RNA–Protein interactions for RNA: ENST00000464752.1

SRRM3-201, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 2

Gene SRRM3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-201ENST00000464752 NISCHQ9Y2I1 1504 aa42.29■■■■■ 4.36
SRRM3-201ENST00000464752 SHROOM4Q9ULL8 1493 aa36.34■■■■□ 3.41
SRRM3-201ENST00000464752 CCDC180Q9P1Z9 1646 aa35.77■■■■□ 3.32
SRRM3-201ENST00000464752 ZCCHC6Q5VYS8 1495 aaKnown RBP35.74■■■■□ 3.31
SRRM3-201ENST00000464752 SUPT5HO00267 1087 aaKnown RBP35.66■■■■□ 3.3
SRRM3-201ENST00000464752 DCAF8L2P0C7V8 631 aa35.37■■■■□ 3.25
SRRM3-201ENST00000464752 CHIC1Q5VXU3 224 aa34.6■■■■□ 3.13
SRRM3-201ENST00000464752 DCAF1Q9Y4B6 1507 aa34.56■■■■□ 3.12
SRRM3-201ENST00000464752 MYO15BQ96JP2 1530 aa34.45■■■■□ 3.11
SRRM3-201ENST00000464752 SCRIBQ14160 1630 aa33.75■■■□□ 2.99
SRRM3-201ENST00000464752 ABCC9O60706 1549 aa33.7■■■□□ 2.98
SRRM3-201ENST00000464752 LOC105371045A0A1W2PR82 267 aa33.69■■■□□ 2.98
SRRM3-201ENST00000464752 PCGF6Q9BYE7 350 aa33.63■■■□□ 2.97
SRRM3-201ENST00000464752 HRCP23327 699 aa33.55■■■□□ 2.96
SRRM3-201ENST00000464752 RSF1Q96T23 1441 aaPredicted RBP33.55■■■□□ 2.96
SRRM3-201ENST00000464752 RB1CC1Q8TDY2 1594 aa33.18■■■□□ 2.9
SRRM3-201ENST00000464752 NACADO15069 1562 aa33.14■■■□□ 2.9
SRRM3-201ENST00000464752 TRIM41Q8WV44 630 aa33.13■■■□□ 2.89
SRRM3-201ENST00000464752 CECR2Q9BXF3 1484 aa33.1■■■□□ 2.89
SRRM3-201ENST00000464752 PPARGC1BQ86YN6 1023 aaKnown RBP33.01■■■□□ 2.87
SRRM3-201ENST00000464752 FAM9AQ8IZU1 332 aaPredicted RBP32.99■■■□□ 2.87
SRRM3-201ENST00000464752 MROH2BQ7Z745 1585 aa32.94■■■□□ 2.86
SRRM3-201ENST00000464752 TRIM26Q12899 539 aaPredicted RBP32.87■■■□□ 2.85
SRRM3-201ENST00000464752 EHMT2Q96KQ7 1210 aa32.81■■■□□ 2.84
SRRM3-201ENST00000464752 WIZO95785 1651 aa32.76■■■□□ 2.83
SRRM3-201ENST00000464752 BAZ1AQ9NRL2 1556 aaPredicted RBP32.44■■■□□ 2.78
SRRM3-201ENST00000464752 EIF4G1Q04637 1599 aaKnown RBP32.21■■■□□ 2.75
SRRM3-201ENST00000464752 SMARCA4P51532 1647 aa32.17■■■□□ 2.74
SRRM3-201ENST00000464752 UNC13AQ9UPW8 1703 aa32.16■■■□□ 2.74
SRRM3-201ENST00000464752 TOP2AP11388 1531 aaKnown RBP32.15■■■□□ 2.74
SRRM3-201ENST00000464752 CCDC88BA6NC98 1476 aa32.13■■■□□ 2.73
SRRM3-201ENST00000464752 ABCC8Q09428 1581 aa32.09■■■□□ 2.73
SRRM3-201ENST00000464752 ZEB1P37275 1124 aaPredicted RBP32.07■■■□□ 2.72
SRRM3-201ENST00000464752 PABPN1Q86U42 306 aaKnown RBP eCLIP32.07■■■□□ 2.72
SRRM3-201ENST00000464752 SMARCA2P51531 1590 aa32.01■■■□□ 2.72
SRRM3-201ENST00000464752 SOGA1O94964 1423 aa31.83■■■□□ 2.69
SRRM3-201ENST00000464752 BICRAQ9NZM4 1560 aa31.79■■■□□ 2.68
SRRM3-201ENST00000464752 TTBK1Q5TCY1 1321 aaPredicted RBP31.73■■■□□ 2.67
SRRM3-201ENST00000464752 RUSC2Q8N2Y8 1516 aa31.69■■■□□ 2.66
SRRM3-201ENST00000464752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.68■■■□□ 2.66
SRRM3-201ENST00000464752 CSRNP3Q8WYN3 585 aa31.64■■■□□ 2.66
SRRM3-201ENST00000464752 CEP162Q5TB80 1403 aa31.64■■■□□ 2.66
SRRM3-201ENST00000464752 UBTFP17480 764 aaKnown RBP31.6■■■□□ 2.65
SRRM3-201ENST00000464752 TNIKQ9UKE5 1360 aa31.55■■■□□ 2.64
SRRM3-201ENST00000464752 CCER1Q8TC90 406 aaPredicted RBP31.54■■■□□ 2.64
SRRM3-201ENST00000464752 WRNQ14191 1432 aaPredicted RBP eCLIP31.51■■■□□ 2.64
SRRM3-201ENST00000464752 EEA1Q15075 1411 aa31.48■■■□□ 2.63
SRRM3-201ENST00000464752 PEG3Q9GZU2 1588 aa31.47■■■□□ 2.63
SRRM3-201ENST00000464752 ATAD2BQ9ULI0 1458 aa31.39■■■□□ 2.62
SRRM3-201ENST00000464752 GOLGA3Q08378 1498 aa31.34■■■□□ 2.61
SRRM3-201ENST00000464752 SYNJ1O43426 1573 aa31.33■■■□□ 2.61
SRRM3-201ENST00000464752 BAZ1BQ9UIG0 1483 aaKnown RBP31.31■■■□□ 2.6
SRRM3-201ENST00000464752 CEP164Q9UPV0 1460 aa31.15■■■□□ 2.58
SRRM3-201ENST00000464752 RANGAP1P46060 587 aaPredicted RBP31.1■■■□□ 2.57
SRRM3-201ENST00000464752 CLIP1P30622 1438 aa31.05■■■□□ 2.56
SRRM3-201ENST00000464752 KIF21BO75037 1637 aa31.05■■■□□ 2.56
SRRM3-201ENST00000464752 RAPGEF2Q9Y4G8 1499 aa31.01■■■□□ 2.56
SRRM3-201ENST00000464752 SCAF1Q9H7N4 1312 aaKnown RBP30.98■■■□□ 2.55
SRRM3-201ENST00000464752 HNRNPUL2Q1KMD3 747 aaKnown RBP30.95■■■□□ 2.55
SRRM3-201ENST00000464752 DIEXFQ68CQ4 756 aaKnown RBP30.91■■■□□ 2.54
SRRM3-201ENST00000464752 TOP2BQ02880 1626 aa30.88■■■□□ 2.53
SRRM3-201ENST00000464752 VPS8Q8N3P4 1428 aa30.87■■■□□ 2.53
SRRM3-201ENST00000464752 APLP2Q06481 763 aa30.83■■■□□ 2.53
SRRM3-201ENST00000464752 NCAPD3P42695 1498 aa30.73■■■□□ 2.51
SRRM3-201ENST00000464752 BIVM-ERCC5R4GMW8 1640 aa30.71■■■□□ 2.51
SRRM3-201ENST00000464752 NEUROD1Q13562 356 aa30.67■■■□□ 2.5
SRRM3-201ENST00000464752 HMGXB3Q12766 1538 aa30.65■■■□□ 2.5
SRRM3-201ENST00000464752 ZNF316A6NFI3 1004 aaPredicted RBP30.65■■■□□ 2.5
SRRM3-201ENST00000464752 CUX1P39880 1505 aa30.64■■■□□ 2.5
SRRM3-201ENST00000464752 ACIN1Q9UKV3 1341 aaKnown RBP30.64■■■□□ 2.5
SRRM3-201ENST00000464752 PRXQ9BXM0 1461 aa30.63■■■□□ 2.49
SRRM3-201ENST00000464752 ERICH3Q5RHP9 1530 aa30.54■■■□□ 2.48
SRRM3-201ENST00000464752 PELP1Q8IZL8 1130 aaKnown RBP30.52■■■□□ 2.48
SRRM3-201ENST00000464752 CFTRP13569 1480 aa30.52■■■□□ 2.48
SRRM3-201ENST00000464752 ARAP1Q96P48 1450 aa30.52■■■□□ 2.48
SRRM3-201ENST00000464752 KANK4Q5T7N3 995 aaPredicted RBP30.51■■■□□ 2.47
SRRM3-201ENST00000464752 KIF27Q86VH2 1401 aa30.5■■■□□ 2.47
SRRM3-201ENST00000464752 CENPBP07199 599 aaPredicted RBP30.42■■■□□ 2.46
SRRM3-201ENST00000464752 GTF3C3Q9Y5Q9 886 aa30.34■■■□□ 2.45
SRRM3-201ENST00000464752 MIER1Q8N108 512 aa30.29■■■□□ 2.44
SRRM3-201ENST00000464752 YTHDC1Q96MU7 727 aaKnown RBP30.28■■■□□ 2.44
SRRM3-201ENST00000464752 ARHGAP35Q9NRY4 1499 aa30.26■■■□□ 2.43
SRRM3-201ENST00000464752 CUX2O14529 1486 aa30.25■■■□□ 2.43
SRRM3-201ENST00000464752 IGF1RP08069 1367 aa30.23■■■□□ 2.43
SRRM3-201ENST00000464752 DHX57Q6P158 1386 aaKnown RBP30.22■■■□□ 2.43
SRRM3-201ENST00000464752 CADPSQ9ULU8 1353 aa30.22■■■□□ 2.43
SRRM3-201ENST00000464752 ITGAEP38570 1179 aa30.16■■■□□ 2.42
SRRM3-201ENST00000464752 RRBP1Q9P2E9 1410 aaKnown RBP30.14■■■□□ 2.42
SRRM3-201ENST00000464752 PRDM2Q13029 1718 aa30.11■■■□□ 2.41
SRRM3-201ENST00000464752 FGD5Q6ZNL6 1462 aa30.1■■■□□ 2.41
SRRM3-201ENST00000464752 CARMIL1Q5VZK9 1371 aa30.1■■■□□ 2.41
SRRM3-201ENST00000464752 CCNB3Q8WWL7 1395 aa30.08■■■□□ 2.41
SRRM3-201ENST00000464752 CLSPNQ9HAW4 1339 aa30.07■■■□□ 2.4
SRRM3-201ENST00000464752 P3H3Q8IVL6 736 aa29.99■■■□□ 2.39
SRRM3-201ENST00000464752 CC2D2AQ9P2K1 1620 aa29.97■■■□□ 2.39
SRRM3-201ENST00000464752 FANCD2Q9BXW9 1451 aa29.92■■■□□ 2.38
SRRM3-201ENST00000464752 ATP1B4Q9UN42 357 aaPredicted RBP29.9■■■□□ 2.38
SRRM3-201ENST00000464752 TIAM1Q13009 1591 aa29.87■■■□□ 2.37
SRRM3-201ENST00000464752 RAD54L2Q9Y4B4 1467 aa29.87■■■□□ 2.37
SRRM3-201ENST00000464752 RAB3GAP2Q9H2M9 1393 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms