RNA–Protein interactions for RNA: ENST00000460214.5

LRP8-206, Transcript of LDL receptor related protein 8, humanhuman

TSL 3

Gene LRP8, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-206ENST00000460214 AEBP2Q6ZN18 517 aaPredicted RBP22.94■■□□□ 1.26
LRP8-206ENST00000460214 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
LRP8-206ENST00000460214 PHF23Q9BUL5 403 aaPredicted RBP19.83■□□□□ 0.77
LRP8-206ENST00000460214 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
LRP8-206ENST00000460214 NISCHQ9Y2I1 1504 aa19.42■□□□□ 0.7
LRP8-206ENST00000460214 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
LRP8-206ENST00000460214 FOXD1Q16676 465 aa18.02■□□□□ 0.48
LRP8-206ENST00000460214 PPP6R1Q9UPN7 881 aa17.44■□□□□ 0.38
LRP8-206ENST00000460214 CCDC180Q9P1Z9 1646 aa17.4■□□□□ 0.38
LRP8-206ENST00000460214 ADRA2BP18089 450 aa17.4■□□□□ 0.38
LRP8-206ENST00000460214 PIAS4Q8N2W9 510 aaPredicted RBP16.99■□□□□ 0.31
LRP8-206ENST00000460214 ABCC9O60706 1549 aa16.88■□□□□ 0.29
LRP8-206ENST00000460214 MSH5O43196 834 aa16.58■□□□□ 0.24
LRP8-206ENST00000460214 RB1CC1Q8TDY2 1594 aa16.33■□□□□ 0.2
LRP8-206ENST00000460214 NACADO15069 1562 aa16.32■□□□□ 0.2
LRP8-206ENST00000460214 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
LRP8-206ENST00000460214 ZCCHC6Q5VYS8 1495 aaKnown RBP16.2■□□□□ 0.18
LRP8-206ENST00000460214 DCAF1Q9Y4B6 1507 aa16.16■□□□□ 0.18
LRP8-206ENST00000460214 PPP4R3CPQ6ZMV5 832 aa16.15■□□□□ 0.18
LRP8-206ENST00000460214 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.15
LRP8-206ENST00000460214 DCAF8L2P0C7V8 631 aa15.98■□□□□ 0.15
LRP8-206ENST00000460214 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
LRP8-206ENST00000460214 KCNA4P22459 653 aa15.91■□□□□ 0.14
LRP8-206ENST00000460214 BICRAQ9NZM4 1560 aa15.86■□□□□ 0.13
LRP8-206ENST00000460214 SHROOM4Q9ULL8 1493 aa15.78■□□□□ 0.12
LRP8-206ENST00000460214 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
LRP8-206ENST00000460214 MAPK8IP2Q13387 824 aaPredicted RBP15.74■□□□□ 0.11
LRP8-206ENST00000460214 SCRIBQ14160 1630 aa15.73■□□□□ 0.11
LRP8-206ENST00000460214 CNKSR2Q8WXI2 1034 aa15.7■□□□□ 0.1
LRP8-206ENST00000460214 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
LRP8-206ENST00000460214 NPM3O75607 178 aaKnown RBP15.55■□□□□ 0.08
LRP8-206ENST00000460214 DMRT2Q9Y5R5 561 aa15.55■□□□□ 0.08
LRP8-206ENST00000460214 DNAJC5BQ9UF47 199 aa15.51■□□□□ 0.07
LRP8-206ENST00000460214 EIF4G1Q04637 1599 aaKnown RBP15.42■□□□□ 0.06
LRP8-206ENST00000460214 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
LRP8-206ENST00000460214 CC2D2AQ9P2K1 1620 aa15.35■□□□□ 0.05
LRP8-206ENST00000460214 HOXD11P31277 338 aaPredicted RBP15.31■□□□□ 0.04
LRP8-206ENST00000460214 CECR2Q9BXF3 1484 aa15.21■□□□□ 0.03
LRP8-206ENST00000460214 SLC4A1APQ9BWU0 796 aaKnown RBP15.16■□□□□ 0.02
LRP8-206ENST00000460214 SMARCA4P51532 1647 aa15.11■□□□□ 0.01
LRP8-206ENST00000460214 BAZ1AQ9NRL2 1556 aaPredicted RBP15.08■□□□□ 0
LRP8-206ENST00000460214 NCAPD3P42695 1498 aa15.03■□□□□ -0
LRP8-206ENST00000460214 SMARCA2P51531 1590 aa15.02■□□□□ -0
LRP8-206ENST00000460214 PEG3Q9GZU2 1588 aa15.02■□□□□ -0
LRP8-206ENST00000460214 HMGXB3Q12766 1538 aa15.01□□□□□ -0.01
LRP8-206ENST00000460214 ATAD2BQ9ULI0 1458 aa15□□□□□ -0.01
LRP8-206ENST00000460214 MROH2BQ7Z745 1585 aa14.94□□□□□ -0.02
LRP8-206ENST00000460214 POTEDQ86YR6 584 aa14.87□□□□□ -0.03
LRP8-206ENST00000460214 BAZ1BQ9UIG0 1483 aaKnown RBP14.86□□□□□ -0.03
LRP8-206ENST00000460214 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
LRP8-206ENST00000460214 WIZO95785 1651 aa14.78□□□□□ -0.04
LRP8-206ENST00000460214 DCAF8L1A6NGE4 600 aa14.74□□□□□ -0.05
LRP8-206ENST00000460214 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
LRP8-206ENST00000460214 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
LRP8-206ENST00000460214 ZBTB22O15209 634 aa14.67□□□□□ -0.06
LRP8-206ENST00000460214 SLC4A2P04920 1241 aa14.67□□□□□ -0.06
LRP8-206ENST00000460214 CSRNP3Q8WYN3 585 aa14.67□□□□□ -0.06
LRP8-206ENST00000460214 TOP2AP11388 1531 aaKnown RBP14.66□□□□□ -0.06
LRP8-206ENST00000460214 FOXD4L1Q9NU39 408 aa14.61□□□□□ -0.07
LRP8-206ENST00000460214 NESP48681 1621 aa14.61□□□□□ -0.07
LRP8-206ENST00000460214 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
LRP8-206ENST00000460214 CADPSQ9ULU8 1353 aa14.54□□□□□ -0.08
LRP8-206ENST00000460214 CUX2O14529 1486 aa14.54□□□□□ -0.08
LRP8-206ENST00000460214 KIF21AQ7Z4S6 1674 aa14.52□□□□□ -0.08
LRP8-206ENST00000460214 THOC2Q8NI27 1593 aaKnown RBP14.52□□□□□ -0.08
LRP8-206ENST00000460214 PDS5BQ9NTI5 1447 aa14.5□□□□□ -0.09
LRP8-206ENST00000460214 CFTRP13569 1480 aa14.49□□□□□ -0.09
LRP8-206ENST00000460214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.48□□□□□ -0.09
LRP8-206ENST00000460214 PRDM2Q13029 1718 aa14.48□□□□□ -0.09
LRP8-206ENST00000460214 CCDC88BA6NC98 1476 aa14.42□□□□□ -0.1
LRP8-206ENST00000460214 WDR62O43379 1518 aa14.39□□□□□ -0.11
LRP8-206ENST00000460214 CEP164Q9UPV0 1460 aa14.38□□□□□ -0.11
LRP8-206ENST00000460214 FANCD2Q9BXW9 1451 aa14.38□□□□□ -0.11
LRP8-206ENST00000460214 MRC2Q9UBG0 1479 aa14.38□□□□□ -0.11
LRP8-206ENST00000460214 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
LRP8-206ENST00000460214 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
LRP8-206ENST00000460214 URB2Q14146 1524 aaKnown RBP14.25□□□□□ -0.13
LRP8-206ENST00000460214 RNF39Q9H2S5 420 aa14.24□□□□□ -0.13
LRP8-206ENST00000460214 ABCC8Q09428 1581 aa14.18□□□□□ -0.14
LRP8-206ENST00000460214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.18□□□□□ -0.14
LRP8-206ENST00000460214 HNRNPUL2Q1KMD3 747 aaKnown RBP14.18□□□□□ -0.14
LRP8-206ENST00000460214 DNMBPQ6XZF7 1577 aa14.17□□□□□ -0.14
LRP8-206ENST00000460214 TOPBP1Q92547 1522 aa14.16□□□□□ -0.14
LRP8-206ENST00000460214 ATXN8OSP0DMR3 200 aa14.16□□□□□ -0.14
LRP8-206ENST00000460214 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
LRP8-206ENST00000460214 SUPT5HO00267 1087 aaKnown RBP14.12□□□□□ -0.15
LRP8-206ENST00000460214 IFT140Q96RY7 1462 aa14.09□□□□□ -0.15
LRP8-206ENST00000460214 C1QBPQ07021 282 aaKnown RBP14.07□□□□□ -0.16
LRP8-206ENST00000460214 TARBP1Q13395 1621 aaKnown RBP14.06□□□□□ -0.16
LRP8-206ENST00000460214 DNAJC5Q9H3Z4 198 aa14.06□□□□□ -0.16
LRP8-206ENST00000460214 POLA1P09884 1462 aaPredicted RBP14.04□□□□□ -0.16
LRP8-206ENST00000460214 CUX1P39880 1505 aa14.03□□□□□ -0.16
LRP8-206ENST00000460214 WDR97A6NE52 1622 aa14.01□□□□□ -0.17
LRP8-206ENST00000460214 EIF4G3O43432 1585 aaKnown RBP14□□□□□ -0.17
LRP8-206ENST00000460214 APLP2Q06481 763 aa14□□□□□ -0.17
LRP8-206ENST00000460214 ZNF608Q9ULD9 1512 aaPredicted RBP13.99□□□□□ -0.17
LRP8-206ENST00000460214 FGD5Q6ZNL6 1462 aa13.98□□□□□ -0.17
LRP8-206ENST00000460214 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
LRP8-206ENST00000460214 BIVM-ERCC5R4GMW8 1640 aa13.96□□□□□ -0.17
LRP8-206ENST00000460214 TOP2BQ02880 1626 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms