RNA–Protein interactions for RNA: ENST00000459894.6

SFXN2-202, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 2,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-202ENST00000459894 NISCHQ9Y2I1 1504 aa29.05■■■□□ 2.24
SFXN2-202ENST00000459894 SHROOM4Q9ULL8 1493 aa24.81■■□□□ 1.56
SFXN2-202ENST00000459894 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
SFXN2-202ENST00000459894 CCDC180Q9P1Z9 1646 aa24.62■■□□□ 1.53
SFXN2-202ENST00000459894 SUPT5HO00267 1087 aaKnown RBP24.48■■□□□ 1.51
SFXN2-202ENST00000459894 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
SFXN2-202ENST00000459894 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
SFXN2-202ENST00000459894 DCAF1Q9Y4B6 1507 aa23.93■■□□□ 1.42
SFXN2-202ENST00000459894 DCAF8L2P0C7V8 631 aa23.82■■□□□ 1.4
SFXN2-202ENST00000459894 HRCP23327 699 aa23.81■■□□□ 1.4
SFXN2-202ENST00000459894 PCGF6Q9BYE7 350 aa23.51■■□□□ 1.35
SFXN2-202ENST00000459894 ABCC9O60706 1549 aa23.32■■□□□ 1.32
SFXN2-202ENST00000459894 LOC105371045A0A1W2PR82 267 aa23.24■■□□□ 1.31
SFXN2-202ENST00000459894 PPARGC1BQ86YN6 1023 aaKnown RBP23.12■■□□□ 1.29
SFXN2-202ENST00000459894 TRIM26Q12899 539 aaPredicted RBP23.1■■□□□ 1.29
SFXN2-202ENST00000459894 RSF1Q96T23 1441 aaPredicted RBP23.08■■□□□ 1.29
SFXN2-202ENST00000459894 SCRIBQ14160 1630 aa23.01■■□□□ 1.27
SFXN2-202ENST00000459894 RB1CC1Q8TDY2 1594 aa22.92■■□□□ 1.26
SFXN2-202ENST00000459894 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
SFXN2-202ENST00000459894 ZEB1P37275 1124 aaPredicted RBP22.8■■□□□ 1.24
SFXN2-202ENST00000459894 NACADO15069 1562 aa22.69■■□□□ 1.22
SFXN2-202ENST00000459894 FAM9AQ8IZU1 332 aaPredicted RBP22.57■■□□□ 1.2
SFXN2-202ENST00000459894 CECR2Q9BXF3 1484 aa22.57■■□□□ 1.2
SFXN2-202ENST00000459894 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
SFXN2-202ENST00000459894 WIZO95785 1651 aa22.44■■□□□ 1.18
SFXN2-202ENST00000459894 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
SFXN2-202ENST00000459894 EIF4G1Q04637 1599 aaKnown RBP22.34■■□□□ 1.17
SFXN2-202ENST00000459894 EHMT2Q96KQ7 1210 aa22.29■■□□□ 1.16
SFXN2-202ENST00000459894 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
SFXN2-202ENST00000459894 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
SFXN2-202ENST00000459894 WRNQ14191 1432 aaPredicted RBP eCLIP22.09■■□□□ 1.13
SFXN2-202ENST00000459894 UNC13AQ9UPW8 1703 aa22.07■■□□□ 1.12
SFXN2-202ENST00000459894 SMARCA4P51532 1647 aa22.06■■□□□ 1.12
SFXN2-202ENST00000459894 SCAF1Q9H7N4 1312 aaKnown RBP22.05■■□□□ 1.12
SFXN2-202ENST00000459894 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
SFXN2-202ENST00000459894 CCER1Q8TC90 406 aaPredicted RBP22.03■■□□□ 1.12
SFXN2-202ENST00000459894 SMARCA2P51531 1590 aa22.02■■□□□ 1.12
SFXN2-202ENST00000459894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.02■■□□□ 1.12
SFXN2-202ENST00000459894 ABCC8Q09428 1581 aa22.01■■□□□ 1.11
SFXN2-202ENST00000459894 EEA1Q15075 1411 aa21.96■■□□□ 1.11
SFXN2-202ENST00000459894 CEP162Q5TB80 1403 aa21.96■■□□□ 1.11
SFXN2-202ENST00000459894 TNIKQ9UKE5 1360 aa21.95■■□□□ 1.1
SFXN2-202ENST00000459894 BICRAQ9NZM4 1560 aa21.9■■□□□ 1.1
SFXN2-202ENST00000459894 SOGA1O94964 1423 aa21.88■■□□□ 1.09
SFXN2-202ENST00000459894 PABPN1Q86U42 306 aaKnown RBP eCLIP21.84■■□□□ 1.09
SFXN2-202ENST00000459894 CSRNP3Q8WYN3 585 aa21.81■■□□□ 1.08
SFXN2-202ENST00000459894 ACIN1Q9UKV3 1341 aaKnown RBP21.81■■□□□ 1.08
SFXN2-202ENST00000459894 DIEXFQ68CQ4 756 aaKnown RBP21.78■■□□□ 1.08
SFXN2-202ENST00000459894 GOLGA3Q08378 1498 aa21.77■■□□□ 1.08
SFXN2-202ENST00000459894 RUSC2Q8N2Y8 1516 aa21.73■■□□□ 1.07
SFXN2-202ENST00000459894 UBTFP17480 764 aaKnown RBP21.71■■□□□ 1.07
SFXN2-202ENST00000459894 NEUROD1Q13562 356 aa21.69■■□□□ 1.06
SFXN2-202ENST00000459894 CENPBP07199 599 aaPredicted RBP21.68■■□□□ 1.06
SFXN2-202ENST00000459894 PEG3Q9GZU2 1588 aa21.68■■□□□ 1.06
SFXN2-202ENST00000459894 TTBK1Q5TCY1 1321 aaPredicted RBP21.68■■□□□ 1.06
SFXN2-202ENST00000459894 CEP164Q9UPV0 1460 aa21.62■■□□□ 1.05
SFXN2-202ENST00000459894 KIF21BO75037 1637 aa21.61■■□□□ 1.05
SFXN2-202ENST00000459894 ZNF316A6NFI3 1004 aaPredicted RBP21.57■■□□□ 1.04
SFXN2-202ENST00000459894 SYNJ1O43426 1573 aa21.54■■□□□ 1.04
SFXN2-202ENST00000459894 GTF3C3Q9Y5Q9 886 aa21.51■■□□□ 1.03
SFXN2-202ENST00000459894 BAZ1BQ9UIG0 1483 aaKnown RBP21.5■■□□□ 1.03
SFXN2-202ENST00000459894 CLIP1P30622 1438 aa21.49■■□□□ 1.03
SFXN2-202ENST00000459894 VPS8Q8N3P4 1428 aa21.47■■□□□ 1.03
SFXN2-202ENST00000459894 ATAD2BQ9ULI0 1458 aa21.42■■□□□ 1.02
SFXN2-202ENST00000459894 HNRNPUL2Q1KMD3 747 aaKnown RBP21.36■■□□□ 1.01
SFXN2-202ENST00000459894 RAPGEF2Q9Y4G8 1499 aa21.35■■□□□ 1.01
SFXN2-202ENST00000459894 APLP2Q06481 763 aa21.34■■□□□ 1.01
SFXN2-202ENST00000459894 TOP2BQ02880 1626 aa21.3■■□□□ 1
SFXN2-202ENST00000459894 MIER1Q8N108 512 aa21.23■□□□□ 0.99
SFXN2-202ENST00000459894 BIVM-ERCC5R4GMW8 1640 aa21.23■□□□□ 0.99
SFXN2-202ENST00000459894 ERICH3Q5RHP9 1530 aa21.23■□□□□ 0.99
SFXN2-202ENST00000459894 CLSPNQ9HAW4 1339 aa21.22■□□□□ 0.99
SFXN2-202ENST00000459894 YTHDC1Q96MU7 727 aaKnown RBP21.18■□□□□ 0.98
SFXN2-202ENST00000459894 PRXQ9BXM0 1461 aa21.17■□□□□ 0.98
SFXN2-202ENST00000459894 ARAP1Q96P48 1450 aa21.12■□□□□ 0.97
SFXN2-202ENST00000459894 MYT1Q01538 1121 aa21.11■□□□□ 0.97
SFXN2-202ENST00000459894 DHX57Q6P158 1386 aaKnown RBP21.09■□□□□ 0.97
SFXN2-202ENST00000459894 RANGAP1P46060 587 aaPredicted RBP21.08■□□□□ 0.97
SFXN2-202ENST00000459894 RRBP1Q9P2E9 1410 aaKnown RBP21.03■□□□□ 0.96
SFXN2-202ENST00000459894 HMGXB3Q12766 1538 aa21.02■□□□□ 0.96
SFXN2-202ENST00000459894 KIF27Q86VH2 1401 aa21■□□□□ 0.95
SFXN2-202ENST00000459894 CUX1P39880 1505 aa20.99■□□□□ 0.95
SFXN2-202ENST00000459894 CUX2O14529 1486 aa20.99■□□□□ 0.95
SFXN2-202ENST00000459894 CC2D2AQ9P2K1 1620 aa20.98■□□□□ 0.95
SFXN2-202ENST00000459894 NCAPD3P42695 1498 aa20.98■□□□□ 0.95
SFXN2-202ENST00000459894 KANK4Q5T7N3 995 aaPredicted RBP20.98■□□□□ 0.95
SFXN2-202ENST00000459894 CFTRP13569 1480 aa20.89■□□□□ 0.93
SFXN2-202ENST00000459894 CCNB3Q8WWL7 1395 aa20.89■□□□□ 0.93
SFXN2-202ENST00000459894 ARHGAP35Q9NRY4 1499 aa20.89■□□□□ 0.93
SFXN2-202ENST00000459894 MAP3K1Q13233 1512 aa20.81■□□□□ 0.92
SFXN2-202ENST00000459894 PRDM2Q13029 1718 aa20.75■□□□□ 0.91
SFXN2-202ENST00000459894 TIAM1Q13009 1591 aa20.74■□□□□ 0.91
SFXN2-202ENST00000459894 DNAJC5BQ9UF47 199 aa20.72■□□□□ 0.91
SFXN2-202ENST00000459894 IGF1RP08069 1367 aa20.72■□□□□ 0.91
SFXN2-202ENST00000459894 RAB3GAP2Q9H2M9 1393 aa20.71■□□□□ 0.91
SFXN2-202ENST00000459894 MAPKBP1O60336 1514 aa20.7■□□□□ 0.9
SFXN2-202ENST00000459894 SUPT16HQ9Y5B9 1047 aaKnown RBP20.7■□□□□ 0.9
SFXN2-202ENST00000459894 LRRC9Q6ZRR7 1453 aa20.65■□□□□ 0.9
SFXN2-202ENST00000459894 ITGAEP38570 1179 aa20.65■□□□□ 0.9
SFXN2-202ENST00000459894 SETD5Q9C0A6 1442 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms