST00000465818 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
VPS8-218ENST00000465818 SHROOM4Q9ULL8 1493 aa14.36□□□□□ -0.11
VPS8-218ENST00000465818 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
VPS8-218ENST00000465818 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
VPS8-218ENST00000465818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.33□□□□□ -0.12
VPS8-218ENST00000465818 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
VPS8-218ENST00000465818 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
VPS8-218ENST00000465818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.14□□□□□ -0.15
VPS8-218ENST00000465818 HNRNPUL2Q1KMD3 747 aaKnown RBP14.14□□□□□ -0.15
VPS8-218ENST00000465818 ZNF219Q9P2Y4 722 aaPredicted RBP14.05□□□□□ -0.16
VPS8-218ENST00000465818 CECR2Q9BXF3 1484 aa13.94□□□□□ -0.18
VPS8-218ENST00000465818 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
VPS8-218ENST00000465818 SMARCA4P51532 1647 aa13.93□□□□□ -0.18
VPS8-218ENST00000465818 EIF4G1Q04637 1599 aaKnown RBP13.92□□□□□ -0.18
VPS8-218ENST00000465818 BAZ1AQ9NRL2 1556 aaPredicted RBP13.91□□□□□ -0.18
VPS8-218ENST00000465818 MROH2BQ7Z745 1585 aa13.86□□□□□ -0.19
VPS8-218ENST00000465818 SPDYE4A6NLX3 237 aa13.82□□□□□ -0.2
VPS8-218ENST00000465818 PROM2Q8N271 834 aa13.81□□□□□ -0.2
VPS8-218ENST00000465818 CC2D2AQ9P2K1 1620 aa13.8□□□□□ -0.2
VPS8-218ENST00000465818 WIZO95785 1651 aa13.77□□□□□ -0.21
VPS8-218ENST00000465818 RSF1Q96T23 1441 aaPredicted RBP13.76□□□□□ -0.21
VPS8-218ENST00000465818 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
VPS8-218ENST00000465818 APLP2Q06481 763 aa13.75□□□□□ -0.21
VPS8-218ENST00000465818 SPINK5Q9NQ38 1064 aaPredicted RBP13.74□□□□□ -0.21
VPS8-218ENST00000465818 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
VPS8-218ENST00000465818 ATAD2BQ9ULI0 1458 aa13.69□□□□□ -0.22
VPS8-218ENST00000465818 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
VPS8-218ENST00000465818 HMGXB3Q12766 1538 aa13.66□□□□□ -0.22
VPS8-218ENST00000465818 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
VPS8-218ENST00000465818 BAZ1BQ9UIG0 1483 aaKnown RBP13.63□□□□□ -0.23
VPS8-218ENST00000465818 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
VPS8-218ENST00000465818 POLA2Q14181 598 aa13.63□□□□□ -0.23
VPS8-218ENST00000465818 TOP2AP11388 1531 aaKnown RBP13.62□□□□□ -0.23
VPS8-218ENST00000465818 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
VPS8-218ENST00000465818 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
VPS8-218ENST00000465818 SUPT5HO00267 1087 aaKnown RBP13.59□□□□□ -0.23
VPS8-218ENST00000465818 FBLN2P98095 1184 aa13.57□□□□□ -0.24
VPS8-218ENST00000465818 RNF39Q9H2S5 420 aa13.57□□□□□ -0.24
VPS8-218ENST00000465818 CAPN15O75808 1086 aa13.49□□□□□ -0.25
VPS8-218ENST00000465818 PLCB2Q00722 1185 aa13.47□□□□□ -0.25
VPS8-218ENST00000465818 PKD2Q13563 968 aa13.46□□□□□ -0.25
VPS8-218ENST00000465818 ABCB7O75027 752 aa13.4□□□□□ -0.26
VPS8-218ENST00000465818 CCDC88BA6NC98 1476 aa13.4□□□□□ -0.26
VPS8-218ENST00000465818 PRDM2Q13029 1718 aa13.35□□□□□ -0.27
VPS8-218ENST00000465818 C1QBPQ07021 282 aaKnown RBP13.34□□□□□ -0.27
VPS8-218ENST00000465818 LAMC3Q9Y6N6 1575 aa13.28□□□□□ -0.28
VPS8-218ENST00000465818 ZBTB12Q9Y330 459 aaPredicted RBP13.27□□□□□ -0.29
VPS8-218ENST00000465818 NESP48681 1621 aa13.25□□□□□ -0.29
VPS8-218ENST00000465818 HAP1P54257 671 aaPredicted RBP13.24□□□□□ -0.29
VPS8-218ENST00000465818 CFTRP13569 1480 aa13.23□□□□□ -0.29
VPS8-218ENST00000465818 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
VPS8-218ENST00000465818 DSG3P32926 999 aa13.2□□□□□ -0.3
VPS8-218ENST00000465818 KIF21AQ7Z4S6 1674 aa13.2□□□□□ -0.3
VPS8-218ENST00000465818 NPM1P06748 294 aaKnown RBP eCLIP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms