RNA–Protein interactions for RNA: ENST00000458129.1

EPHA1-202, Transcript of EPH receptor A1, humanhuman

TSL 3

Gene EPHA1, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-202ENST00000458129 AEBP2Q6ZN18 517 aaPredicted RBP36.69■■■■□ 3.46
EPHA1-202ENST00000458129 CHIC1Q5VXU3 224 aa35.69■■■■□ 3.3
EPHA1-202ENST00000458129 PHF23Q9BUL5 403 aaPredicted RBP31.42■■■□□ 2.62
EPHA1-202ENST00000458129 SENP3Q9H4L4 574 aaPredicted RBP31.08■■■□□ 2.57
EPHA1-202ENST00000458129 PLPPR3Q6T4P5 718 aa28.91■■■□□ 2.22
EPHA1-202ENST00000458129 FOXD1Q16676 465 aa28.9■■■□□ 2.22
EPHA1-202ENST00000458129 PPP6R1Q9UPN7 881 aa27.77■■■□□ 2.04
EPHA1-202ENST00000458129 ADRA2BP18089 450 aa27.72■■■□□ 2.03
EPHA1-202ENST00000458129 NISCHQ9Y2I1 1504 aa27.3■■□□□ 1.96
EPHA1-202ENST00000458129 PIAS4Q8N2W9 510 aaPredicted RBP27.2■■□□□ 1.94
EPHA1-202ENST00000458129 MSH5O43196 834 aa26.63■■□□□ 1.85
EPHA1-202ENST00000458129 ABCC9O60706 1549 aa25.98■■□□□ 1.75
EPHA1-202ENST00000458129 PPP4R3CPQ6ZMV5 832 aa25.49■■□□□ 1.67
EPHA1-202ENST00000458129 DNAJC5BQ9UF47 199 aa25.37■■□□□ 1.65
EPHA1-202ENST00000458129 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
EPHA1-202ENST00000458129 MAPK8IP2Q13387 824 aaPredicted RBP25.2■■□□□ 1.62
EPHA1-202ENST00000458129 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
EPHA1-202ENST00000458129 KCNA4P22459 653 aa24.82■■□□□ 1.56
EPHA1-202ENST00000458129 DMRT2Q9Y5R5 561 aa24.81■■□□□ 1.56
EPHA1-202ENST00000458129 CNKSR2Q8WXI2 1034 aa24.77■■□□□ 1.56
EPHA1-202ENST00000458129 NCBP3Q53F19 620 aaKnown RBP24.75■■□□□ 1.55
EPHA1-202ENST00000458129 POTEDQ86YR6 584 aa24.47■■□□□ 1.51
EPHA1-202ENST00000458129 NPM3O75607 178 aaKnown RBP24.44■■□□□ 1.5
EPHA1-202ENST00000458129 RNF216Q9NWF9 866 aaPredicted RBP24.32■■□□□ 1.48
EPHA1-202ENST00000458129 HOXD11P31277 338 aaPredicted RBP24.26■■□□□ 1.47
EPHA1-202ENST00000458129 RB1CC1Q8TDY2 1594 aa24.23■■□□□ 1.47
EPHA1-202ENST00000458129 PABPN1Q86U42 306 aaKnown RBP eCLIP23.97■■□□□ 1.43
EPHA1-202ENST00000458129 DNAJC5Q9H3Z4 198 aa23.96■■□□□ 1.43
EPHA1-202ENST00000458129 UNC13AQ9UPW8 1703 aa23.86■■□□□ 1.41
EPHA1-202ENST00000458129 NACADO15069 1562 aa23.8■■□□□ 1.4
EPHA1-202ENST00000458129 DCAF8L1A6NGE4 600 aa23.73■■□□□ 1.39
EPHA1-202ENST00000458129 BICRAQ9NZM4 1560 aa23.71■■□□□ 1.39
EPHA1-202ENST00000458129 SLC4A1APQ9BWU0 796 aaKnown RBP23.58■■□□□ 1.37
EPHA1-202ENST00000458129 CECR2Q9BXF3 1484 aa23.49■■□□□ 1.35
EPHA1-202ENST00000458129 CC2D2AQ9P2K1 1620 aa23.45■■□□□ 1.34
EPHA1-202ENST00000458129 DCAF8L2P0C7V8 631 aa23.3■■□□□ 1.32
EPHA1-202ENST00000458129 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.3
EPHA1-202ENST00000458129 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.29
EPHA1-202ENST00000458129 SHROOM4Q9ULL8 1493 aa23.13■■□□□ 1.29
EPHA1-202ENST00000458129 SLC4A2P04920 1241 aa23.13■■□□□ 1.29
EPHA1-202ENST00000458129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.1■■□□□ 1.29
EPHA1-202ENST00000458129 ZBTB22O15209 634 aa22.86■■□□□ 1.25
EPHA1-202ENST00000458129 RNF39Q9H2S5 420 aa22.85■■□□□ 1.25
EPHA1-202ENST00000458129 FOXD4L1Q9NU39 408 aa22.82■■□□□ 1.24
EPHA1-202ENST00000458129 EHMT2Q96KQ7 1210 aa22.81■■□□□ 1.24
EPHA1-202ENST00000458129 CUX2O14529 1486 aa22.79■■□□□ 1.24
EPHA1-202ENST00000458129 U3KPZ7 1027 aaPredicted RBP22.75■■□□□ 1.23
EPHA1-202ENST00000458129 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
EPHA1-202ENST00000458129 CSRNP3Q8WYN3 585 aa22.62■■□□□ 1.21
EPHA1-202ENST00000458129 MYCNP04198 464 aaPredicted RBP22.55■■□□□ 1.2
EPHA1-202ENST00000458129 C1QBPQ07021 282 aaKnown RBP22.55■■□□□ 1.2
EPHA1-202ENST00000458129 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
EPHA1-202ENST00000458129 ZCCHC6Q5VYS8 1495 aaKnown RBP22.43■■□□□ 1.18
EPHA1-202ENST00000458129 TRIM41Q8WV44 630 aa22.43■■□□□ 1.18
EPHA1-202ENST00000458129 ERCC6Q03468 1493 aa22.42■■□□□ 1.18
EPHA1-202ENST00000458129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.36■■□□□ 1.17
EPHA1-202ENST00000458129 HNRNPUL2Q1KMD3 747 aaKnown RBP22.36■■□□□ 1.17
EPHA1-202ENST00000458129 CACNB1Q02641 598 aaPredicted RBP22.31■■□□□ 1.16
EPHA1-202ENST00000458129 SAMD1Q6SPF0 538 aaPredicted RBP22.3■■□□□ 1.16
EPHA1-202ENST00000458129 SPINK5Q9NQ38 1064 aaPredicted RBP22.16■■□□□ 1.14
EPHA1-202ENST00000458129 APLP2Q06481 763 aa22.12■■□□□ 1.13
EPHA1-202ENST00000458129 THOC2Q8NI27 1593 aaKnown RBP22.11■■□□□ 1.13
EPHA1-202ENST00000458129 NESP48681 1621 aa22.07■■□□□ 1.12
EPHA1-202ENST00000458129 CAPN15O75808 1086 aa22.03■■□□□ 1.12
EPHA1-202ENST00000458129 ATXN8OSP0DMR3 200 aa22.02■■□□□ 1.12
EPHA1-202ENST00000458129 ATF5Q9Y2D1 282 aaPredicted RBP22.02■■□□□ 1.12
EPHA1-202ENST00000458129 NCAPD3P42695 1498 aa22■■□□□ 1.11
EPHA1-202ENST00000458129 TRHP20396 242 aaPredicted RBP21.92■■□□□ 1.1
EPHA1-202ENST00000458129 ZNF219Q9P2Y4 722 aaPredicted RBP21.87■■□□□ 1.09
EPHA1-202ENST00000458129 SMARCA2P51531 1590 aa21.82■■□□□ 1.08
EPHA1-202ENST00000458129 ATAD2BQ9ULI0 1458 aa21.8■■□□□ 1.08
EPHA1-202ENST00000458129 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
EPHA1-202ENST00000458129 HMGXB3Q12766 1538 aa21.78■■□□□ 1.08
EPHA1-202ENST00000458129 DSG3P32926 999 aa21.71■■□□□ 1.07
EPHA1-202ENST00000458129 BAZ1AQ9NRL2 1556 aaPredicted RBP21.68■■□□□ 1.06
EPHA1-202ENST00000458129 LAMC3Q9Y6N6 1575 aa21.68■■□□□ 1.06
EPHA1-202ENST00000458129 ABCB7O75027 752 aa21.63■■□□□ 1.05
EPHA1-202ENST00000458129 SMARCA4P51532 1647 aa21.55■■□□□ 1.04
EPHA1-202ENST00000458129 POLA2Q14181 598 aa21.55■■□□□ 1.04
EPHA1-202ENST00000458129 WDR62O43379 1518 aa21.5■■□□□ 1.03
EPHA1-202ENST00000458129 PDS5BQ9NTI5 1447 aa21.5■■□□□ 1.03
EPHA1-202ENST00000458129 RIMBP3CA6NJZ7 1639 aa21.5■■□□□ 1.03
EPHA1-202ENST00000458129 RIMBP3BA6NNM3 1639 aa21.5■■□□□ 1.03
EPHA1-202ENST00000458129 RIMBP3Q9UFD9 1639 aa21.5■■□□□ 1.03
EPHA1-202ENST00000458129 BAZ1BQ9UIG0 1483 aaKnown RBP21.5■■□□□ 1.03
EPHA1-202ENST00000458129 MRC2Q9UBG0 1479 aa21.46■■□□□ 1.03
EPHA1-202ENST00000458129 OSCARQ8IYS5 282 aa21.46■■□□□ 1.03
EPHA1-202ENST00000458129 PEG3Q9GZU2 1588 aa21.36■■□□□ 1.01
EPHA1-202ENST00000458129 ARHGEF11O15085 1522 aa21.29■■□□□ 1
EPHA1-202ENST00000458129 CADPSQ9ULU8 1353 aa21.24■□□□□ 0.99
EPHA1-202ENST00000458129 CEP164Q9UPV0 1460 aa21.14■□□□□ 0.98
EPHA1-202ENST00000458129 ZBTB12Q9Y330 459 aaPredicted RBP21.13■□□□□ 0.97
EPHA1-202ENST00000458129 CYB5RLQ6IPT4 315 aa21.07■□□□□ 0.96
EPHA1-202ENST00000458129 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
EPHA1-202ENST00000458129 MKRN4PQ13434 485 aaPredicted RBP21.06■□□□□ 0.96
EPHA1-202ENST00000458129 FANCD2Q9BXW9 1451 aa21.04■□□□□ 0.96
EPHA1-202ENST00000458129 ARAP1Q96P48 1450 aa21.03■□□□□ 0.96
EPHA1-202ENST00000458129 FBLN2P98095 1184 aa21.02■□□□□ 0.96
EPHA1-202ENST00000458129 URB2Q14146 1524 aaKnown RBP21■□□□□ 0.95
EPHA1-202ENST00000458129 ZNF608Q9ULD9 1512 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms