RNA–Protein interactions for RNA: ENST00000449552.6

TRIM16L-204, Transcript of tripartite motif containing 16 like, humanhuman

TSL 2

Gene TRIM16L, Length 3,189 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16L-204ENST00000449552 NISCHQ9Y2I1 1504 aa17.43■□□□□ 0.38
TRIM16L-204ENST00000449552 SHROOM4Q9ULL8 1493 aa15.39■□□□□ 0.05
TRIM16L-204ENST00000449552 DCAF8L2P0C7V8 631 aa15.31■□□□□ 0.04
TRIM16L-204ENST00000449552 SUPT5HO00267 1087 aaKnown RBP15.02□□□□□ -0.01
TRIM16L-204ENST00000449552 ZCCHC6Q5VYS8 1495 aaKnown RBP14.64□□□□□ -0.07
TRIM16L-204ENST00000449552 CCDC180Q9P1Z9 1646 aa14.57□□□□□ -0.08
TRIM16L-204ENST00000449552 PELP1Q8IZL8 1130 aaKnown RBP14.36□□□□□ -0.11
TRIM16L-204ENST00000449552 ABCC9O60706 1549 aa14.33□□□□□ -0.12
TRIM16L-204ENST00000449552 CHIC1Q5VXU3 224 aa14.22□□□□□ -0.13
TRIM16L-204ENST00000449552 EHMT2Q96KQ7 1210 aa14.13□□□□□ -0.15
TRIM16L-204ENST00000449552 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
TRIM16L-204ENST00000449552 MYT1Q01538 1121 aa14.11□□□□□ -0.15
TRIM16L-204ENST00000449552 MYO15BQ96JP2 1530 aa14.08□□□□□ -0.16
TRIM16L-204ENST00000449552 LOC105371045A0A1W2PR82 267 aa14.04□□□□□ -0.16
TRIM16L-204ENST00000449552 FAM9AQ8IZU1 332 aaPredicted RBP13.99□□□□□ -0.17
TRIM16L-204ENST00000449552 DCAF1Q9Y4B6 1507 aa13.99□□□□□ -0.17
TRIM16L-204ENST00000449552 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRIM16L-204ENST00000449552 RSF1Q96T23 1441 aaPredicted RBP13.85□□□□□ -0.19
TRIM16L-204ENST00000449552 CECR2Q9BXF3 1484 aa13.85□□□□□ -0.19
TRIM16L-204ENST00000449552 PCGF6Q9BYE7 350 aa13.83□□□□□ -0.19
TRIM16L-204ENST00000449552 TRIM41Q8WV44 630 aa13.81□□□□□ -0.2
TRIM16L-204ENST00000449552 RB1CC1Q8TDY2 1594 aa13.69□□□□□ -0.22
TRIM16L-204ENST00000449552 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
TRIM16L-204ENST00000449552 NACADO15069 1562 aa13.67□□□□□ -0.22
TRIM16L-204ENST00000449552 PPARGC1BQ86YN6 1023 aaKnown RBP13.65□□□□□ -0.22
TRIM16L-204ENST00000449552 TTBK1Q5TCY1 1321 aaPredicted RBP13.56□□□□□ -0.24
TRIM16L-204ENST00000449552 WIZO95785 1651 aa13.56□□□□□ -0.24
TRIM16L-204ENST00000449552 HRCP23327 699 aa13.45□□□□□ -0.26
TRIM16L-204ENST00000449552 RANGAP1P46060 587 aaPredicted RBP13.39□□□□□ -0.27
TRIM16L-204ENST00000449552 BAZ1AQ9NRL2 1556 aaPredicted RBP13.35□□□□□ -0.27
TRIM16L-204ENST00000449552 ABCC8Q09428 1581 aa13.34□□□□□ -0.27
TRIM16L-204ENST00000449552 TRIM26Q12899 539 aaPredicted RBP13.32□□□□□ -0.28
TRIM16L-204ENST00000449552 CCDC88BA6NC98 1476 aa13.32□□□□□ -0.28
TRIM16L-204ENST00000449552 PRKCSHP14314 528 aaPredicted RBP13.28□□□□□ -0.28
TRIM16L-204ENST00000449552 UBTFP17480 764 aaKnown RBP13.28□□□□□ -0.28
TRIM16L-204ENST00000449552 UNC13AQ9UPW8 1703 aa13.27□□□□□ -0.29
TRIM16L-204ENST00000449552 SMARCA4P51532 1647 aa13.27□□□□□ -0.29
TRIM16L-204ENST00000449552 BICRAQ9NZM4 1560 aa13.23□□□□□ -0.29
TRIM16L-204ENST00000449552 SOGA1O94964 1423 aa13.23□□□□□ -0.29
TRIM16L-204ENST00000449552 TOP2AP11388 1531 aaKnown RBP13.19□□□□□ -0.3
TRIM16L-204ENST00000449552 RUSC2Q8N2Y8 1516 aa13.18□□□□□ -0.3
TRIM16L-204ENST00000449552 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
TRIM16L-204ENST00000449552 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
TRIM16L-204ENST00000449552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.12□□□□□ -0.31
TRIM16L-204ENST00000449552 CSRNP3Q8WYN3 585 aa13.12□□□□□ -0.31
TRIM16L-204ENST00000449552 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
TRIM16L-204ENST00000449552 ATAD2BQ9ULI0 1458 aa13.08□□□□□ -0.32
TRIM16L-204ENST00000449552 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
TRIM16L-204ENST00000449552 EIF4G1Q04637 1599 aaKnown RBP13.03□□□□□ -0.32
TRIM16L-204ENST00000449552 BCL11AQ9H165 835 aa13.02□□□□□ -0.33
TRIM16L-204ENST00000449552 CCER1Q8TC90 406 aaPredicted RBP13□□□□□ -0.33
TRIM16L-204ENST00000449552 CEP162Q5TB80 1403 aa12.99□□□□□ -0.33
TRIM16L-204ENST00000449552 ERICH6Q7L0X2 663 aa12.96□□□□□ -0.33
TRIM16L-204ENST00000449552 HNRNPUL2Q1KMD3 747 aaKnown RBP12.95□□□□□ -0.34
TRIM16L-204ENST00000449552 APLP2Q06481 763 aa12.93□□□□□ -0.34
TRIM16L-204ENST00000449552 SYNJ1O43426 1573 aa12.92□□□□□ -0.34
TRIM16L-204ENST00000449552 DNAJC5BQ9UF47 199 aa12.87□□□□□ -0.35
TRIM16L-204ENST00000449552 TNIKQ9UKE5 1360 aa12.87□□□□□ -0.35
TRIM16L-204ENST00000449552 RAPGEF2Q9Y4G8 1499 aa12.84□□□□□ -0.35
TRIM16L-204ENST00000449552 GOLGA3Q08378 1498 aa12.83□□□□□ -0.36
TRIM16L-204ENST00000449552 PEG3Q9GZU2 1588 aa12.82□□□□□ -0.36
TRIM16L-204ENST00000449552 ATP1B4Q9UN42 357 aaPredicted RBP12.81□□□□□ -0.36
TRIM16L-204ENST00000449552 P3H3Q8IVL6 736 aa12.81□□□□□ -0.36
TRIM16L-204ENST00000449552 CLIP1P30622 1438 aa12.81□□□□□ -0.36
TRIM16L-204ENST00000449552 ZEB1P37275 1124 aaPredicted RBP12.8□□□□□ -0.36
TRIM16L-204ENST00000449552 ITGAEP38570 1179 aa12.8□□□□□ -0.36
TRIM16L-204ENST00000449552 EEA1Q15075 1411 aa12.76□□□□□ -0.37
TRIM16L-204ENST00000449552 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
TRIM16L-204ENST00000449552 CEP164Q9UPV0 1460 aa12.75□□□□□ -0.37
TRIM16L-204ENST00000449552 SLC24A1O60721 1099 aa12.72□□□□□ -0.37
TRIM16L-204ENST00000449552 KANK4Q5T7N3 995 aaPredicted RBP12.71□□□□□ -0.37
TRIM16L-204ENST00000449552 CUX1P39880 1505 aa12.7□□□□□ -0.38
TRIM16L-204ENST00000449552 NESP48681 1621 aa12.67□□□□□ -0.38
TRIM16L-204ENST00000449552 CUX2O14529 1486 aa12.66□□□□□ -0.38
TRIM16L-204ENST00000449552 CENPBP07199 599 aaPredicted RBP12.65□□□□□ -0.38
TRIM16L-204ENST00000449552 CADPSQ9ULU8 1353 aa12.65□□□□□ -0.38
TRIM16L-204ENST00000449552 CFTRP13569 1480 aa12.64□□□□□ -0.39
TRIM16L-204ENST00000449552 KIF27Q86VH2 1401 aa12.64□□□□□ -0.39
TRIM16L-204ENST00000449552 CC2D2AQ9P2K1 1620 aa12.63□□□□□ -0.39
TRIM16L-204ENST00000449552 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
TRIM16L-204ENST00000449552 HMGXB3Q12766 1538 aa12.62□□□□□ -0.39
TRIM16L-204ENST00000449552 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
TRIM16L-204ENST00000449552 ARID3CA6NKF2 412 aa12.6□□□□□ -0.39
TRIM16L-204ENST00000449552 RAD54L2Q9Y4B4 1467 aa12.59□□□□□ -0.39
TRIM16L-204ENST00000449552 KIF21BO75037 1637 aa12.58□□□□□ -0.39
TRIM16L-204ENST00000449552 IGF1RP08069 1367 aa12.57□□□□□ -0.4
TRIM16L-204ENST00000449552 ACIN1Q9UKV3 1341 aaKnown RBP12.57□□□□□ -0.4
TRIM16L-204ENST00000449552 FGD5Q6ZNL6 1462 aa12.56□□□□□ -0.4
TRIM16L-204ENST00000449552 ARAP1Q96P48 1450 aa12.56□□□□□ -0.4
TRIM16L-204ENST00000449552 PRXQ9BXM0 1461 aa12.55□□□□□ -0.4
TRIM16L-204ENST00000449552 DIEXFQ68CQ4 756 aaKnown RBP12.55□□□□□ -0.4
TRIM16L-204ENST00000449552 YTHDC1Q96MU7 727 aaKnown RBP12.55□□□□□ -0.4
TRIM16L-204ENST00000449552 CARMIL1Q5VZK9 1371 aa12.55□□□□□ -0.4
TRIM16L-204ENST00000449552 TDRD9Q8NDG6 1382 aaKnown RBP12.55□□□□□ -0.4
TRIM16L-204ENST00000449552 NEUROD1Q13562 356 aa12.55□□□□□ -0.4
TRIM16L-204ENST00000449552 FANCD2Q9BXW9 1451 aa12.55□□□□□ -0.4
TRIM16L-204ENST00000449552 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
TRIM16L-204ENST00000449552 FAM50AQ14320 339 aaKnown RBP12.53□□□□□ -0.4
TRIM16L-204ENST00000449552 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
TRIM16L-204ENST00000449552 ARHGAP35Q9NRY4 1499 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms