RNA–Protein interactions for RNA: ENST00000460482.6

CCDC180-201, Transcript of coiled-coil domain containing 180, humanhuman

TSL 2

Gene CCDC180, Length 3,040 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-201ENST00000460482 NISCHQ9Y2I1 1504 aa24.74■■□□□ 1.55
CCDC180-201ENST00000460482 HRCP23327 699 aa21.32■■□□□ 1
CCDC180-201ENST00000460482 SHROOM4Q9ULL8 1493 aa21.16■□□□□ 0.98
CCDC180-201ENST00000460482 CCDC180Q9P1Z9 1646 aa21.06■□□□□ 0.96
CCDC180-201ENST00000460482 ZCCHC6Q5VYS8 1495 aaKnown RBP20.93■□□□□ 0.94
CCDC180-201ENST00000460482 PPARGC1BQ86YN6 1023 aaKnown RBP20.83■□□□□ 0.93
CCDC180-201ENST00000460482 PCGF6Q9BYE7 350 aa20.83■□□□□ 0.92
CCDC180-201ENST00000460482 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
CCDC180-201ENST00000460482 PELP1Q8IZL8 1130 aaKnown RBP20.72■□□□□ 0.91
CCDC180-201ENST00000460482 MYO15BQ96JP2 1530 aa20.71■□□□□ 0.91
CCDC180-201ENST00000460482 DCAF8L2P0C7V8 631 aa20.56■□□□□ 0.88
CCDC180-201ENST00000460482 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
CCDC180-201ENST00000460482 DCAF1Q9Y4B6 1507 aa20.33■□□□□ 0.84
CCDC180-201ENST00000460482 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
CCDC180-201ENST00000460482 TRIM26Q12899 539 aaPredicted RBP20.15■□□□□ 0.82
CCDC180-201ENST00000460482 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
CCDC180-201ENST00000460482 ZEB1P37275 1124 aaPredicted RBP20.03■□□□□ 0.8
CCDC180-201ENST00000460482 MYT1Q01538 1121 aa19.94■□□□□ 0.78
CCDC180-201ENST00000460482 ABCC9O60706 1549 aa19.78■□□□□ 0.76
CCDC180-201ENST00000460482 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
CCDC180-201ENST00000460482 ACIN1Q9UKV3 1341 aaKnown RBP19.7■□□□□ 0.74
CCDC180-201ENST00000460482 NEUROD1Q13562 356 aa19.62■□□□□ 0.73
CCDC180-201ENST00000460482 RSF1Q96T23 1441 aaPredicted RBP19.58■□□□□ 0.72
CCDC180-201ENST00000460482 GTF3C3Q9Y5Q9 886 aa19.53■□□□□ 0.72
CCDC180-201ENST00000460482 CENPBP07199 599 aaPredicted RBP19.44■□□□□ 0.7
CCDC180-201ENST00000460482 NACADO15069 1562 aa19.44■□□□□ 0.7
CCDC180-201ENST00000460482 RB1CC1Q8TDY2 1594 aa19.43■□□□□ 0.7
CCDC180-201ENST00000460482 DIEXFQ68CQ4 756 aaKnown RBP19.31■□□□□ 0.68
CCDC180-201ENST00000460482 CECR2Q9BXF3 1484 aa19.31■□□□□ 0.68
CCDC180-201ENST00000460482 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
CCDC180-201ENST00000460482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.26■□□□□ 0.67
CCDC180-201ENST00000460482 MROH2BQ7Z745 1585 aa19.25■□□□□ 0.67
CCDC180-201ENST00000460482 CCER1Q8TC90 406 aaPredicted RBP19.24■□□□□ 0.67
CCDC180-201ENST00000460482 FAM9AQ8IZU1 332 aaPredicted RBP19.24■□□□□ 0.67
CCDC180-201ENST00000460482 WIZO95785 1651 aa19.17■□□□□ 0.66
CCDC180-201ENST00000460482 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
CCDC180-201ENST00000460482 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
CCDC180-201ENST00000460482 YTHDC1Q96MU7 727 aaKnown RBP18.98■□□□□ 0.63
CCDC180-201ENST00000460482 ZNF316A6NFI3 1004 aaPredicted RBP18.92■□□□□ 0.62
CCDC180-201ENST00000460482 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
CCDC180-201ENST00000460482 UNC13AQ9UPW8 1703 aa18.89■□□□□ 0.62
CCDC180-201ENST00000460482 SMARCA4P51532 1647 aa18.87■□□□□ 0.61
CCDC180-201ENST00000460482 TOP2AP11388 1531 aaKnown RBP18.85■□□□□ 0.61
CCDC180-201ENST00000460482 MIER1Q8N108 512 aa18.79■□□□□ 0.6
CCDC180-201ENST00000460482 CCDC88BA6NC98 1476 aa18.76■□□□□ 0.59
CCDC180-201ENST00000460482 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
CCDC180-201ENST00000460482 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
CCDC180-201ENST00000460482 TTBK1Q5TCY1 1321 aaPredicted RBP18.73■□□□□ 0.59
CCDC180-201ENST00000460482 WRNQ14191 1432 aaPredicted RBP eCLIP18.66■□□□□ 0.58
CCDC180-201ENST00000460482 PABPN1Q86U42 306 aaKnown RBP eCLIP18.65■□□□□ 0.58
CCDC180-201ENST00000460482 BCL11AQ9H165 835 aa18.62■□□□□ 0.57
CCDC180-201ENST00000460482 ANP32EQ9BTT0 268 aa18.61■□□□□ 0.57
CCDC180-201ENST00000460482 BICRAQ9NZM4 1560 aa18.61■□□□□ 0.57
CCDC180-201ENST00000460482 CLSPNQ9HAW4 1339 aa18.58■□□□□ 0.56
CCDC180-201ENST00000460482 SUPT16HQ9Y5B9 1047 aaKnown RBP18.58■□□□□ 0.56
CCDC180-201ENST00000460482 SOGA1O94964 1423 aa18.55■□□□□ 0.56
CCDC180-201ENST00000460482 CEP162Q5TB80 1403 aa18.52■□□□□ 0.56
CCDC180-201ENST00000460482 TSHZ2Q9NRE2 1034 aa18.52■□□□□ 0.55
CCDC180-201ENST00000460482 PEG3Q9GZU2 1588 aa18.46■□□□□ 0.55
CCDC180-201ENST00000460482 RUSC2Q8N2Y8 1516 aa18.46■□□□□ 0.55
CCDC180-201ENST00000460482 EEA1Q15075 1411 aa18.45■□□□□ 0.54
CCDC180-201ENST00000460482 CSRNP3Q8WYN3 585 aa18.43■□□□□ 0.54
CCDC180-201ENST00000460482 TNIKQ9UKE5 1360 aa18.43■□□□□ 0.54
CCDC180-201ENST00000460482 UBTFP17480 764 aaKnown RBP18.4■□□□□ 0.54
CCDC180-201ENST00000460482 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
CCDC180-201ENST00000460482 GOLGA3Q08378 1498 aa18.35■□□□□ 0.53
CCDC180-201ENST00000460482 ATAD2BQ9ULI0 1458 aa18.35■□□□□ 0.53
CCDC180-201ENST00000460482 SYNJ1O43426 1573 aa18.34■□□□□ 0.53
CCDC180-201ENST00000460482 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.52
CCDC180-201ENST00000460482 CEP164Q9UPV0 1460 aa18.24■□□□□ 0.51
CCDC180-201ENST00000460482 KIF21BO75037 1637 aa18.22■□□□□ 0.51
CCDC180-201ENST00000460482 CLIP1P30622 1438 aa18.14■□□□□ 0.49
CCDC180-201ENST00000460482 BCANQ96GW7 911 aa18.14■□□□□ 0.49
CCDC180-201ENST00000460482 RAPGEF2Q9Y4G8 1499 aa18.1■□□□□ 0.49
CCDC180-201ENST00000460482 TOP2BQ02880 1626 aa18.1■□□□□ 0.49
CCDC180-201ENST00000460482 RBM19Q9Y4C8 960 aaKnown RBP18.08■□□□□ 0.49
CCDC180-201ENST00000460482 RANGAP1P46060 587 aaPredicted RBP18.07■□□□□ 0.48
CCDC180-201ENST00000460482 FKBP8Q14318 412 aa18.06■□□□□ 0.48
CCDC180-201ENST00000460482 VPS8Q8N3P4 1428 aa18.05■□□□□ 0.48
CCDC180-201ENST00000460482 DHX57Q6P158 1386 aaKnown RBP18.05■□□□□ 0.48
CCDC180-201ENST00000460482 BIVM-ERCC5R4GMW8 1640 aa18.04■□□□□ 0.48
CCDC180-201ENST00000460482 KCNH8Q96L42 1107 aa18.04■□□□□ 0.48
CCDC180-201ENST00000460482 APLP2Q06481 763 aa18.02■□□□□ 0.48
CCDC180-201ENST00000460482 HMGXB3Q12766 1538 aa18■□□□□ 0.47
CCDC180-201ENST00000460482 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
CCDC180-201ENST00000460482 CUX1P39880 1505 aa17.92■□□□□ 0.46
CCDC180-201ENST00000460482 NEFLP07196 543 aa17.92■□□□□ 0.46
CCDC180-201ENST00000460482 ERICH3Q5RHP9 1530 aa17.92■□□□□ 0.46
CCDC180-201ENST00000460482 MSH5O43196 834 aa17.91■□□□□ 0.46
CCDC180-201ENST00000460482 PRXQ9BXM0 1461 aa17.9■□□□□ 0.46
CCDC180-201ENST00000460482 ITGAEP38570 1179 aa17.88■□□□□ 0.45
CCDC180-201ENST00000460482 PRKCSHP14314 528 aaPredicted RBP17.86■□□□□ 0.45
CCDC180-201ENST00000460482 CFTRP13569 1480 aa17.85■□□□□ 0.45
CCDC180-201ENST00000460482 ARAP1Q96P48 1450 aa17.84■□□□□ 0.45
CCDC180-201ENST00000460482 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
CCDC180-201ENST00000460482 FANCIQ9NVI1 1328 aa17.79■□□□□ 0.44
CCDC180-201ENST00000460482 ERICH6Q7L0X2 663 aa17.77■□□□□ 0.43
CCDC180-201ENST00000460482 PRDM2Q13029 1718 aa17.76■□□□□ 0.43
CCDC180-201ENST00000460482 DDX10Q13206 875 aaKnown RBP17.76■□□□□ 0.43
CCDC180-201ENST00000460482 TRIM52Q96A61 297 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms