RNA–Protein interactions for RNA: ENST00000452974.1

LCT-202, Transcript of lactase, humanhuman

TSL 1 (best)

Gene LCT, Length 3,508 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCT-202ENST00000452974 NISCHQ9Y2I1 1504 aa13.77□□□□□ -0.2
LCT-202ENST00000452974 DCAF8L2P0C7V8 631 aa12.3□□□□□ -0.44
LCT-202ENST00000452974 SHROOM4Q9ULL8 1493 aa12.03□□□□□ -0.48
LCT-202ENST00000452974 SUPT5HO00267 1087 aaKnown RBP11.75□□□□□ -0.53
LCT-202ENST00000452974 CCDC180Q9P1Z9 1646 aa11.6□□□□□ -0.55
LCT-202ENST00000452974 ABCC9O60706 1549 aa11.55□□□□□ -0.56
LCT-202ENST00000452974 ZCCHC6Q5VYS8 1495 aaKnown RBP11.52□□□□□ -0.57
LCT-202ENST00000452974 PELP1Q8IZL8 1130 aaKnown RBP11.36□□□□□ -0.59
LCT-202ENST00000452974 SCRIBQ14160 1630 aa11.16□□□□□ -0.62
LCT-202ENST00000452974 PABPN1Q86U42 306 aaKnown RBP eCLIP11.15□□□□□ -0.62
LCT-202ENST00000452974 MYT1Q01538 1121 aa11.15□□□□□ -0.62
LCT-202ENST00000452974 DCAF1Q9Y4B6 1507 aa11.11□□□□□ -0.63
LCT-202ENST00000452974 EHMT2Q96KQ7 1210 aa11.01□□□□□ -0.65
LCT-202ENST00000452974 CHIC1Q5VXU3 224 aa11□□□□□ -0.65
LCT-202ENST00000452974 NACADO15069 1562 aa10.99□□□□□ -0.65
LCT-202ENST00000452974 FAM9AQ8IZU1 332 aaPredicted RBP10.95□□□□□ -0.66
LCT-202ENST00000452974 RB1CC1Q8TDY2 1594 aa10.94□□□□□ -0.66
LCT-202ENST00000452974 TRIM41Q8WV44 630 aa10.89□□□□□ -0.67
LCT-202ENST00000452974 MYO15BQ96JP2 1530 aa10.88□□□□□ -0.67
LCT-202ENST00000452974 CECR2Q9BXF3 1484 aa10.88□□□□□ -0.67
LCT-202ENST00000452974 RSF1Q96T23 1441 aaPredicted RBP10.87□□□□□ -0.67
LCT-202ENST00000452974 LOC105371045A0A1W2PR82 267 aa10.8□□□□□ -0.68
LCT-202ENST00000452974 MROH2BQ7Z745 1585 aa10.74□□□□□ -0.69
LCT-202ENST00000452974 SLC24A1O60721 1099 aa10.68□□□□□ -0.7
LCT-202ENST00000452974 TTBK1Q5TCY1 1321 aaPredicted RBP10.67□□□□□ -0.7
LCT-202ENST00000452974 HRCP23327 699 aa10.66□□□□□ -0.7
LCT-202ENST00000452974 BAZ1AQ9NRL2 1556 aaPredicted RBP10.62□□□□□ -0.71
LCT-202ENST00000452974 WIZO95785 1651 aa10.61□□□□□ -0.71
LCT-202ENST00000452974 RANGAP1P46060 587 aaPredicted RBP10.57□□□□□ -0.72
LCT-202ENST00000452974 PCGF6Q9BYE7 350 aa10.57□□□□□ -0.72
LCT-202ENST00000452974 UBTFP17480 764 aaKnown RBP10.52□□□□□ -0.73
LCT-202ENST00000452974 PPARGC1BQ86YN6 1023 aaKnown RBP10.52□□□□□ -0.73
LCT-202ENST00000452974 UNC13AQ9UPW8 1703 aa10.5□□□□□ -0.73
LCT-202ENST00000452974 BICRAQ9NZM4 1560 aa10.49□□□□□ -0.73
LCT-202ENST00000452974 SMARCA4P51532 1647 aa10.49□□□□□ -0.73
LCT-202ENST00000452974 CCDC88BA6NC98 1476 aa10.48□□□□□ -0.73
LCT-202ENST00000452974 BAZ1BQ9UIG0 1483 aaKnown RBP10.47□□□□□ -0.73
LCT-202ENST00000452974 SCAF1Q9H7N4 1312 aaKnown RBP10.45□□□□□ -0.74
LCT-202ENST00000452974 ATAD2BQ9ULI0 1458 aa10.43□□□□□ -0.74
LCT-202ENST00000452974 PRKCSHP14314 528 aaPredicted RBP10.41□□□□□ -0.74
LCT-202ENST00000452974 TOP2AP11388 1531 aaKnown RBP10.41□□□□□ -0.74
LCT-202ENST00000452974 ABCC8Q09428 1581 aa10.38□□□□□ -0.75
LCT-202ENST00000452974 CSRNP3Q8WYN3 585 aa10.37□□□□□ -0.75
LCT-202ENST00000452974 SMARCA2P51531 1590 aa10.34□□□□□ -0.75
LCT-202ENST00000452974 WRNQ14191 1432 aaPredicted RBP eCLIP10.33□□□□□ -0.76
LCT-202ENST00000452974 EIF4G1Q04637 1599 aaKnown RBP10.31□□□□□ -0.76
LCT-202ENST00000452974 SOGA1O94964 1423 aa10.3□□□□□ -0.76
LCT-202ENST00000452974 APLP2Q06481 763 aa10.29□□□□□ -0.76
LCT-202ENST00000452974 TRIM26Q12899 539 aaPredicted RBP10.28□□□□□ -0.76
LCT-202ENST00000452974 BCL11AQ9H165 835 aa10.28□□□□□ -0.76
LCT-202ENST00000452974 DNAJC5BQ9UF47 199 aa10.25□□□□□ -0.77
LCT-202ENST00000452974 NCAPD3P42695 1498 aa10.24□□□□□ -0.77
LCT-202ENST00000452974 ATP1B4Q9UN42 357 aaPredicted RBP10.24□□□□□ -0.77
LCT-202ENST00000452974 DNAJC5Q9H3Z4 198 aa10.22□□□□□ -0.77
LCT-202ENST00000452974 RUSC2Q8N2Y8 1516 aa10.22□□□□□ -0.77
LCT-202ENST00000452974 ERICH6Q7L0X2 663 aa10.21□□□□□ -0.77
LCT-202ENST00000452974 CADPSQ9ULU8 1353 aa10.17□□□□□ -0.78
LCT-202ENST00000452974 PEG3Q9GZU2 1588 aa10.15□□□□□ -0.78
LCT-202ENST00000452974 CUX2O14529 1486 aa10.14□□□□□ -0.79
LCT-202ENST00000452974 CC2D2AQ9P2K1 1620 aa10.14□□□□□ -0.79
LCT-202ENST00000452974 P3H3Q8IVL6 736 aa10.13□□□□□ -0.79
LCT-202ENST00000452974 CEP162Q5TB80 1403 aa10.11□□□□□ -0.79
LCT-202ENST00000452974 EEA1Q15075 1411 aa10.11□□□□□ -0.79
LCT-202ENST00000452974 HNRNPUL2Q1KMD3 747 aaKnown RBP10.1□□□□□ -0.79
LCT-202ENST00000452974 AEBP2Q6ZN18 517 aaPredicted RBP10.1□□□□□ -0.79
LCT-202ENST00000452974 HMGXB3Q12766 1538 aa10.09□□□□□ -0.79
LCT-202ENST00000452974 CCER1Q8TC90 406 aaPredicted RBP10.09□□□□□ -0.79
LCT-202ENST00000452974 NESP48681 1621 aa10.08□□□□□ -0.8
LCT-202ENST00000452974 SYNJ1O43426 1573 aa10.08□□□□□ -0.8
LCT-202ENST00000452974 GOLGA3Q08378 1498 aa10.08□□□□□ -0.8
LCT-202ENST00000452974 TNIKQ9UKE5 1360 aa10.08□□□□□ -0.8
LCT-202ENST00000452974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.07□□□□□ -0.8
LCT-202ENST00000452974 CFTRP13569 1480 aa10.07□□□□□ -0.8
LCT-202ENST00000452974 KIF27Q86VH2 1401 aa10.07□□□□□ -0.8
LCT-202ENST00000452974 CENPBP07199 599 aaPredicted RBP10.06□□□□□ -0.8
LCT-202ENST00000452974 ITGAEP38570 1179 aa10.06□□□□□ -0.8
LCT-202ENST00000452974 CLIP1P30622 1438 aa10.06□□□□□ -0.8
LCT-202ENST00000452974 CEP164Q9UPV0 1460 aa10.05□□□□□ -0.8
LCT-202ENST00000452974 FBLN2P98095 1184 aa10.04□□□□□ -0.8
LCT-202ENST00000452974 FANCD2Q9BXW9 1451 aa10.04□□□□□ -0.8
LCT-202ENST00000452974 RAPGEF2Q9Y4G8 1499 aa10.03□□□□□ -0.8
LCT-202ENST00000452974 TDRD9Q8NDG6 1382 aaKnown RBP10.01□□□□□ -0.81
LCT-202ENST00000452974 ACIN1Q9UKV3 1341 aaKnown RBP10□□□□□ -0.81
LCT-202ENST00000452974 ARID3CA6NKF2 412 aa9.99□□□□□ -0.81
LCT-202ENST00000452974 CUX1P39880 1505 aa9.99□□□□□ -0.81
LCT-202ENST00000452974 CARMIL1Q5VZK9 1371 aa9.98□□□□□ -0.81
LCT-202ENST00000452974 PDS5BQ9NTI5 1447 aa9.98□□□□□ -0.81
LCT-202ENST00000452974 RAD54L2Q9Y4B4 1467 aa9.97□□□□□ -0.81
LCT-202ENST00000452974 PLPPR3Q6T4P5 718 aa9.96□□□□□ -0.81
LCT-202ENST00000452974 FGD5Q6ZNL6 1462 aa9.96□□□□□ -0.81
LCT-202ENST00000452974 GTF3C3Q9Y5Q9 886 aa9.96□□□□□ -0.82
LCT-202ENST00000452974 IGF1RP08069 1367 aa9.94□□□□□ -0.82
LCT-202ENST00000452974 ERCC6Q03468 1493 aa9.93□□□□□ -0.82
LCT-202ENST00000452974 TOP2BQ02880 1626 aa9.93□□□□□ -0.82
LCT-202ENST00000452974 ZEB1P37275 1124 aaPredicted RBP9.93□□□□□ -0.82
LCT-202ENST00000452974 NEUROD1Q13562 356 aa9.92□□□□□ -0.82
LCT-202ENST00000452974 FAM50AQ14320 339 aaKnown RBP9.9□□□□□ -0.82
LCT-202ENST00000452974 KANK4Q5T7N3 995 aaPredicted RBP9.89□□□□□ -0.83
LCT-202ENST00000452974 CHMP7Q8WUX9 453 aaPredicted RBP9.87□□□□□ -0.83
LCT-202ENST00000452974 TOPBP1Q92547 1522 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms