RNA–Protein interactions for RNA: ENST00000459841.1

TRIP12-211, Transcript of thyroid hormone receptor interactor 12, humanhuman

TSL 3

Gene TRIP12, Length 1,009 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP12-211ENST00000459841 AEBP2Q6ZN18 517 aaPredicted RBP24.94■■□□□ 1.58
TRIP12-211ENST00000459841 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
TRIP12-211ENST00000459841 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
TRIP12-211ENST00000459841 PHF23Q9BUL5 403 aaPredicted RBP20.94■□□□□ 0.94
TRIP12-211ENST00000459841 FOXD1Q16676 465 aa19.83■□□□□ 0.77
TRIP12-211ENST00000459841 NISCHQ9Y2I1 1504 aa18.86■□□□□ 0.61
TRIP12-211ENST00000459841 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
TRIP12-211ENST00000459841 MSH5O43196 834 aa18.58■□□□□ 0.56
TRIP12-211ENST00000459841 PPP6R1Q9UPN7 881 aa18.45■□□□□ 0.54
TRIP12-211ENST00000459841 PIAS4Q8N2W9 510 aaPredicted RBP18.44■□□□□ 0.54
TRIP12-211ENST00000459841 POTEDQ86YR6 584 aa18.4■□□□□ 0.54
TRIP12-211ENST00000459841 ADRA2BP18089 450 aa18.35■□□□□ 0.53
TRIP12-211ENST00000459841 ABCC9O60706 1549 aa17.02■□□□□ 0.32
TRIP12-211ENST00000459841 CCDC180Q9P1Z9 1646 aa16.97■□□□□ 0.31
TRIP12-211ENST00000459841 MAPK8IP2Q13387 824 aaPredicted RBP16.9■□□□□ 0.3
TRIP12-211ENST00000459841 DMRT2Q9Y5R5 561 aa16.84■□□□□ 0.29
TRIP12-211ENST00000459841 SCAF1Q9H7N4 1312 aaKnown RBP16.72■□□□□ 0.27
TRIP12-211ENST00000459841 PPP4R3CPQ6ZMV5 832 aa16.36■□□□□ 0.21
TRIP12-211ENST00000459841 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.18
TRIP12-211ENST00000459841 HOXD11P31277 338 aaPredicted RBP16.19■□□□□ 0.18
TRIP12-211ENST00000459841 DNAJC5BQ9UF47 199 aa16.15■□□□□ 0.18
TRIP12-211ENST00000459841 NACADO15069 1562 aa16.1■□□□□ 0.17
TRIP12-211ENST00000459841 CNKSR2Q8WXI2 1034 aa16.09■□□□□ 0.17
TRIP12-211ENST00000459841 DCAF8L1A6NGE4 600 aa16.03■□□□□ 0.16
TRIP12-211ENST00000459841 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
TRIP12-211ENST00000459841 CACNB1Q02641 598 aaPredicted RBP15.99■□□□□ 0.15
TRIP12-211ENST00000459841 MYO15BQ96JP2 1530 aa15.92■□□□□ 0.14
TRIP12-211ENST00000459841 RNF39Q9H2S5 420 aa15.88■□□□□ 0.13
TRIP12-211ENST00000459841 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
TRIP12-211ENST00000459841 PABPN1Q86U42 306 aaKnown RBP eCLIP15.83■□□□□ 0.12
TRIP12-211ENST00000459841 UNC13AQ9UPW8 1703 aa15.78■□□□□ 0.12
TRIP12-211ENST00000459841 BICRAQ9NZM4 1560 aa15.75■□□□□ 0.11
TRIP12-211ENST00000459841 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
TRIP12-211ENST00000459841 DCAF1Q9Y4B6 1507 aa15.64■□□□□ 0.09
TRIP12-211ENST00000459841 C1QBPQ07021 282 aaKnown RBP15.61■□□□□ 0.09
TRIP12-211ENST00000459841 SHROOM4Q9ULL8 1493 aa15.6■□□□□ 0.09
TRIP12-211ENST00000459841 ZCCHC6Q5VYS8 1495 aaKnown RBP15.59■□□□□ 0.09
TRIP12-211ENST00000459841 NPM3O75607 178 aaKnown RBP15.48■□□□□ 0.07
TRIP12-211ENST00000459841 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
TRIP12-211ENST00000459841 CECR2Q9BXF3 1484 aa15.39■□□□□ 0.05
TRIP12-211ENST00000459841 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
TRIP12-211ENST00000459841 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
TRIP12-211ENST00000459841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.32■□□□□ 0.04
TRIP12-211ENST00000459841 U3KPZ7 1027 aaPredicted RBP15.07■□□□□ 0
TRIP12-211ENST00000459841 KCNA4P22459 653 aa15.05■□□□□ -0
TRIP12-211ENST00000459841 DNAJC5Q9H3Z4 198 aa14.98□□□□□ -0.01
TRIP12-211ENST00000459841 NCAPD3P42695 1498 aa14.9□□□□□ -0.02
TRIP12-211ENST00000459841 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
TRIP12-211ENST00000459841 SLC4A2P04920 1241 aa14.86□□□□□ -0.03
TRIP12-211ENST00000459841 DSG3P32926 999 aa14.81□□□□□ -0.04
TRIP12-211ENST00000459841 CUX2O14529 1486 aa14.81□□□□□ -0.04
TRIP12-211ENST00000459841 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
TRIP12-211ENST00000459841 CAPN15O75808 1086 aa14.78□□□□□ -0.04
TRIP12-211ENST00000459841 SMARCA2P51531 1590 aa14.73□□□□□ -0.05
TRIP12-211ENST00000459841 HMGXB3Q12766 1538 aa14.73□□□□□ -0.05
TRIP12-211ENST00000459841 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
TRIP12-211ENST00000459841 ERCC6Q03468 1493 aa14.7□□□□□ -0.06
TRIP12-211ENST00000459841 BAZ1AQ9NRL2 1556 aaPredicted RBP14.64□□□□□ -0.07
TRIP12-211ENST00000459841 PEG3Q9GZU2 1588 aa14.64□□□□□ -0.07
TRIP12-211ENST00000459841 BAZ1BQ9UIG0 1483 aaKnown RBP14.6□□□□□ -0.07
TRIP12-211ENST00000459841 NESP48681 1621 aa14.59□□□□□ -0.07
TRIP12-211ENST00000459841 APLP2Q06481 763 aa14.54□□□□□ -0.08
TRIP12-211ENST00000459841 LAMC3Q9Y6N6 1575 aa14.53□□□□□ -0.08
TRIP12-211ENST00000459841 ZNF219Q9P2Y4 722 aaPredicted RBP14.52□□□□□ -0.09
TRIP12-211ENST00000459841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
TRIP12-211ENST00000459841 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
TRIP12-211ENST00000459841 HNRNPUL2Q1KMD3 747 aaKnown RBP14.51□□□□□ -0.09
TRIP12-211ENST00000459841 MROH2BQ7Z745 1585 aa14.49□□□□□ -0.09
TRIP12-211ENST00000459841 THOC2Q8NI27 1593 aaKnown RBP14.49□□□□□ -0.09
TRIP12-211ENST00000459841 PDS5BQ9NTI5 1447 aa14.47□□□□□ -0.09
TRIP12-211ENST00000459841 ABCB7O75027 752 aa14.45□□□□□ -0.1
TRIP12-211ENST00000459841 SAMD1Q6SPF0 538 aaPredicted RBP14.44□□□□□ -0.1
TRIP12-211ENST00000459841 CADPSQ9ULU8 1353 aa14.42□□□□□ -0.1
TRIP12-211ENST00000459841 POTEHQ6S545 545 aa14.38□□□□□ -0.11
TRIP12-211ENST00000459841 KIF21AQ7Z4S6 1674 aa14.38□□□□□ -0.11
TRIP12-211ENST00000459841 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
TRIP12-211ENST00000459841 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
TRIP12-211ENST00000459841 WDR62O43379 1518 aa14.3□□□□□ -0.12
TRIP12-211ENST00000459841 WIZO95785 1651 aa14.28□□□□□ -0.12
TRIP12-211ENST00000459841 CFTRP13569 1480 aa14.23□□□□□ -0.13
TRIP12-211ENST00000459841 CEP164Q9UPV0 1460 aa14.22□□□□□ -0.13
TRIP12-211ENST00000459841 FANCD2Q9BXW9 1451 aa14.2□□□□□ -0.14
TRIP12-211ENST00000459841 RSF1Q96T23 1441 aaPredicted RBP14.18□□□□□ -0.14
TRIP12-211ENST00000459841 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
TRIP12-211ENST00000459841 TOP2AP11388 1531 aaKnown RBP14.13□□□□□ -0.15
TRIP12-211ENST00000459841 POLA2Q14181 598 aa14.12□□□□□ -0.15
TRIP12-211ENST00000459841 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
TRIP12-211ENST00000459841 TRIM41Q8WV44 630 aa14.12□□□□□ -0.15
TRIP12-211ENST00000459841 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
TRIP12-211ENST00000459841 RBM42Q9BTD8 480 aaKnown RBP14.09□□□□□ -0.15
TRIP12-211ENST00000459841 FOXD4L1Q9NU39 408 aa14.08□□□□□ -0.16
TRIP12-211ENST00000459841 ATF5Q9Y2D1 282 aaPredicted RBP14.02□□□□□ -0.17
TRIP12-211ENST00000459841 PRDM2Q13029 1718 aa13.99□□□□□ -0.17
TRIP12-211ENST00000459841 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
TRIP12-211ENST00000459841 IFT140Q96RY7 1462 aa13.97□□□□□ -0.17
TRIP12-211ENST00000459841 ABCC8Q09428 1581 aa13.95□□□□□ -0.18
TRIP12-211ENST00000459841 TOPBP1Q92547 1522 aa13.92□□□□□ -0.18
TRIP12-211ENST00000459841 ZNF608Q9ULD9 1512 aaPredicted RBP13.92□□□□□ -0.18
TRIP12-211ENST00000459841 ZBTB22O15209 634 aa13.89□□□□□ -0.19
TRIP12-211ENST00000459841 RIMBP3CA6NJZ7 1639 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms