RNA–Protein interactions for RNA: ENST00000464291.1

GLI3-205, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-205ENST00000464291 AEBP2Q6ZN18 517 aaPredicted RBP24.8■■□□□ 1.56
GLI3-205ENST00000464291 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
GLI3-205ENST00000464291 SENP3Q9H4L4 574 aaPredicted RBP21.21■□□□□ 0.99
GLI3-205ENST00000464291 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
GLI3-205ENST00000464291 FOXD1Q16676 465 aa19.89■□□□□ 0.77
GLI3-205ENST00000464291 POTEDQ86YR6 584 aa19.69■□□□□ 0.74
GLI3-205ENST00000464291 NISCHQ9Y2I1 1504 aa19.39■□□□□ 0.69
GLI3-205ENST00000464291 MSH5O43196 834 aa18.87■□□□□ 0.61
GLI3-205ENST00000464291 PIAS4Q8N2W9 510 aaPredicted RBP18.35■□□□□ 0.53
GLI3-205ENST00000464291 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
GLI3-205ENST00000464291 ADRA2BP18089 450 aa17.89■□□□□ 0.45
GLI3-205ENST00000464291 PLPPR3Q6T4P5 718 aa17.85■□□□□ 0.45
GLI3-205ENST00000464291 ABCC9O60706 1549 aa17.39■□□□□ 0.37
GLI3-205ENST00000464291 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
GLI3-205ENST00000464291 DMRT2Q9Y5R5 561 aa16.74■□□□□ 0.27
GLI3-205ENST00000464291 MAPK8IP2Q13387 824 aaPredicted RBP16.67■□□□□ 0.26
GLI3-205ENST00000464291 DCAF8L2P0C7V8 631 aa16.64■□□□□ 0.25
GLI3-205ENST00000464291 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
GLI3-205ENST00000464291 RB1CC1Q8TDY2 1594 aa16.54■□□□□ 0.24
GLI3-205ENST00000464291 NACADO15069 1562 aa16.41■□□□□ 0.22
GLI3-205ENST00000464291 SCAF1Q9H7N4 1312 aaKnown RBP16.34■□□□□ 0.21
GLI3-205ENST00000464291 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
GLI3-205ENST00000464291 DNAJC5BQ9UF47 199 aa16.21■□□□□ 0.19
GLI3-205ENST00000464291 UNC13AQ9UPW8 1703 aa16.15■□□□□ 0.18
GLI3-205ENST00000464291 MYO15BQ96JP2 1530 aa16.11■□□□□ 0.17
GLI3-205ENST00000464291 RNF39Q9H2S5 420 aa16.07■□□□□ 0.16
GLI3-205ENST00000464291 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
GLI3-205ENST00000464291 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
GLI3-205ENST00000464291 DCAF8L1A6NGE4 600 aa15.96■□□□□ 0.15
GLI3-205ENST00000464291 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
GLI3-205ENST00000464291 SCRIBQ14160 1630 aa15.9■□□□□ 0.14
GLI3-205ENST00000464291 HOXD11P31277 338 aaPredicted RBP15.85■□□□□ 0.13
GLI3-205ENST00000464291 C1QBPQ07021 282 aaKnown RBP15.76■□□□□ 0.11
GLI3-205ENST00000464291 SHROOM4Q9ULL8 1493 aa15.72■□□□□ 0.11
GLI3-205ENST00000464291 CC2D2AQ9P2K1 1620 aa15.66■□□□□ 0.1
GLI3-205ENST00000464291 CECR2Q9BXF3 1484 aa15.63■□□□□ 0.09
GLI3-205ENST00000464291 EIF4G1Q04637 1599 aaKnown RBP15.62■□□□□ 0.09
GLI3-205ENST00000464291 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
GLI3-205ENST00000464291 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
GLI3-205ENST00000464291 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
GLI3-205ENST00000464291 POTEHQ6S545 545 aa15.27■□□□□ 0.04
GLI3-205ENST00000464291 SMARCA4P51532 1647 aa15.12■□□□□ 0.01
GLI3-205ENST00000464291 NCAPD3P42695 1498 aa15.12■□□□□ 0.01
GLI3-205ENST00000464291 ATAD2BQ9ULI0 1458 aa15.11■□□□□ 0.01
GLI3-205ENST00000464291 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
GLI3-205ENST00000464291 BAZ1AQ9NRL2 1556 aaPredicted RBP15.07■□□□□ 0
GLI3-205ENST00000464291 ERCC6Q03468 1493 aa15.06■□□□□ 0
GLI3-205ENST00000464291 BAZ1BQ9UIG0 1483 aaKnown RBP15.02■□□□□ -0
GLI3-205ENST00000464291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
GLI3-205ENST00000464291 HMGXB3Q12766 1538 aa15□□□□□ -0.01
GLI3-205ENST00000464291 MROH2BQ7Z745 1585 aa14.95□□□□□ -0.02
GLI3-205ENST00000464291 NESP48681 1621 aa14.92□□□□□ -0.02
GLI3-205ENST00000464291 PEG3Q9GZU2 1588 aa14.89□□□□□ -0.03
GLI3-205ENST00000464291 CUX2O14529 1486 aa14.89□□□□□ -0.03
GLI3-205ENST00000464291 DNAJC5Q9H3Z4 198 aa14.86□□□□□ -0.03
GLI3-205ENST00000464291 WIZO95785 1651 aa14.82□□□□□ -0.04
GLI3-205ENST00000464291 LAMC3Q9Y6N6 1575 aa14.8□□□□□ -0.04
GLI3-205ENST00000464291 DSG3P32926 999 aa14.78□□□□□ -0.04
GLI3-205ENST00000464291 PDS5BQ9NTI5 1447 aa14.77□□□□□ -0.04
GLI3-205ENST00000464291 KIF21AQ7Z4S6 1674 aa14.74□□□□□ -0.05
GLI3-205ENST00000464291 CADPSQ9ULU8 1353 aa14.72□□□□□ -0.05
GLI3-205ENST00000464291 NCBP3Q53F19 620 aaKnown RBP14.69□□□□□ -0.06
GLI3-205ENST00000464291 THOC2Q8NI27 1593 aaKnown RBP14.68□□□□□ -0.06
GLI3-205ENST00000464291 SPINK5Q9NQ38 1064 aaPredicted RBP14.67□□□□□ -0.06
GLI3-205ENST00000464291 U3KPZ7 1027 aaPredicted RBP14.67□□□□□ -0.06
GLI3-205ENST00000464291 RSF1Q96T23 1441 aaPredicted RBP14.66□□□□□ -0.06
GLI3-205ENST00000464291 CAPN15O75808 1086 aa14.61□□□□□ -0.07
GLI3-205ENST00000464291 MRC2Q9UBG0 1479 aa14.59□□□□□ -0.07
GLI3-205ENST00000464291 TOP2AP11388 1531 aaKnown RBP14.59□□□□□ -0.07
GLI3-205ENST00000464291 CEP164Q9UPV0 1460 aa14.58□□□□□ -0.08
GLI3-205ENST00000464291 FANCD2Q9BXW9 1451 aa14.57□□□□□ -0.08
GLI3-205ENST00000464291 NPM3O75607 178 aaKnown RBP14.54□□□□□ -0.08
GLI3-205ENST00000464291 CFTRP13569 1480 aa14.51□□□□□ -0.09
GLI3-205ENST00000464291 WDR62O43379 1518 aa14.51□□□□□ -0.09
GLI3-205ENST00000464291 CCDC88BA6NC98 1476 aa14.46□□□□□ -0.09
GLI3-205ENST00000464291 PRDM2Q13029 1718 aa14.43□□□□□ -0.1
GLI3-205ENST00000464291 URB2Q14146 1524 aaKnown RBP14.41□□□□□ -0.1
GLI3-205ENST00000464291 TRIM41Q8WV44 630 aa14.38□□□□□ -0.11
GLI3-205ENST00000464291 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
GLI3-205ENST00000464291 SUPT5HO00267 1087 aaKnown RBP14.31□□□□□ -0.12
GLI3-205ENST00000464291 ABCC8Q09428 1581 aa14.28□□□□□ -0.12
GLI3-205ENST00000464291 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
GLI3-205ENST00000464291 IFT140Q96RY7 1462 aa14.26□□□□□ -0.13
GLI3-205ENST00000464291 ABCB7O75027 752 aa14.23□□□□□ -0.13
GLI3-205ENST00000464291 ZNF608Q9ULD9 1512 aaPredicted RBP14.23□□□□□ -0.13
GLI3-205ENST00000464291 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
GLI3-205ENST00000464291 FBLN2P98095 1184 aa14.21□□□□□ -0.13
GLI3-205ENST00000464291 TRHP20396 242 aaPredicted RBP14.2□□□□□ -0.14
GLI3-205ENST00000464291 ZNF219Q9P2Y4 722 aaPredicted RBP14.19□□□□□ -0.14
GLI3-205ENST00000464291 AQRO60306 1485 aaKnown RBP eCLIP14.15□□□□□ -0.14
GLI3-205ENST00000464291 SOGA1O94964 1423 aa14.15□□□□□ -0.14
GLI3-205ENST00000464291 EIF4G3O43432 1585 aaKnown RBP14.14□□□□□ -0.15
GLI3-205ENST00000464291 POLA1P09884 1462 aaPredicted RBP14.12□□□□□ -0.15
GLI3-205ENST00000464291 RAD54L2Q9Y4B4 1467 aa14.12□□□□□ -0.15
GLI3-205ENST00000464291 SLC4A2P04920 1241 aa14.11□□□□□ -0.15
GLI3-205ENST00000464291 APLP2Q06481 763 aa14.11□□□□□ -0.15
GLI3-205ENST00000464291 TDRD9Q8NDG6 1382 aaKnown RBP14.1□□□□□ -0.15
GLI3-205ENST00000464291 TARBP1Q13395 1621 aaKnown RBP14.1□□□□□ -0.15
GLI3-205ENST00000464291 CHRDL2Q6WN34 429 aa14.09□□□□□ -0.15
GLI3-205ENST00000464291 RBM42Q9BTD8 480 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms