RNA–Protein interactions for RNA: ENST00000463139.5

PSMD6-203, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 2

Gene PSMD6, Length 2,621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-203ENST00000463139 NISCHQ9Y2I1 1504 aa16.97■□□□□ 0.31
PSMD6-203ENST00000463139 CCDC180Q9P1Z9 1646 aa14.52□□□□□ -0.09
PSMD6-203ENST00000463139 ZCCHC6Q5VYS8 1495 aaKnown RBP14.42□□□□□ -0.1
PSMD6-203ENST00000463139 DCAF1Q9Y4B6 1507 aa14.15□□□□□ -0.14
PSMD6-203ENST00000463139 PELP1Q8IZL8 1130 aaKnown RBP14.13□□□□□ -0.15
PSMD6-203ENST00000463139 SHROOM4Q9ULL8 1493 aa14.11□□□□□ -0.15
PSMD6-203ENST00000463139 MYT1Q01538 1121 aa14.05□□□□□ -0.16
PSMD6-203ENST00000463139 SUPT5HO00267 1087 aaKnown RBP13.93□□□□□ -0.18
PSMD6-203ENST00000463139 CHIC1Q5VXU3 224 aa13.83□□□□□ -0.2
PSMD6-203ENST00000463139 MYO15BQ96JP2 1530 aa13.75□□□□□ -0.21
PSMD6-203ENST00000463139 SLC24A1O60721 1099 aa13.72□□□□□ -0.21
PSMD6-203ENST00000463139 HRCP23327 699 aa13.67□□□□□ -0.22
PSMD6-203ENST00000463139 TTBK1Q5TCY1 1321 aaPredicted RBP13.63□□□□□ -0.23
PSMD6-203ENST00000463139 ABCC9O60706 1549 aa13.62□□□□□ -0.23
PSMD6-203ENST00000463139 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
PSMD6-203ENST00000463139 PRKCSHP14314 528 aaPredicted RBP13.51□□□□□ -0.25
PSMD6-203ENST00000463139 RSF1Q96T23 1441 aaPredicted RBP13.41□□□□□ -0.26
PSMD6-203ENST00000463139 RB1CC1Q8TDY2 1594 aa13.38□□□□□ -0.27
PSMD6-203ENST00000463139 PCGF6Q9BYE7 350 aa13.36□□□□□ -0.27
PSMD6-203ENST00000463139 NACADO15069 1562 aa13.35□□□□□ -0.27
PSMD6-203ENST00000463139 SCRIBQ14160 1630 aa13.3□□□□□ -0.28
PSMD6-203ENST00000463139 TRIM26Q12899 539 aaPredicted RBP13.3□□□□□ -0.28
PSMD6-203ENST00000463139 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
PSMD6-203ENST00000463139 LOC105371045A0A1W2PR82 267 aa13.22□□□□□ -0.29
PSMD6-203ENST00000463139 ZEB1P37275 1124 aaPredicted RBP13.22□□□□□ -0.29
PSMD6-203ENST00000463139 APLP2Q06481 763 aa13.18□□□□□ -0.3
PSMD6-203ENST00000463139 TRIM41Q8WV44 630 aa13.12□□□□□ -0.31
PSMD6-203ENST00000463139 BAZ1AQ9NRL2 1556 aaPredicted RBP13.1□□□□□ -0.31
PSMD6-203ENST00000463139 MROH2BQ7Z745 1585 aa13.09□□□□□ -0.31
PSMD6-203ENST00000463139 EIF4G1Q04637 1599 aaKnown RBP13.07□□□□□ -0.32
PSMD6-203ENST00000463139 PPARGC1BQ86YN6 1023 aaKnown RBP13.06□□□□□ -0.32
PSMD6-203ENST00000463139 CECR2Q9BXF3 1484 aa13.05□□□□□ -0.32
PSMD6-203ENST00000463139 WIZO95785 1651 aa12.98□□□□□ -0.33
PSMD6-203ENST00000463139 TOP2AP11388 1531 aaKnown RBP12.96□□□□□ -0.34
PSMD6-203ENST00000463139 DAXXQ9UER7 740 aaPredicted RBP12.92□□□□□ -0.34
PSMD6-203ENST00000463139 WRNQ14191 1432 aaPredicted RBP eCLIP12.91□□□□□ -0.34
PSMD6-203ENST00000463139 SMARCA4P51532 1647 aa12.88□□□□□ -0.35
PSMD6-203ENST00000463139 EEA1Q15075 1411 aa12.88□□□□□ -0.35
PSMD6-203ENST00000463139 BCL11AQ9H165 835 aa12.85□□□□□ -0.35
PSMD6-203ENST00000463139 SMARCA2P51531 1590 aa12.83□□□□□ -0.36
PSMD6-203ENST00000463139 CCDC88BA6NC98 1476 aa12.79□□□□□ -0.36
PSMD6-203ENST00000463139 FAM9AQ8IZU1 332 aaPredicted RBP12.78□□□□□ -0.36
PSMD6-203ENST00000463139 PEG3Q9GZU2 1588 aa12.78□□□□□ -0.36
PSMD6-203ENST00000463139 TNIKQ9UKE5 1360 aa12.78□□□□□ -0.36
PSMD6-203ENST00000463139 UNC13AQ9UPW8 1703 aa12.72□□□□□ -0.37
PSMD6-203ENST00000463139 CEP162Q5TB80 1403 aa12.69□□□□□ -0.38
PSMD6-203ENST00000463139 ABCC8Q09428 1581 aa12.67□□□□□ -0.38
PSMD6-203ENST00000463139 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
PSMD6-203ENST00000463139 AEBP2Q6ZN18 517 aaPredicted RBP12.65□□□□□ -0.38
PSMD6-203ENST00000463139 KIF21BO75037 1637 aa12.63□□□□□ -0.39
PSMD6-203ENST00000463139 CSRNP3Q8WYN3 585 aa12.61□□□□□ -0.39
PSMD6-203ENST00000463139 BICRAQ9NZM4 1560 aa12.61□□□□□ -0.39
PSMD6-203ENST00000463139 SOGA1O94964 1423 aa12.61□□□□□ -0.39
PSMD6-203ENST00000463139 CEP164Q9UPV0 1460 aa12.59□□□□□ -0.39
PSMD6-203ENST00000463139 BAZ1BQ9UIG0 1483 aaKnown RBP12.59□□□□□ -0.39
PSMD6-203ENST00000463139 CCER1Q8TC90 406 aaPredicted RBP12.58□□□□□ -0.4
PSMD6-203ENST00000463139 SCAF1Q9H7N4 1312 aaKnown RBP12.55□□□□□ -0.4
PSMD6-203ENST00000463139 EIF5BO60841 1220 aaKnown RBP12.53□□□□□ -0.4
PSMD6-203ENST00000463139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.51□□□□□ -0.41
PSMD6-203ENST00000463139 ATAD2BQ9ULI0 1458 aa12.5□□□□□ -0.41
PSMD6-203ENST00000463139 ACIN1Q9UKV3 1341 aaKnown RBP12.5□□□□□ -0.41
PSMD6-203ENST00000463139 SYNJ1O43426 1573 aa12.49□□□□□ -0.41
PSMD6-203ENST00000463139 RUSC2Q8N2Y8 1516 aa12.49□□□□□ -0.41
PSMD6-203ENST00000463139 VPS8Q8N3P4 1428 aa12.47□□□□□ -0.41
PSMD6-203ENST00000463139 EHMT2Q96KQ7 1210 aa12.47□□□□□ -0.41
PSMD6-203ENST00000463139 CENPBP07199 599 aaPredicted RBP12.45□□□□□ -0.42
PSMD6-203ENST00000463139 DIEXFQ68CQ4 756 aaKnown RBP12.45□□□□□ -0.42
PSMD6-203ENST00000463139 TOP2BQ02880 1626 aa12.44□□□□□ -0.42
PSMD6-203ENST00000463139 CLIP1P30622 1438 aa12.44□□□□□ -0.42
PSMD6-203ENST00000463139 ERICH3Q5RHP9 1530 aa12.43□□□□□ -0.42
PSMD6-203ENST00000463139 BIVM-ERCC5R4GMW8 1640 aa12.43□□□□□ -0.42
PSMD6-203ENST00000463139 UBTFP17480 764 aaKnown RBP12.42□□□□□ -0.42
PSMD6-203ENST00000463139 ZNF316A6NFI3 1004 aaPredicted RBP12.41□□□□□ -0.42
PSMD6-203ENST00000463139 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
PSMD6-203ENST00000463139 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
PSMD6-203ENST00000463139 PRXQ9BXM0 1461 aa12.35□□□□□ -0.43
PSMD6-203ENST00000463139 NEUROD1Q13562 356 aa12.35□□□□□ -0.43
PSMD6-203ENST00000463139 RAPGEF2Q9Y4G8 1499 aa12.34□□□□□ -0.43
PSMD6-203ENST00000463139 NCAPD3P42695 1498 aa12.31□□□□□ -0.44
PSMD6-203ENST00000463139 CUX2O14529 1486 aa12.28□□□□□ -0.44
PSMD6-203ENST00000463139 PABPN1Q86U42 306 aaKnown RBP eCLIP12.28□□□□□ -0.44
PSMD6-203ENST00000463139 PLEKHG5O94827 1062 aa12.26□□□□□ -0.45
PSMD6-203ENST00000463139 ARAP1Q96P48 1450 aa12.25□□□□□ -0.45
PSMD6-203ENST00000463139 RRBP1Q9P2E9 1410 aaKnown RBP12.25□□□□□ -0.45
PSMD6-203ENST00000463139 GTF3C3Q9Y5Q9 886 aa12.24□□□□□ -0.45
PSMD6-203ENST00000463139 MAP3K1Q13233 1512 aa12.23□□□□□ -0.45
PSMD6-203ENST00000463139 KIF27Q86VH2 1401 aa12.22□□□□□ -0.45
PSMD6-203ENST00000463139 CFTRP13569 1480 aa12.22□□□□□ -0.45
PSMD6-203ENST00000463139 CUX1P39880 1505 aa12.2□□□□□ -0.46
PSMD6-203ENST00000463139 PRDM2Q13029 1718 aa12.19□□□□□ -0.46
PSMD6-203ENST00000463139 DHX57Q6P158 1386 aaKnown RBP12.18□□□□□ -0.46
PSMD6-203ENST00000463139 HNRNPUL2Q1KMD3 747 aaKnown RBP12.16□□□□□ -0.46
PSMD6-203ENST00000463139 MIER1Q8N108 512 aa12.11□□□□□ -0.47
PSMD6-203ENST00000463139 ARHGAP35Q9NRY4 1499 aa12.11□□□□□ -0.47
PSMD6-203ENST00000463139 CCNB3Q8WWL7 1395 aa12.09□□□□□ -0.47
PSMD6-203ENST00000463139 NCBP3Q53F19 620 aaKnown RBP12.07□□□□□ -0.48
PSMD6-203ENST00000463139 TIAM1Q13009 1591 aa12.06□□□□□ -0.48
PSMD6-203ENST00000463139 IGF1RP08069 1367 aa12.04□□□□□ -0.48
PSMD6-203ENST00000463139 KANK4Q5T7N3 995 aaPredicted RBP12.03□□□□□ -0.48
PSMD6-203ENST00000463139 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 207.3 ms