RNA–Protein interactions for RNA: ENST00000463533.1

ANKRD28-208, Transcript of ankyrin repeat domain 28, humanhuman

TSL 3

Gene ANKRD28, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-208ENST00000463533 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
ANKRD28-208ENST00000463533 CHIC1Q5VXU3 224 aa24.69■■□□□ 1.54
ANKRD28-208ENST00000463533 SENP3Q9H4L4 574 aaPredicted RBP21.74■■□□□ 1.07
ANKRD28-208ENST00000463533 PHF23Q9BUL5 403 aaPredicted RBP21.66■■□□□ 1.06
ANKRD28-208ENST00000463533 FOXD1Q16676 465 aa20.18■□□□□ 0.82
ANKRD28-208ENST00000463533 NISCHQ9Y2I1 1504 aa19.94■□□□□ 0.78
ANKRD28-208ENST00000463533 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
ANKRD28-208ENST00000463533 PPP6R1Q9UPN7 881 aa19.19■□□□□ 0.66
ANKRD28-208ENST00000463533 ADRA2BP18089 450 aa19.16■□□□□ 0.66
ANKRD28-208ENST00000463533 PIAS4Q8N2W9 510 aaPredicted RBP18.97■□□□□ 0.63
ANKRD28-208ENST00000463533 MSH5O43196 834 aa18.76■□□□□ 0.59
ANKRD28-208ENST00000463533 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
ANKRD28-208ENST00000463533 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
ANKRD28-208ENST00000463533 PPP4R3CPQ6ZMV5 832 aa17.53■□□□□ 0.4
ANKRD28-208ENST00000463533 POTEDQ86YR6 584 aa17.52■□□□□ 0.4
ANKRD28-208ENST00000463533 MAPK8IP2Q13387 824 aaPredicted RBP17.46■□□□□ 0.39
ANKRD28-208ENST00000463533 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
ANKRD28-208ENST00000463533 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
ANKRD28-208ENST00000463533 ABCC9O60706 1549 aa17.06■□□□□ 0.32
ANKRD28-208ENST00000463533 NCBP3Q53F19 620 aaKnown RBP17.02■□□□□ 0.32
ANKRD28-208ENST00000463533 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
ANKRD28-208ENST00000463533 RNF216Q9NWF9 866 aaPredicted RBP16.84■□□□□ 0.29
ANKRD28-208ENST00000463533 KCNA4P22459 653 aa16.79■□□□□ 0.28
ANKRD28-208ENST00000463533 NPM3O75607 178 aaKnown RBP16.73■□□□□ 0.27
ANKRD28-208ENST00000463533 DCAF8L2P0C7V8 631 aa16.65■□□□□ 0.26
ANKRD28-208ENST00000463533 ZCCHC6Q5VYS8 1495 aaKnown RBP16.65■□□□□ 0.26
ANKRD28-208ENST00000463533 DCAF8L1A6NGE4 600 aa16.56■□□□□ 0.24
ANKRD28-208ENST00000463533 NACADO15069 1562 aa16.5■□□□□ 0.23
ANKRD28-208ENST00000463533 RB1CC1Q8TDY2 1594 aa16.47■□□□□ 0.23
ANKRD28-208ENST00000463533 DCAF1Q9Y4B6 1507 aa16.46■□□□□ 0.23
ANKRD28-208ENST00000463533 MYO15BQ96JP2 1530 aa16.43■□□□□ 0.22
ANKRD28-208ENST00000463533 DNAJC5BQ9UF47 199 aa16.33■□□□□ 0.2
ANKRD28-208ENST00000463533 UNC13AQ9UPW8 1703 aa16.18■□□□□ 0.18
ANKRD28-208ENST00000463533 SCRIBQ14160 1630 aa16.15■□□□□ 0.18
ANKRD28-208ENST00000463533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.04■□□□□ 0.16
ANKRD28-208ENST00000463533 RNF39Q9H2S5 420 aa16.02■□□□□ 0.16
ANKRD28-208ENST00000463533 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
ANKRD28-208ENST00000463533 BICRAQ9NZM4 1560 aa15.99■□□□□ 0.15
ANKRD28-208ENST00000463533 SHROOM4Q9ULL8 1493 aa15.98■□□□□ 0.15
ANKRD28-208ENST00000463533 SLC4A1APQ9BWU0 796 aaKnown RBP15.96■□□□□ 0.15
ANKRD28-208ENST00000463533 SLC4A2P04920 1241 aa15.86■□□□□ 0.13
ANKRD28-208ENST00000463533 C1QBPQ07021 282 aaKnown RBP15.84■□□□□ 0.13
ANKRD28-208ENST00000463533 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
ANKRD28-208ENST00000463533 U3KPZ7 1027 aaPredicted RBP15.74■□□□□ 0.11
ANKRD28-208ENST00000463533 FOXD4L1Q9NU39 408 aa15.56■□□□□ 0.08
ANKRD28-208ENST00000463533 CECR2Q9BXF3 1484 aa15.54■□□□□ 0.08
ANKRD28-208ENST00000463533 EIF4G1Q04637 1599 aaKnown RBP15.53■□□□□ 0.08
ANKRD28-208ENST00000463533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
ANKRD28-208ENST00000463533 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
ANKRD28-208ENST00000463533 MYCNP04198 464 aaPredicted RBP15.49■□□□□ 0.07
ANKRD28-208ENST00000463533 SMARCA4P51532 1647 aa15.44■□□□□ 0.06
ANKRD28-208ENST00000463533 CC2D2AQ9P2K1 1620 aa15.43■□□□□ 0.06
ANKRD28-208ENST00000463533 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
ANKRD28-208ENST00000463533 ZBTB22O15209 634 aa15.42■□□□□ 0.06
ANKRD28-208ENST00000463533 SAMD1Q6SPF0 538 aaPredicted RBP15.42■□□□□ 0.06
ANKRD28-208ENST00000463533 APLP2Q06481 763 aa15.41■□□□□ 0.06
ANKRD28-208ENST00000463533 MROH2BQ7Z745 1585 aa15.41■□□□□ 0.06
ANKRD28-208ENST00000463533 SPINK5Q9NQ38 1064 aaPredicted RBP15.37■□□□□ 0.05
ANKRD28-208ENST00000463533 CAPN15O75808 1086 aa15.34■□□□□ 0.05
ANKRD28-208ENST00000463533 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
ANKRD28-208ENST00000463533 WIZO95785 1651 aa15.28■□□□□ 0.04
ANKRD28-208ENST00000463533 ATAD2BQ9ULI0 1458 aa15.27■□□□□ 0.04
ANKRD28-208ENST00000463533 SMARCA2P51531 1590 aa15.26■□□□□ 0.03
ANKRD28-208ENST00000463533 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
ANKRD28-208ENST00000463533 NCAPD3P42695 1498 aa15.21■□□□□ 0.03
ANKRD28-208ENST00000463533 ZNF219Q9P2Y4 722 aaPredicted RBP15.21■□□□□ 0.03
ANKRD28-208ENST00000463533 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
ANKRD28-208ENST00000463533 BAZ1BQ9UIG0 1483 aaKnown RBP15.17■□□□□ 0.02
ANKRD28-208ENST00000463533 SUPT5HO00267 1087 aaKnown RBP15.16■□□□□ 0.02
ANKRD28-208ENST00000463533 EHMT2Q96KQ7 1210 aa15.16■□□□□ 0.02
ANKRD28-208ENST00000463533 DSG3P32926 999 aa15.15■□□□□ 0.02
ANKRD28-208ENST00000463533 HMGXB3Q12766 1538 aa15.15■□□□□ 0.02
ANKRD28-208ENST00000463533 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
ANKRD28-208ENST00000463533 TOP2AP11388 1531 aaKnown RBP15.07■□□□□ 0
ANKRD28-208ENST00000463533 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
ANKRD28-208ENST00000463533 ATF5Q9Y2D1 282 aaPredicted RBP15.05■□□□□ -0
ANKRD28-208ENST00000463533 ABCB7O75027 752 aa15.01□□□□□ -0.01
ANKRD28-208ENST00000463533 CCDC88BA6NC98 1476 aa14.92□□□□□ -0.02
ANKRD28-208ENST00000463533 POLA2Q14181 598 aa14.9□□□□□ -0.02
ANKRD28-208ENST00000463533 NESP48681 1621 aa14.84□□□□□ -0.03
ANKRD28-208ENST00000463533 CADPSQ9ULU8 1353 aa14.8□□□□□ -0.04
ANKRD28-208ENST00000463533 LAMC3Q9Y6N6 1575 aa14.78□□□□□ -0.04
ANKRD28-208ENST00000463533 CFTRP13569 1480 aa14.76□□□□□ -0.05
ANKRD28-208ENST00000463533 PRDM2Q13029 1718 aa14.72□□□□□ -0.05
ANKRD28-208ENST00000463533 KIF21AQ7Z4S6 1674 aa14.69□□□□□ -0.06
ANKRD28-208ENST00000463533 PDS5BQ9NTI5 1447 aa14.66□□□□□ -0.06
ANKRD28-208ENST00000463533 ERCC6Q03468 1493 aa14.66□□□□□ -0.06
ANKRD28-208ENST00000463533 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
ANKRD28-208ENST00000463533 FANCD2Q9BXW9 1451 aa14.63□□□□□ -0.07
ANKRD28-208ENST00000463533 CEP164Q9UPV0 1460 aa14.59□□□□□ -0.07
ANKRD28-208ENST00000463533 THOC2Q8NI27 1593 aaKnown RBP14.53□□□□□ -0.08
ANKRD28-208ENST00000463533 MRC2Q9UBG0 1479 aa14.52□□□□□ -0.08
ANKRD28-208ENST00000463533 FBLN2P98095 1184 aa14.49□□□□□ -0.09
ANKRD28-208ENST00000463533 URB2Q14146 1524 aaKnown RBP14.49□□□□□ -0.09
ANKRD28-208ENST00000463533 RBM42Q9BTD8 480 aaKnown RBP14.48□□□□□ -0.09
ANKRD28-208ENST00000463533 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
ANKRD28-208ENST00000463533 WDR62O43379 1518 aa14.46□□□□□ -0.1
ANKRD28-208ENST00000463533 TOPBP1Q92547 1522 aa14.44□□□□□ -0.1
ANKRD28-208ENST00000463533 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
ANKRD28-208ENST00000463533 CUX1P39880 1505 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms