RNA–Protein interactions for RNA: ENST00000464083.5

FGD2-204, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

TSL 2

Gene FGD2, Length 2,723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-204ENST00000464083 NISCHQ9Y2I1 1504 aa30.37■■■□□ 2.45
FGD2-204ENST00000464083 HRCP23327 699 aa27■■□□□ 1.91
FGD2-204ENST00000464083 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
FGD2-204ENST00000464083 SUPT5HO00267 1087 aaKnown RBP26.54■■□□□ 1.84
FGD2-204ENST00000464083 PPARGC1BQ86YN6 1023 aaKnown RBP26.5■■□□□ 1.83
FGD2-204ENST00000464083 PCGF6Q9BYE7 350 aa26.43■■□□□ 1.82
FGD2-204ENST00000464083 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
FGD2-204ENST00000464083 CHIC1Q5VXU3 224 aa26.16■■□□□ 1.78
FGD2-204ENST00000464083 CCDC180Q9P1Z9 1646 aa26.15■■□□□ 1.78
FGD2-204ENST00000464083 PELP1Q8IZL8 1130 aaKnown RBP25.98■■□□□ 1.75
FGD2-204ENST00000464083 DCAF1Q9Y4B6 1507 aa25.76■■□□□ 1.71
FGD2-204ENST00000464083 SCAF1Q9H7N4 1312 aaKnown RBP25.6■■□□□ 1.69
FGD2-204ENST00000464083 LOC105371045A0A1W2PR82 267 aa25.58■■□□□ 1.69
FGD2-204ENST00000464083 ZCCHC6Q5VYS8 1495 aaKnown RBP25.54■■□□□ 1.68
FGD2-204ENST00000464083 TRIM26Q12899 539 aaPredicted RBP25.53■■□□□ 1.68
FGD2-204ENST00000464083 DCAF8L2P0C7V8 631 aa25.43■■□□□ 1.66
FGD2-204ENST00000464083 ZEB1P37275 1124 aaPredicted RBP25.28■■□□□ 1.64
FGD2-204ENST00000464083 MYT1Q01538 1121 aa24.92■■□□□ 1.58
FGD2-204ENST00000464083 ACIN1Q9UKV3 1341 aaKnown RBP24.92■■□□□ 1.58
FGD2-204ENST00000464083 NEUROD1Q13562 356 aa24.88■■□□□ 1.57
FGD2-204ENST00000464083 ABCC9O60706 1549 aa24.87■■□□□ 1.57
FGD2-204ENST00000464083 GTF3C3Q9Y5Q9 886 aa24.72■■□□□ 1.55
FGD2-204ENST00000464083 FAM9AQ8IZU1 332 aaPredicted RBP24.56■■□□□ 1.52
FGD2-204ENST00000464083 CENPBP07199 599 aaPredicted RBP24.52■■□□□ 1.52
FGD2-204ENST00000464083 TRIM41Q8WV44 630 aa24.51■■□□□ 1.51
FGD2-204ENST00000464083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.5■■□□□ 1.51
FGD2-204ENST00000464083 EHMT2Q96KQ7 1210 aa24.48■■□□□ 1.51
FGD2-204ENST00000464083 DIEXFQ68CQ4 756 aaKnown RBP24.46■■□□□ 1.51
FGD2-204ENST00000464083 SCRIBQ14160 1630 aa24.42■■□□□ 1.5
FGD2-204ENST00000464083 CCER1Q8TC90 406 aaPredicted RBP24.4■■□□□ 1.5
FGD2-204ENST00000464083 NACADO15069 1562 aa24.35■■□□□ 1.49
FGD2-204ENST00000464083 RSF1Q96T23 1441 aaPredicted RBP24.19■■□□□ 1.46
FGD2-204ENST00000464083 RB1CC1Q8TDY2 1594 aa24.13■■□□□ 1.45
FGD2-204ENST00000464083 YTHDC1Q96MU7 727 aaKnown RBP24.09■■□□□ 1.45
FGD2-204ENST00000464083 ZNF316A6NFI3 1004 aaPredicted RBP23.97■■□□□ 1.43
FGD2-204ENST00000464083 TTBK1Q5TCY1 1321 aaPredicted RBP23.91■■□□□ 1.42
FGD2-204ENST00000464083 MIER1Q8N108 512 aa23.87■■□□□ 1.41
FGD2-204ENST00000464083 CECR2Q9BXF3 1484 aa23.74■■□□□ 1.39
FGD2-204ENST00000464083 UNC13AQ9UPW8 1703 aa23.72■■□□□ 1.39
FGD2-204ENST00000464083 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
FGD2-204ENST00000464083 PABPN1Q86U42 306 aaKnown RBP eCLIP23.64■■□□□ 1.37
FGD2-204ENST00000464083 MROH2BQ7Z745 1585 aa23.58■■□□□ 1.37
FGD2-204ENST00000464083 CEP162Q5TB80 1403 aa23.55■■□□□ 1.36
FGD2-204ENST00000464083 SUPT16HQ9Y5B9 1047 aaKnown RBP23.53■■□□□ 1.36
FGD2-204ENST00000464083 ANP32EQ9BTT0 268 aa23.48■■□□□ 1.35
FGD2-204ENST00000464083 BCL11AQ9H165 835 aa23.48■■□□□ 1.35
FGD2-204ENST00000464083 BICRAQ9NZM4 1560 aa23.47■■□□□ 1.35
FGD2-204ENST00000464083 TSHZ2Q9NRE2 1034 aa23.46■■□□□ 1.35
FGD2-204ENST00000464083 WIZO95785 1651 aa23.41■■□□□ 1.34
FGD2-204ENST00000464083 EIF4G1Q04637 1599 aaKnown RBP23.41■■□□□ 1.34
FGD2-204ENST00000464083 HNRNPUL2Q1KMD3 747 aaKnown RBP23.39■■□□□ 1.34
FGD2-204ENST00000464083 BAZ1AQ9NRL2 1556 aaPredicted RBP23.39■■□□□ 1.33
FGD2-204ENST00000464083 TNIKQ9UKE5 1360 aa23.37■■□□□ 1.33
FGD2-204ENST00000464083 CLSPNQ9HAW4 1339 aa23.37■■□□□ 1.33
FGD2-204ENST00000464083 CCDC88BA6NC98 1476 aa23.35■■□□□ 1.33
FGD2-204ENST00000464083 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
FGD2-204ENST00000464083 SOGA1O94964 1423 aa23.28■■□□□ 1.32
FGD2-204ENST00000464083 SMARCA4P51532 1647 aa23.28■■□□□ 1.32
FGD2-204ENST00000464083 CSRNP3Q8WYN3 585 aa23.27■■□□□ 1.32
FGD2-204ENST00000464083 UBTFP17480 764 aaKnown RBP23.24■■□□□ 1.31
FGD2-204ENST00000464083 RUSC2Q8N2Y8 1516 aa23.16■■□□□ 1.3
FGD2-204ENST00000464083 GOLGA3Q08378 1498 aa23.05■■□□□ 1.28
FGD2-204ENST00000464083 EEA1Q15075 1411 aa23.04■■□□□ 1.28
FGD2-204ENST00000464083 TOP2AP11388 1531 aaKnown RBP23.04■■□□□ 1.28
FGD2-204ENST00000464083 BCANQ96GW7 911 aa23.03■■□□□ 1.28
FGD2-204ENST00000464083 KCNH8Q96L42 1107 aa22.97■■□□□ 1.27
FGD2-204ENST00000464083 DHX57Q6P158 1386 aaKnown RBP22.95■■□□□ 1.26
FGD2-204ENST00000464083 CLIP1P30622 1438 aa22.9■■□□□ 1.26
FGD2-204ENST00000464083 FKBP8Q14318 412 aa22.89■■□□□ 1.25
FGD2-204ENST00000464083 SMARCA2P51531 1590 aa22.89■■□□□ 1.25
FGD2-204ENST00000464083 RBM19Q9Y4C8 960 aaKnown RBP22.88■■□□□ 1.25
FGD2-204ENST00000464083 VPS8Q8N3P4 1428 aa22.88■■□□□ 1.25
FGD2-204ENST00000464083 ATAD2BQ9ULI0 1458 aa22.86■■□□□ 1.25
FGD2-204ENST00000464083 PEG3Q9GZU2 1588 aa22.85■■□□□ 1.25
FGD2-204ENST00000464083 APLP2Q06481 763 aa22.84■■□□□ 1.25
FGD2-204ENST00000464083 CEP164Q9UPV0 1460 aa22.8■■□□□ 1.24
FGD2-204ENST00000464083 BAZ1BQ9UIG0 1483 aaKnown RBP22.77■■□□□ 1.24
FGD2-204ENST00000464083 RANGAP1P46060 587 aaPredicted RBP22.74■■□□□ 1.23
FGD2-204ENST00000464083 KIF21BO75037 1637 aa22.74■■□□□ 1.23
FGD2-204ENST00000464083 MSH5O43196 834 aa22.73■■□□□ 1.23
FGD2-204ENST00000464083 ITGAEP38570 1179 aa22.7■■□□□ 1.22
FGD2-204ENST00000464083 RAPGEF2Q9Y4G8 1499 aa22.62■■□□□ 1.21
FGD2-204ENST00000464083 NEFLP07196 543 aa22.62■■□□□ 1.21
FGD2-204ENST00000464083 KANK4Q5T7N3 995 aaPredicted RBP22.57■■□□□ 1.2
FGD2-204ENST00000464083 SYNJ1O43426 1573 aa22.57■■□□□ 1.2
FGD2-204ENST00000464083 DDX10Q13206 875 aaKnown RBP22.57■■□□□ 1.2
FGD2-204ENST00000464083 NCAPD3P42695 1498 aa22.53■■□□□ 1.2
FGD2-204ENST00000464083 TRIM52Q96A61 297 aa22.53■■□□□ 1.2
FGD2-204ENST00000464083 CUX2O14529 1486 aa22.48■■□□□ 1.19
FGD2-204ENST00000464083 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
FGD2-204ENST00000464083 PRKCSHP14314 528 aaPredicted RBP22.47■■□□□ 1.19
FGD2-204ENST00000464083 RRBP1Q9P2E9 1410 aaKnown RBP22.47■■□□□ 1.19
FGD2-204ENST00000464083 FANCIQ9NVI1 1328 aa22.45■■□□□ 1.18
FGD2-204ENST00000464083 PPP1R15AO75807 674 aaPredicted RBP22.43■■□□□ 1.18
FGD2-204ENST00000464083 MAPKBP1O60336 1514 aa22.42■■□□□ 1.18
FGD2-204ENST00000464083 ARAP1Q96P48 1450 aa22.42■■□□□ 1.18
FGD2-204ENST00000464083 ERICH6Q7L0X2 663 aa22.4■■□□□ 1.18
FGD2-204ENST00000464083 WDR97A6NE52 1622 aa22.39■■□□□ 1.17
FGD2-204ENST00000464083 CC2D2AQ9P2K1 1620 aa22.38■■□□□ 1.17
FGD2-204ENST00000464083 CCNB3Q8WWL7 1395 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms